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3RJ1
Biol. Unit 1
Info
Asym.Unit (812 KB)
Biol.Unit 1 (260 KB)
Biol.Unit 2 (258 KB)
Biol.Unit 3 (259 KB)
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(1)
Title
:
ARCHITECTURE OF THE MEDIATOR HEAD MODULE
Authors
:
T. Imasaki, G. Calero, G. Cai, K. L. Tsai, K. Yamada, F. Cardelli, H. Erdj Bromage, P. Tempst, I. Berger, G. L. Kornberg, F. J. Asturias, R. D. Kor Y. Takagi
Date
:
14 Apr 11 (Deposition) - 27 Jul 11 (Release) - 27 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
4.30
Chains
:
Asym. Unit : A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U
Biol. Unit 1: A,B,C,D,E,F,G (1x)
Biol. Unit 2: H,I,J,K,L,M,N (1x)
Biol. Unit 3: O,P,Q,R,S,T,U (1x)
Keywords
:
Mediator, Rna Polymeras Ii, Pol Ii, Rnap, Med, Head Module, Mediator Head, Regulator, Helical Bundle, Transcriptional Regulation, Rna Polymerase Ii, Tbp, Nucleus, Transcription
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
T. Imasaki, G. Calero, G. Cai, K. L. Tsai, K. Yamada, F. Cardelli, H. Erdjument-Bromage, P. Tempst, I. Berger, G. L. Kornberg, F. J. Asturias, R. D. Kornberg, Y. Takagi
Architecture Of The Mediator Head Module.
Nature V. 475 240 2011
[
close entry info
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Hetero Components
(1, 33)
Info
All Hetero Components
1a: SELENOMETHIONINE (MSEa)
1aa: SELENOMETHIONINE (MSEaa)
1ab: SELENOMETHIONINE (MSEab)
1ac: SELENOMETHIONINE (MSEac)
1ad: SELENOMETHIONINE (MSEad)
1ae: SELENOMETHIONINE (MSEae)
1af: SELENOMETHIONINE (MSEaf)
1ag: SELENOMETHIONINE (MSEag)
1ah: SELENOMETHIONINE (MSEah)
1ai: SELENOMETHIONINE (MSEai)
1aj: SELENOMETHIONINE (MSEaj)
1ak: SELENOMETHIONINE (MSEak)
1al: SELENOMETHIONINE (MSEal)
1am: SELENOMETHIONINE (MSEam)
1an: SELENOMETHIONINE (MSEan)
1ao: SELENOMETHIONINE (MSEao)
1ap: SELENOMETHIONINE (MSEap)
1aq: SELENOMETHIONINE (MSEaq)
1ar: SELENOMETHIONINE (MSEar)
1as: SELENOMETHIONINE (MSEas)
1at: SELENOMETHIONINE (MSEat)
1au: SELENOMETHIONINE (MSEau)
1av: SELENOMETHIONINE (MSEav)
1aw: SELENOMETHIONINE (MSEaw)
1ax: SELENOMETHIONINE (MSEax)
1ay: SELENOMETHIONINE (MSEay)
1az: SELENOMETHIONINE (MSEaz)
1b: SELENOMETHIONINE (MSEb)
1ba: SELENOMETHIONINE (MSEba)
1bb: SELENOMETHIONINE (MSEbb)
1bc: SELENOMETHIONINE (MSEbc)
1bd: SELENOMETHIONINE (MSEbd)
1be: SELENOMETHIONINE (MSEbe)
1bf: SELENOMETHIONINE (MSEbf)
1bg: SELENOMETHIONINE (MSEbg)
1bh: SELENOMETHIONINE (MSEbh)
1bi: SELENOMETHIONINE (MSEbi)
1bj: SELENOMETHIONINE (MSEbj)
1bk: SELENOMETHIONINE (MSEbk)
1bl: SELENOMETHIONINE (MSEbl)
1bm: SELENOMETHIONINE (MSEbm)
1bn: SELENOMETHIONINE (MSEbn)
1bo: SELENOMETHIONINE (MSEbo)
1bp: SELENOMETHIONINE (MSEbp)
1bq: SELENOMETHIONINE (MSEbq)
1br: SELENOMETHIONINE (MSEbr)
1bs: SELENOMETHIONINE (MSEbs)
1bt: SELENOMETHIONINE (MSEbt)
1bu: SELENOMETHIONINE (MSEbu)
1bv: SELENOMETHIONINE (MSEbv)
1bw: SELENOMETHIONINE (MSEbw)
1bx: SELENOMETHIONINE (MSEbx)
1by: SELENOMETHIONINE (MSEby)
1bz: SELENOMETHIONINE (MSEbz)
1c: SELENOMETHIONINE (MSEc)
1ca: SELENOMETHIONINE (MSEca)
1cb: SELENOMETHIONINE (MSEcb)
1cc: SELENOMETHIONINE (MSEcc)
1cd: SELENOMETHIONINE (MSEcd)
1ce: SELENOMETHIONINE (MSEce)
1cf: SELENOMETHIONINE (MSEcf)
1cg: SELENOMETHIONINE (MSEcg)
1ch: SELENOMETHIONINE (MSEch)
1ci: SELENOMETHIONINE (MSEci)
1cj: SELENOMETHIONINE (MSEcj)
1ck: SELENOMETHIONINE (MSEck)
1cl: SELENOMETHIONINE (MSEcl)
1cm: SELENOMETHIONINE (MSEcm)
1cn: SELENOMETHIONINE (MSEcn)
1co: SELENOMETHIONINE (MSEco)
1cp: SELENOMETHIONINE (MSEcp)
1cq: SELENOMETHIONINE (MSEcq)
1cr: SELENOMETHIONINE (MSEcr)
1cs: SELENOMETHIONINE (MSEcs)
1ct: SELENOMETHIONINE (MSEct)
1cu: SELENOMETHIONINE (MSEcu)
1d: SELENOMETHIONINE (MSEd)
1e: SELENOMETHIONINE (MSEe)
1f: SELENOMETHIONINE (MSEf)
1g: SELENOMETHIONINE (MSEg)
1h: SELENOMETHIONINE (MSEh)
1i: SELENOMETHIONINE (MSEi)
1j: SELENOMETHIONINE (MSEj)
1k: SELENOMETHIONINE (MSEk)
1l: SELENOMETHIONINE (MSEl)
1m: SELENOMETHIONINE (MSEm)
1n: SELENOMETHIONINE (MSEn)
1o: SELENOMETHIONINE (MSEo)
1p: SELENOMETHIONINE (MSEp)
1q: SELENOMETHIONINE (MSEq)
1r: SELENOMETHIONINE (MSEr)
1s: SELENOMETHIONINE (MSEs)
1t: SELENOMETHIONINE (MSEt)
1u: SELENOMETHIONINE (MSEu)
1v: SELENOMETHIONINE (MSEv)
1w: SELENOMETHIONINE (MSEw)
1x: SELENOMETHIONINE (MSEx)
1y: SELENOMETHIONINE (MSEy)
1z: SELENOMETHIONINE (MSEz)
2a: SELENIUM ATOM (SEa)
2aa: SELENIUM ATOM (SEaa)
2ab: SELENIUM ATOM (SEab)
2ac: SELENIUM ATOM (SEac)
2ad: SELENIUM ATOM (SEad)
2ae: SELENIUM ATOM (SEae)
2af: SELENIUM ATOM (SEaf)
2ag: SELENIUM ATOM (SEag)
2ah: SELENIUM ATOM (SEah)
2ai: SELENIUM ATOM (SEai)
2aj: SELENIUM ATOM (SEaj)
2ak: SELENIUM ATOM (SEak)
2al: SELENIUM ATOM (SEal)
2am: SELENIUM ATOM (SEam)
2an: SELENIUM ATOM (SEan)
2ao: SELENIUM ATOM (SEao)
2ap: SELENIUM ATOM (SEap)
2aq: SELENIUM ATOM (SEaq)
2ar: SELENIUM ATOM (SEar)
2as: SELENIUM ATOM (SEas)
2at: SELENIUM ATOM (SEat)
2au: SELENIUM ATOM (SEau)
2av: SELENIUM ATOM (SEav)
2aw: SELENIUM ATOM (SEaw)
2ax: SELENIUM ATOM (SEax)
2ay: SELENIUM ATOM (SEay)
2az: SELENIUM ATOM (SEaz)
2b: SELENIUM ATOM (SEb)
2ba: SELENIUM ATOM (SEba)
2bb: SELENIUM ATOM (SEbb)
2bc: SELENIUM ATOM (SEbc)
2bd: SELENIUM ATOM (SEbd)
2be: SELENIUM ATOM (SEbe)
2bf: SELENIUM ATOM (SEbf)
2bg: SELENIUM ATOM (SEbg)
2bh: SELENIUM ATOM (SEbh)
2bi: SELENIUM ATOM (SEbi)
2bj: SELENIUM ATOM (SEbj)
2bk: SELENIUM ATOM (SEbk)
2bl: SELENIUM ATOM (SEbl)
2bm: SELENIUM ATOM (SEbm)
2bn: SELENIUM ATOM (SEbn)
2bo: SELENIUM ATOM (SEbo)
2bp: SELENIUM ATOM (SEbp)
2bq: SELENIUM ATOM (SEbq)
2br: SELENIUM ATOM (SEbr)
2bs: SELENIUM ATOM (SEbs)
2bt: SELENIUM ATOM (SEbt)
2bu: SELENIUM ATOM (SEbu)
2bv: SELENIUM ATOM (SEbv)
2bw: SELENIUM ATOM (SEbw)
2bx: SELENIUM ATOM (SEbx)
2by: SELENIUM ATOM (SEby)
2bz: SELENIUM ATOM (SEbz)
2c: SELENIUM ATOM (SEc)
2ca: SELENIUM ATOM (SEca)
2cb: SELENIUM ATOM (SEcb)
2cc: SELENIUM ATOM (SEcc)
2cd: SELENIUM ATOM (SEcd)
2ce: SELENIUM ATOM (SEce)
2cf: SELENIUM ATOM (SEcf)
2cg: SELENIUM ATOM (SEcg)
2ch: SELENIUM ATOM (SEch)
2ci: SELENIUM ATOM (SEci)
2cj: SELENIUM ATOM (SEcj)
2ck: SELENIUM ATOM (SEck)
2cl: SELENIUM ATOM (SEcl)
2cm: SELENIUM ATOM (SEcm)
2cn: SELENIUM ATOM (SEcn)
2co: SELENIUM ATOM (SEco)
2cp: SELENIUM ATOM (SEcp)
2cq: SELENIUM ATOM (SEcq)
2cr: SELENIUM ATOM (SEcr)
2cs: SELENIUM ATOM (SEcs)
2ct: SELENIUM ATOM (SEct)
2d: SELENIUM ATOM (SEd)
2e: SELENIUM ATOM (SEe)
2f: SELENIUM ATOM (SEf)
2g: SELENIUM ATOM (SEg)
2h: SELENIUM ATOM (SEh)
2i: SELENIUM ATOM (SEi)
2j: SELENIUM ATOM (SEj)
2k: SELENIUM ATOM (SEk)
2l: SELENIUM ATOM (SEl)
2m: SELENIUM ATOM (SEm)
2n: SELENIUM ATOM (SEn)
2o: SELENIUM ATOM (SEo)
2p: SELENIUM ATOM (SEp)
2q: SELENIUM ATOM (SEq)
2r: SELENIUM ATOM (SEr)
2s: SELENIUM ATOM (SEs)
2t: SELENIUM ATOM (SEt)
2u: SELENIUM ATOM (SEu)
2v: SELENIUM ATOM (SEv)
2w: SELENIUM ATOM (SEw)
2x: SELENIUM ATOM (SEx)
2y: SELENIUM ATOM (SEy)
2z: SELENIUM ATOM (SEz)
3a: (UNKa)
3aa: (UNKaa)
3ab: (UNKab)
3ac: (UNKac)
3ad: (UNKad)
3ae: (UNKae)
3af: (UNKaf)
3ag: (UNKag)
3ah: (UNKah)
3ai: (UNKai)
3aj: (UNKaj)
3ak: (UNKak)
3al: (UNKal)
3am: (UNKam)
3an: (UNKan)
3ao: (UNKao)
3ap: (UNKap)
3aq: (UNKaq)
3ar: (UNKar)
3as: (UNKas)
3at: (UNKat)
3au: (UNKau)
3av: (UNKav)
3aw: (UNKaw)
3ax: (UNKax)
3ay: (UNKay)
3az: (UNKaz)
3b: (UNKb)
3ba: (UNKba)
3bb: (UNKbb)
3bc: (UNKbc)
3bd: (UNKbd)
3be: (UNKbe)
3bf: (UNKbf)
3bg: (UNKbg)
3bh: (UNKbh)
3bi: (UNKbi)
3bj: (UNKbj)
3bk: (UNKbk)
3bl: (UNKbl)
3bm: (UNKbm)
3bn: (UNKbn)
3bo: (UNKbo)
3bp: (UNKbp)
3bq: (UNKbq)
3br: (UNKbr)
3bs: (UNKbs)
3bt: (UNKbt)
3bu: (UNKbu)
3bv: (UNKbv)
3bw: (UNKbw)
3bx: (UNKbx)
3by: (UNKby)
3bz: (UNKbz)
3c: (UNKc)
3ca: (UNKca)
3cb: (UNKcb)
3cc: (UNKcc)
3cd: (UNKcd)
3ce: (UNKce)
3cf: (UNKcf)
3cg: (UNKcg)
3ch: (UNKch)
3ci: (UNKci)
3cj: (UNKcj)
3ck: (UNKck)
3cl: (UNKcl)
3cm: (UNKcm)
3cn: (UNKcn)
3co: (UNKco)
3cp: (UNKcp)
3cq: (UNKcq)
3cr: (UNKcr)
3cs: (UNKcs)
3ct: (UNKct)
3cu: (UNKcu)
3cv: (UNKcv)
3cw: (UNKcw)
3cx: (UNKcx)
3cy: (UNKcy)
3cz: (UNKcz)
3d: (UNKd)
3da: (UNKda)
3db: (UNKdb)
3dc: (UNKdc)
3dd: (UNKdd)
3de: (UNKde)
3df: (UNKdf)
3dg: (UNKdg)
3dh: (UNKdh)
3di: (UNKdi)
3dj: (UNKdj)
3dk: (UNKdk)
3dl: (UNKdl)
3dm: (UNKdm)
3dn: (UNKdn)
3do: (UNKdo)
3dp: (UNKdp)
3dq: (UNKdq)
3dr: (UNKdr)
3ds: (UNKds)
3dt: (UNKdt)
3du: (UNKdu)
3dv: (UNKdv)
3dw: (UNKdw)
3dx: (UNKdx)
3dy: (UNKdy)
3dz: (UNKdz)
3e: (UNKe)
3ea: (UNKea)
3eb: (UNKeb)
3ec: (UNKec)
3ed: (UNKed)
3ee: (UNKee)
3f: (UNKf)
3g: (UNKg)
3h: (UNKh)
3i: (UNKi)
3j: (UNKj)
3k: (UNKk)
3l: (UNKl)
3m: (UNKm)
3n: (UNKn)
3o: (UNKo)
3p: (UNKp)
3q: (UNKq)
3r: (UNKr)
3s: (UNKs)
3t: (UNKt)
3u: (UNKu)
3v: (UNKv)
3w: (UNKw)
3x: (UNKx)
3y: (UNKy)
3z: (UNKz)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
MSE
33
Mod. Amino Acid
SELENOMETHIONINE
2
SE
-1
Ligand/Ion
SELENIUM ATOM
3
UNK
-1
Mod. Amino Acid
[
close Hetero Component info
]
Sites
(17, 17)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
17: BC8 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
MSE A:114
BINDING SITE FOR RESIDUE SE A 133
02
AC2
SOFTWARE
MSE B:207 , THR G:184 , LEU G:188
BINDING SITE FOR RESIDUE SE B 1728
03
AC3
SOFTWARE
LEU B:229
BINDING SITE FOR RESIDUE SE B 1729
04
AC4
SOFTWARE
MSE B:238 , SER B:239 , SER B:242
BINDING SITE FOR RESIDUE SE B 1730
05
AC5
SOFTWARE
LEU B:510
BINDING SITE FOR RESIDUE SE B 1732
06
AC6
SOFTWARE
GLU B:440
BINDING SITE FOR RESIDUE SE B 903
07
AC7
SOFTWARE
SER B:480
BINDING SITE FOR RESIDUE SE B 904
08
AC8
SOFTWARE
ARG C:51
BINDING SITE FOR RESIDUE SE C 224
09
AC9
SOFTWARE
MSE C:38
BINDING SITE FOR RESIDUE SE C 225
10
BC1
SOFTWARE
MSE C:54
BINDING SITE FOR RESIDUE SE C 226
11
BC2
SOFTWARE
THR D:28 , MSE D:57
BINDING SITE FOR RESIDUE SE D 222
12
BC3
SOFTWARE
MSE D:56 , ASN D:60
BINDING SITE FOR RESIDUE SE D 223
13
BC4
SOFTWARE
MSE E:182
BINDING SITE FOR RESIDUE SE E 409
14
BC5
SOFTWARE
TRP E:41 , MSE E:204 , TYR E:209
BINDING SITE FOR RESIDUE SE E 410
15
BC6
SOFTWARE
SER E:27
BINDING SITE FOR RESIDUE SE E 411
16
BC7
SOFTWARE
MSE G:101
BINDING SITE FOR RESIDUE SE G 1299
17
BC8
SOFTWARE
LEU D:48 , MSE G:175
BINDING SITE FOR RESIDUE SE D 1301
[
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]
SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are only available for the asymmetric unit)
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PROSITE Patterns/Profiles
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Exons
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
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CATH Domains
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Pfam Domains
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Asymmetric Unit 1
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