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3RK6
Asym. Unit
Info
Asym.Unit (85 KB)
Biol.Unit 1 (41 KB)
Biol.Unit 2 (41 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF THE MIDDLE DOMAIN OF HUMAN PAIP1
Authors
:
J. Lei, J. R. Mesters, R. Hilgenfeld
Date
:
17 Apr 11 (Deposition) - 18 May 11 (Release) - 08 Jun 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.00
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Keywords
:
Heat Fold, Pabp, Eif4A, Eif3, Translation Regulator
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
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Reference
:
J. Lei, J. R. Mesters, A. Brunn, R. Hilgenfeld
Crystal Structure Of The Middle Domain Of Human Poly(A)-Binding Protein-Interacting Protein 1.
Biochem. Biophys. Res. Commun. V. 408 680 2011
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Hetero Components
(0, 0)
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Sites
(0, 0)
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PROSITE Patterns/Profiles
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Exons
(6, 12)
Info
All Exons
Exon 1.5 (A:78-128 | B:78-128)
Exon 1.6b (A:129-166 | B:129-166)
Exon 1.7b (A:166-203 | B:166-203)
Exon 1.8b (A:204-245 | B:204-245)
Exon 1.9 (A:246-281 | B:246-281)
Exon 1.10 (A:281-294 | B:281-294)
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All Exon Boundaries
1: Boundary 1.4a/1.5
2: Boundary 1.5/1.6b
3: Boundary 1.6b/1.7b
4: Boundary 1.7b/1.8b
5: Boundary 1.8b/1.9
6: Boundary 1.9/1.10
7: Boundary 1.10/1.11
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.2b
ENST00000306846
2b
ENSE00002201985
chr5:
43557181-43556684
498
PAIP1_HUMAN
1-89
89
0
-
-
1.4a
ENST00000306846
4a
ENSE00001687835
chr5:
43556101-43555932
170
PAIP1_HUMAN
89-145
57
0
-
-
1.5
ENST00000306846
5
ENSE00002199905
chr5:
43548015-43547830
186
PAIP1_HUMAN
146-207
62
2
A:78-128
B:78-128
51
51
1.6b
ENST00000306846
6b
ENSE00001175015
chr5:
43543218-43543106
113
PAIP1_HUMAN
208-245
38
2
A:129-166
B:129-166
38
38
1.7b
ENST00000306846
7b
ENSE00001175008
chr5:
43539137-43539026
112
PAIP1_HUMAN
245-282
38
2
A:166-203
B:166-203
38
38
1.8b
ENST00000306846
8b
ENSE00001174998
chr5:
43537046-43536921
126
PAIP1_HUMAN
283-324
42
2
A:204-245
B:204-245
42
42
1.9
ENST00000306846
9
ENSE00001174992
chr5:
43535742-43535636
107
PAIP1_HUMAN
325-360
36
2
A:246-281
B:246-281
36
36
1.10
ENST00000306846
10
ENSE00001174982
chr5:
43535072-43534955
118
PAIP1_HUMAN
360-399
40
2
A:281-294
B:281-294
14
14
1.11
ENST00000306846
11
ENSE00001174974
chr5:
43533894-43533840
55
PAIP1_HUMAN
400-418
19
0
-
-
1.12b
ENST00000306846
12b
ENSE00001174964
chr5:
43529981-43529888
94
PAIP1_HUMAN
418-449
32
0
-
-
1.13f
ENST00000306846
13f
ENSE00001148824
chr5:
43527571-43526369
1203
PAIP1_HUMAN
449-479
31
0
-
-
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SCOP Domains
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CATH Domains
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Pfam Domains
(1, 2)
Info
all PFAM domains
1a: PFAM_MIF4G_3rk6B01 (B:80-294)
1b: PFAM_MIF4G_3rk6B02 (B:80-294)
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Clan
:
TPR
(230)
Family
:
MIF4G
(5)
Homo sapiens (Human)
(3)
1a
MIF4G-3rk6B01
B:80-294
1b
MIF4G-3rk6B02
B:80-294
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Asym.Unit (85 KB)
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