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3RJ1
Asym. Unit
Info
Asym.Unit (812 KB)
Biol.Unit 1 (260 KB)
Biol.Unit 2 (258 KB)
Biol.Unit 3 (259 KB)
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(1)
Title
:
ARCHITECTURE OF THE MEDIATOR HEAD MODULE
Authors
:
T. Imasaki, G. Calero, G. Cai, K. L. Tsai, K. Yamada, F. Cardelli, H. Erdj Bromage, P. Tempst, I. Berger, G. L. Kornberg, F. J. Asturias, R. D. Kor Y. Takagi
Date
:
14 Apr 11 (Deposition) - 27 Jul 11 (Release) - 27 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
4.30
Chains
:
Asym. Unit : A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U
Biol. Unit 1: A,B,C,D,E,F,G (1x)
Biol. Unit 2: H,I,J,K,L,M,N (1x)
Biol. Unit 3: O,P,Q,R,S,T,U (1x)
Keywords
:
Mediator, Rna Polymeras Ii, Pol Ii, Rnap, Med, Head Module, Mediator Head, Regulator, Helical Bundle, Transcriptional Regulation, Rna Polymerase Ii, Tbp, Nucleus, Transcription
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
T. Imasaki, G. Calero, G. Cai, K. L. Tsai, K. Yamada, F. Cardelli, H. Erdjument-Bromage, P. Tempst, I. Berger, G. L. Kornberg, F. J. Asturias, R. D. Kornberg, Y. Takagi
Architecture Of The Mediator Head Module.
Nature V. 475 240 2011
[
close entry info
]
Hetero Components
(3, 332)
Info
All Hetero Components
1a: SELENOMETHIONINE (MSEa)
1aa: SELENOMETHIONINE (MSEaa)
1ab: SELENOMETHIONINE (MSEab)
1ac: SELENOMETHIONINE (MSEac)
1ad: SELENOMETHIONINE (MSEad)
1ae: SELENOMETHIONINE (MSEae)
1af: SELENOMETHIONINE (MSEaf)
1ag: SELENOMETHIONINE (MSEag)
1ah: SELENOMETHIONINE (MSEah)
1ai: SELENOMETHIONINE (MSEai)
1aj: SELENOMETHIONINE (MSEaj)
1ak: SELENOMETHIONINE (MSEak)
1al: SELENOMETHIONINE (MSEal)
1am: SELENOMETHIONINE (MSEam)
1an: SELENOMETHIONINE (MSEan)
1ao: SELENOMETHIONINE (MSEao)
1ap: SELENOMETHIONINE (MSEap)
1aq: SELENOMETHIONINE (MSEaq)
1ar: SELENOMETHIONINE (MSEar)
1as: SELENOMETHIONINE (MSEas)
1at: SELENOMETHIONINE (MSEat)
1au: SELENOMETHIONINE (MSEau)
1av: SELENOMETHIONINE (MSEav)
1aw: SELENOMETHIONINE (MSEaw)
1ax: SELENOMETHIONINE (MSEax)
1ay: SELENOMETHIONINE (MSEay)
1az: SELENOMETHIONINE (MSEaz)
1b: SELENOMETHIONINE (MSEb)
1ba: SELENOMETHIONINE (MSEba)
1bb: SELENOMETHIONINE (MSEbb)
1bc: SELENOMETHIONINE (MSEbc)
1bd: SELENOMETHIONINE (MSEbd)
1be: SELENOMETHIONINE (MSEbe)
1bf: SELENOMETHIONINE (MSEbf)
1bg: SELENOMETHIONINE (MSEbg)
1bh: SELENOMETHIONINE (MSEbh)
1bi: SELENOMETHIONINE (MSEbi)
1bj: SELENOMETHIONINE (MSEbj)
1bk: SELENOMETHIONINE (MSEbk)
1bl: SELENOMETHIONINE (MSEbl)
1bm: SELENOMETHIONINE (MSEbm)
1bn: SELENOMETHIONINE (MSEbn)
1bo: SELENOMETHIONINE (MSEbo)
1bp: SELENOMETHIONINE (MSEbp)
1bq: SELENOMETHIONINE (MSEbq)
1br: SELENOMETHIONINE (MSEbr)
1bs: SELENOMETHIONINE (MSEbs)
1bt: SELENOMETHIONINE (MSEbt)
1bu: SELENOMETHIONINE (MSEbu)
1bv: SELENOMETHIONINE (MSEbv)
1bw: SELENOMETHIONINE (MSEbw)
1bx: SELENOMETHIONINE (MSEbx)
1by: SELENOMETHIONINE (MSEby)
1bz: SELENOMETHIONINE (MSEbz)
1c: SELENOMETHIONINE (MSEc)
1ca: SELENOMETHIONINE (MSEca)
1cb: SELENOMETHIONINE (MSEcb)
1cc: SELENOMETHIONINE (MSEcc)
1cd: SELENOMETHIONINE (MSEcd)
1ce: SELENOMETHIONINE (MSEce)
1cf: SELENOMETHIONINE (MSEcf)
1cg: SELENOMETHIONINE (MSEcg)
1ch: SELENOMETHIONINE (MSEch)
1ci: SELENOMETHIONINE (MSEci)
1cj: SELENOMETHIONINE (MSEcj)
1ck: SELENOMETHIONINE (MSEck)
1cl: SELENOMETHIONINE (MSEcl)
1cm: SELENOMETHIONINE (MSEcm)
1cn: SELENOMETHIONINE (MSEcn)
1co: SELENOMETHIONINE (MSEco)
1cp: SELENOMETHIONINE (MSEcp)
1cq: SELENOMETHIONINE (MSEcq)
1cr: SELENOMETHIONINE (MSEcr)
1cs: SELENOMETHIONINE (MSEcs)
1ct: SELENOMETHIONINE (MSEct)
1cu: SELENOMETHIONINE (MSEcu)
1d: SELENOMETHIONINE (MSEd)
1e: SELENOMETHIONINE (MSEe)
1f: SELENOMETHIONINE (MSEf)
1g: SELENOMETHIONINE (MSEg)
1h: SELENOMETHIONINE (MSEh)
1i: SELENOMETHIONINE (MSEi)
1j: SELENOMETHIONINE (MSEj)
1k: SELENOMETHIONINE (MSEk)
1l: SELENOMETHIONINE (MSEl)
1m: SELENOMETHIONINE (MSEm)
1n: SELENOMETHIONINE (MSEn)
1o: SELENOMETHIONINE (MSEo)
1p: SELENOMETHIONINE (MSEp)
1q: SELENOMETHIONINE (MSEq)
1r: SELENOMETHIONINE (MSEr)
1s: SELENOMETHIONINE (MSEs)
1t: SELENOMETHIONINE (MSEt)
1u: SELENOMETHIONINE (MSEu)
1v: SELENOMETHIONINE (MSEv)
1w: SELENOMETHIONINE (MSEw)
1x: SELENOMETHIONINE (MSEx)
1y: SELENOMETHIONINE (MSEy)
1z: SELENOMETHIONINE (MSEz)
2a: SELENIUM ATOM (SEa)
2aa: SELENIUM ATOM (SEaa)
2ab: SELENIUM ATOM (SEab)
2ac: SELENIUM ATOM (SEac)
2ad: SELENIUM ATOM (SEad)
2ae: SELENIUM ATOM (SEae)
2af: SELENIUM ATOM (SEaf)
2ag: SELENIUM ATOM (SEag)
2ah: SELENIUM ATOM (SEah)
2ai: SELENIUM ATOM (SEai)
2aj: SELENIUM ATOM (SEaj)
2ak: SELENIUM ATOM (SEak)
2al: SELENIUM ATOM (SEal)
2am: SELENIUM ATOM (SEam)
2an: SELENIUM ATOM (SEan)
2ao: SELENIUM ATOM (SEao)
2ap: SELENIUM ATOM (SEap)
2aq: SELENIUM ATOM (SEaq)
2ar: SELENIUM ATOM (SEar)
2as: SELENIUM ATOM (SEas)
2at: SELENIUM ATOM (SEat)
2au: SELENIUM ATOM (SEau)
2av: SELENIUM ATOM (SEav)
2aw: SELENIUM ATOM (SEaw)
2ax: SELENIUM ATOM (SEax)
2ay: SELENIUM ATOM (SEay)
2az: SELENIUM ATOM (SEaz)
2b: SELENIUM ATOM (SEb)
2ba: SELENIUM ATOM (SEba)
2bb: SELENIUM ATOM (SEbb)
2bc: SELENIUM ATOM (SEbc)
2bd: SELENIUM ATOM (SEbd)
2be: SELENIUM ATOM (SEbe)
2bf: SELENIUM ATOM (SEbf)
2bg: SELENIUM ATOM (SEbg)
2bh: SELENIUM ATOM (SEbh)
2bi: SELENIUM ATOM (SEbi)
2bj: SELENIUM ATOM (SEbj)
2bk: SELENIUM ATOM (SEbk)
2bl: SELENIUM ATOM (SEbl)
2bm: SELENIUM ATOM (SEbm)
2bn: SELENIUM ATOM (SEbn)
2bo: SELENIUM ATOM (SEbo)
2bp: SELENIUM ATOM (SEbp)
2bq: SELENIUM ATOM (SEbq)
2br: SELENIUM ATOM (SEbr)
2bs: SELENIUM ATOM (SEbs)
2bt: SELENIUM ATOM (SEbt)
2bu: SELENIUM ATOM (SEbu)
2bv: SELENIUM ATOM (SEbv)
2bw: SELENIUM ATOM (SEbw)
2bx: SELENIUM ATOM (SEbx)
2by: SELENIUM ATOM (SEby)
2bz: SELENIUM ATOM (SEbz)
2c: SELENIUM ATOM (SEc)
2ca: SELENIUM ATOM (SEca)
2cb: SELENIUM ATOM (SEcb)
2cc: SELENIUM ATOM (SEcc)
2cd: SELENIUM ATOM (SEcd)
2ce: SELENIUM ATOM (SEce)
2cf: SELENIUM ATOM (SEcf)
2cg: SELENIUM ATOM (SEcg)
2ch: SELENIUM ATOM (SEch)
2ci: SELENIUM ATOM (SEci)
2cj: SELENIUM ATOM (SEcj)
2ck: SELENIUM ATOM (SEck)
2cl: SELENIUM ATOM (SEcl)
2cm: SELENIUM ATOM (SEcm)
2cn: SELENIUM ATOM (SEcn)
2co: SELENIUM ATOM (SEco)
2cp: SELENIUM ATOM (SEcp)
2cq: SELENIUM ATOM (SEcq)
2cr: SELENIUM ATOM (SEcr)
2cs: SELENIUM ATOM (SEcs)
2ct: SELENIUM ATOM (SEct)
2d: SELENIUM ATOM (SEd)
2e: SELENIUM ATOM (SEe)
2f: SELENIUM ATOM (SEf)
2g: SELENIUM ATOM (SEg)
2h: SELENIUM ATOM (SEh)
2i: SELENIUM ATOM (SEi)
2j: SELENIUM ATOM (SEj)
2k: SELENIUM ATOM (SEk)
2l: SELENIUM ATOM (SEl)
2m: SELENIUM ATOM (SEm)
2n: SELENIUM ATOM (SEn)
2o: SELENIUM ATOM (SEo)
2p: SELENIUM ATOM (SEp)
2q: SELENIUM ATOM (SEq)
2r: SELENIUM ATOM (SEr)
2s: SELENIUM ATOM (SEs)
2t: SELENIUM ATOM (SEt)
2u: SELENIUM ATOM (SEu)
2v: SELENIUM ATOM (SEv)
2w: SELENIUM ATOM (SEw)
2x: SELENIUM ATOM (SEx)
2y: SELENIUM ATOM (SEy)
2z: SELENIUM ATOM (SEz)
3a: (UNKa)
3aa: (UNKaa)
3ab: (UNKab)
3ac: (UNKac)
3ad: (UNKad)
3ae: (UNKae)
3af: (UNKaf)
3ag: (UNKag)
3ah: (UNKah)
3ai: (UNKai)
3aj: (UNKaj)
3ak: (UNKak)
3al: (UNKal)
3am: (UNKam)
3an: (UNKan)
3ao: (UNKao)
3ap: (UNKap)
3aq: (UNKaq)
3ar: (UNKar)
3as: (UNKas)
3at: (UNKat)
3au: (UNKau)
3av: (UNKav)
3aw: (UNKaw)
3ax: (UNKax)
3ay: (UNKay)
3az: (UNKaz)
3b: (UNKb)
3ba: (UNKba)
3bb: (UNKbb)
3bc: (UNKbc)
3bd: (UNKbd)
3be: (UNKbe)
3bf: (UNKbf)
3bg: (UNKbg)
3bh: (UNKbh)
3bi: (UNKbi)
3bj: (UNKbj)
3bk: (UNKbk)
3bl: (UNKbl)
3bm: (UNKbm)
3bn: (UNKbn)
3bo: (UNKbo)
3bp: (UNKbp)
3bq: (UNKbq)
3br: (UNKbr)
3bs: (UNKbs)
3bt: (UNKbt)
3bu: (UNKbu)
3bv: (UNKbv)
3bw: (UNKbw)
3bx: (UNKbx)
3by: (UNKby)
3bz: (UNKbz)
3c: (UNKc)
3ca: (UNKca)
3cb: (UNKcb)
3cc: (UNKcc)
3cd: (UNKcd)
3ce: (UNKce)
3cf: (UNKcf)
3cg: (UNKcg)
3ch: (UNKch)
3ci: (UNKci)
3cj: (UNKcj)
3ck: (UNKck)
3cl: (UNKcl)
3cm: (UNKcm)
3cn: (UNKcn)
3co: (UNKco)
3cp: (UNKcp)
3cq: (UNKcq)
3cr: (UNKcr)
3cs: (UNKcs)
3ct: (UNKct)
3cu: (UNKcu)
3cv: (UNKcv)
3cw: (UNKcw)
3cx: (UNKcx)
3cy: (UNKcy)
3cz: (UNKcz)
3d: (UNKd)
3da: (UNKda)
3db: (UNKdb)
3dc: (UNKdc)
3dd: (UNKdd)
3de: (UNKde)
3df: (UNKdf)
3dg: (UNKdg)
3dh: (UNKdh)
3di: (UNKdi)
3dj: (UNKdj)
3dk: (UNKdk)
3dl: (UNKdl)
3dm: (UNKdm)
3dn: (UNKdn)
3do: (UNKdo)
3dp: (UNKdp)
3dq: (UNKdq)
3dr: (UNKdr)
3ds: (UNKds)
3dt: (UNKdt)
3du: (UNKdu)
3dv: (UNKdv)
3dw: (UNKdw)
3dx: (UNKdx)
3dy: (UNKdy)
3dz: (UNKdz)
3e: (UNKe)
3ea: (UNKea)
3eb: (UNKeb)
3ec: (UNKec)
3ed: (UNKed)
3ee: (UNKee)
3f: (UNKf)
3g: (UNKg)
3h: (UNKh)
3i: (UNKi)
3j: (UNKj)
3k: (UNKk)
3l: (UNKl)
3m: (UNKm)
3n: (UNKn)
3o: (UNKo)
3p: (UNKp)
3q: (UNKq)
3r: (UNKr)
3s: (UNKs)
3t: (UNKt)
3u: (UNKu)
3v: (UNKv)
3w: (UNKw)
3x: (UNKx)
3y: (UNKy)
3z: (UNKz)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
MSE
99
Mod. Amino Acid
SELENOMETHIONINE
2
SE
98
Ligand/Ion
SELENIUM ATOM
3
UNK
135
Mod. Amino Acid
[
close Hetero Component info
]
Sites
(59, 59)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
17: BC8 (SOFTWARE)
18: BC9 (SOFTWARE)
19: CC1 (SOFTWARE)
20: CC2 (SOFTWARE)
21: CC3 (SOFTWARE)
22: CC4 (SOFTWARE)
23: CC5 (SOFTWARE)
24: CC6 (SOFTWARE)
25: CC7 (SOFTWARE)
26: CC8 (SOFTWARE)
27: CC9 (SOFTWARE)
28: DC1 (SOFTWARE)
29: DC2 (SOFTWARE)
30: DC3 (SOFTWARE)
31: DC4 (SOFTWARE)
32: DC5 (SOFTWARE)
33: DC6 (SOFTWARE)
34: DC7 (SOFTWARE)
35: DC8 (SOFTWARE)
36: DC9 (SOFTWARE)
37: EC1 (SOFTWARE)
38: EC2 (SOFTWARE)
39: EC3 (SOFTWARE)
40: EC4 (SOFTWARE)
41: EC5 (SOFTWARE)
42: EC6 (SOFTWARE)
43: EC7 (SOFTWARE)
44: EC8 (SOFTWARE)
45: EC9 (SOFTWARE)
46: FC1 (SOFTWARE)
47: FC2 (SOFTWARE)
48: FC3 (SOFTWARE)
49: FC4 (SOFTWARE)
50: FC5 (SOFTWARE)
51: FC6 (SOFTWARE)
52: FC7 (SOFTWARE)
53: FC8 (SOFTWARE)
54: FC9 (SOFTWARE)
55: GC1 (SOFTWARE)
56: GC2 (SOFTWARE)
57: GC3 (SOFTWARE)
58: GC4 (SOFTWARE)
59: GC5 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
MSE A:114
BINDING SITE FOR RESIDUE SE A 133
02
AC2
SOFTWARE
MSE B:207 , THR G:184 , LEU G:188
BINDING SITE FOR RESIDUE SE B 1728
03
AC3
SOFTWARE
LEU B:229
BINDING SITE FOR RESIDUE SE B 1729
04
AC4
SOFTWARE
MSE B:238 , SER B:239 , SER B:242
BINDING SITE FOR RESIDUE SE B 1730
05
AC5
SOFTWARE
LEU B:510
BINDING SITE FOR RESIDUE SE B 1732
06
AC6
SOFTWARE
GLU B:440
BINDING SITE FOR RESIDUE SE B 903
07
AC7
SOFTWARE
SER B:480
BINDING SITE FOR RESIDUE SE B 904
08
AC8
SOFTWARE
ARG C:51
BINDING SITE FOR RESIDUE SE C 224
09
AC9
SOFTWARE
MSE C:38
BINDING SITE FOR RESIDUE SE C 225
10
BC1
SOFTWARE
MSE C:54
BINDING SITE FOR RESIDUE SE C 226
11
BC2
SOFTWARE
THR D:28 , MSE D:57
BINDING SITE FOR RESIDUE SE D 222
12
BC3
SOFTWARE
MSE D:56 , ASN D:60
BINDING SITE FOR RESIDUE SE D 223
13
BC4
SOFTWARE
MSE E:182
BINDING SITE FOR RESIDUE SE E 409
14
BC5
SOFTWARE
TRP E:41 , MSE E:204 , TYR E:209
BINDING SITE FOR RESIDUE SE E 410
15
BC6
SOFTWARE
SER E:27
BINDING SITE FOR RESIDUE SE E 411
16
BC7
SOFTWARE
MSE G:101
BINDING SITE FOR RESIDUE SE G 1299
17
BC8
SOFTWARE
LEU D:48 , MSE G:175
BINDING SITE FOR RESIDUE SE D 1301
18
BC9
SOFTWARE
GLU H:85 , LEU H:89
BINDING SITE FOR RESIDUE SE H 313
19
CC1
SOFTWARE
MSE I:238
BINDING SITE FOR RESIDUE SE I 1728
20
CC2
SOFTWARE
SER I:226
BINDING SITE FOR RESIDUE SE I 1729
21
CC3
SOFTWARE
SER I:480
BINDING SITE FOR RESIDUE SE I 903
22
CC4
SOFTWARE
PHE I:200
BINDING SITE FOR RESIDUE SE I 904
23
CC5
SOFTWARE
LEU I:479 , SER I:480
BINDING SITE FOR RESIDUE SE I 906
24
CC6
SOFTWARE
GLU J:53 , MSE J:54
BINDING SITE FOR RESIDUE SE J 225
25
CC7
SOFTWARE
SER K:54
BINDING SITE FOR RESIDUE SE K 173
26
CC8
SOFTWARE
THR K:62 , MSE K:63
BINDING SITE FOR RESIDUE SE K 174
27
CC9
SOFTWARE
LEU K:48 , MSE N:175
BINDING SITE FOR RESIDUE SE K 175
28
DC1
SOFTWARE
THR K:28 , THR K:29 , MSE K:57
BINDING SITE FOR RESIDUE SE K 177
29
DC2
SOFTWARE
SER L:73 , ILE L:76 , ASP L:77 , GLU L:78 , MSE L:80 , MSE L:81
BINDING SITE FOR RESIDUE SE L 408
30
DC3
SOFTWARE
ILE L:76 , MSE L:81
BINDING SITE FOR RESIDUE SE L 409
31
DC4
SOFTWARE
MSE L:182
BINDING SITE FOR RESIDUE SE L 410
32
DC5
SOFTWARE
SER L:27 , PHE L:222 , PHE L:223 , MSE L:224
BINDING SITE FOR RESIDUE SE L 412
33
DC6
SOFTWARE
MSE L:276 , LYS L:279
BINDING SITE FOR RESIDUE SE L 413
34
DC7
SOFTWARE
PRO L:291 , ASP L:292 , MSE L:296
BINDING SITE FOR RESIDUE SE L 414
35
DC8
SOFTWARE
MSE L:204 , TYR L:209
BINDING SITE FOR RESIDUE SE L 415
36
DC9
SOFTWARE
MSE I:207 , ILE I:211 , THR N:184
BINDING SITE FOR RESIDUE SE N 396
37
EC1
SOFTWARE
PHE N:52
BINDING SITE FOR RESIDUE SE N 397
38
EC2
SOFTWARE
MSE N:99
BINDING SITE FOR RESIDUE SE N 398
39
EC3
SOFTWARE
LEU N:107
BINDING SITE FOR RESIDUE SE N 400
40
EC4
SOFTWARE
MSE O:39 , LEU O:40
BINDING SITE FOR RESIDUE SE O 132
41
EC5
SOFTWARE
MSE O:114
BINDING SITE FOR RESIDUE SE O 133
42
EC6
SOFTWARE
ASN O:92
BINDING SITE FOR RESIDUE SE O 313
43
EC7
SOFTWARE
MSE P:207 , LEU P:208 , ILE P:211
BINDING SITE FOR RESIDUE SE P 1728
44
EC8
SOFTWARE
MSE P:238 , SE P:1731
BINDING SITE FOR RESIDUE SE P 1730
45
EC9
SOFTWARE
SER P:226 , LEU P:229 , SE P:1730
BINDING SITE FOR RESIDUE SE P 1731
46
FC1
SOFTWARE
MSE P:507
BINDING SITE FOR RESIDUE SE P 1733
47
FC2
SOFTWARE
SER P:480 , LEU P:481
BINDING SITE FOR RESIDUE SE P 902
48
FC3
SOFTWARE
GLU Q:53 , MSE Q:54
BINDING SITE FOR RESIDUE SE Q 325
49
FC4
SOFTWARE
MSE Q:126
BINDING SITE FOR RESIDUE SE Q 326
50
FC5
SOFTWARE
SER Q:78 , MSE R:56
BINDING SITE FOR RESIDUE SE Q 327
51
FC6
SOFTWARE
THR R:53
BINDING SITE FOR RESIDUE SE R 222
52
FC7
SOFTWARE
SER R:54
BINDING SITE FOR RESIDUE SE R 223
53
FC8
SOFTWARE
SER S:92
BINDING SITE FOR RESIDUE SE S 308
54
FC9
SOFTWARE
LEU S:5 , MSE S:182
BINDING SITE FOR RESIDUE SE S 309
55
GC1
SOFTWARE
TRP S:41 , ILE S:64 , MSE S:204 , TYR S:209
BINDING SITE FOR RESIDUE SE S 310
56
GC2
SOFTWARE
MSE T:57 , TYR T:58 , LEU T:71
BINDING SITE FOR RESIDUE SE T 311
57
GC3
SOFTWARE
TYR U:189
BINDING SITE FOR RESIDUE SE U 496
58
GC4
SOFTWARE
GLU U:104 , GLU U:105
BINDING SITE FOR RESIDUE SE U 499
59
GC5
SOFTWARE
SER U:172 , MSE U:175
BINDING SITE FOR RESIDUE SE U 500
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SAPs(SNPs)/Variants
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Exons
(4, 12)
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Exon 1.1 (C:29-210 (gaps) | J:29-210 (gaps) ...)
Exon 2.1 (E:2-300 (gaps) | L:2-300 (gaps) | ...)
Exon 3.1 (F:2-5 | M:2-5 | T:2-5)
Exon 3.2 (F:5-210 (gaps) | M:5-210 (gaps) | ...)
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1: Boundary -/1.1
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6: Boundary 3.1/3.2
7: Boundary 3.2/-
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1
YBR193C
1
YBR193C.1
II:609748-609077
672
MED8_YEAST
1-223
223
3
C:29-210 (gaps)
J:29-210 (gaps)
Q:29-210 (gaps)
182
182
182
2.1
YGR104C
1
YGR104C.1
VII:698372-697449
924
MED18_YEAST
1-307
307
3
E:2-300 (gaps)
L:2-300 (gaps)
S:2-300 (gaps)
299
299
299
3.1
YHR041C
1
YHR041C.1
VIII:189857-189844
14
MED20_YEAST
1-5
5
3
F:2-5
M:2-5
T:2-5
4
4
4
3.2
YHR041C
2
YHR041C.2
VIII:189742-189124
619
MED20_YEAST
5-210
206
3
F:5-210 (gaps)
M:5-210 (gaps)
T:5-210 (gaps)
206
206
206
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