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3RHF
Asym. Unit
Info
Asym.Unit (398 KB)
Biol.Unit 1 (194 KB)
Biol.Unit 2 (382 KB)
Biol.Unit 3 (193 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF POLYPHOSPHATE KINASE 2 FROM ARTHROBACTER AURESCENS TC1
Authors
:
B. Nocek, C. Hatzos-Skintges, B. Feldmann, G. Babnigg, A. Joachimiak, Center For Structural Genomics (Mcsg)
Date
:
11 Apr 11 (Deposition) - 01 Jun 11 (Release) - 01 Jun 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.45
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A,C (1x)
Biol. Unit 2: A,B,C,D (1x)
Biol. Unit 3: B,D (1x)
Keywords
:
Psi-Biology, Mcsg, Structural Genomics, Midwest Center For Structural Genomics, 3-Layer Alpha/Beta/Alpha Sandwich With The Central 5- Stranded, Transferase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
B. Nocek, C. Hatzos-Skintges, B. Feldmann, G. Babnigg, A. Joachimiak
Crystal Structure Of Polyphosphate Kinase 2 From Arthrobacter Aurescens Tc1
To Be Published
[
close entry info
]
Hetero Components
(7, 43)
Info
All Hetero Components
1a: CHLORIDE ION (CLa)
2a: 1,2-ETHANEDIOL (EDOa)
2b: 1,2-ETHANEDIOL (EDOb)
3a: CITRATE ANION (FLCa)
3b: CITRATE ANION (FLCb)
3c: CITRATE ANION (FLCc)
3d: CITRATE ANION (FLCd)
4a: SELENOMETHIONINE (MSEa)
4b: SELENOMETHIONINE (MSEb)
4c: SELENOMETHIONINE (MSEc)
4d: SELENOMETHIONINE (MSEd)
4e: SELENOMETHIONINE (MSEe)
4f: SELENOMETHIONINE (MSEf)
4g: SELENOMETHIONINE (MSEg)
4h: SELENOMETHIONINE (MSEh)
4i: SELENOMETHIONINE (MSEi)
4j: SELENOMETHIONINE (MSEj)
4k: SELENOMETHIONINE (MSEk)
4l: SELENOMETHIONINE (MSEl)
4m: SELENOMETHIONINE (MSEm)
4n: SELENOMETHIONINE (MSEn)
4o: SELENOMETHIONINE (MSEo)
4p: SELENOMETHIONINE (MSEp)
4q: SELENOMETHIONINE (MSEq)
4r: SELENOMETHIONINE (MSEr)
4s: SELENOMETHIONINE (MSEs)
4t: SELENOMETHIONINE (MSEt)
5a: TETRAETHYLENE GLYCOL (PG4a)
5b: TETRAETHYLENE GLYCOL (PG4b)
5c: TETRAETHYLENE GLYCOL (PG4c)
5d: TETRAETHYLENE GLYCOL (PG4d)
6a: TRIETHYLENE GLYCOL (PGEa)
6b: TRIETHYLENE GLYCOL (PGEb)
6c: TRIETHYLENE GLYCOL (PGEc)
6d: TRIETHYLENE GLYCOL (PGEd)
7a: PHOSPHATE ION (PO4a)
7b: PHOSPHATE ION (PO4b)
7c: PHOSPHATE ION (PO4c)
7d: PHOSPHATE ION (PO4d)
7e: PHOSPHATE ION (PO4e)
7f: PHOSPHATE ION (PO4f)
7g: PHOSPHATE ION (PO4g)
7h: PHOSPHATE ION (PO4h)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
CL
1
Ligand/Ion
CHLORIDE ION
2
EDO
2
Ligand/Ion
1,2-ETHANEDIOL
3
FLC
4
Ligand/Ion
CITRATE ANION
4
MSE
20
Mod. Amino Acid
SELENOMETHIONINE
5
PG4
4
Ligand/Ion
TETRAETHYLENE GLYCOL
6
PGE
4
Ligand/Ion
TRIETHYLENE GLYCOL
7
PO4
8
Ligand/Ion
PHOSPHATE ION
[
close Hetero Component info
]
Sites
(23, 23)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
17: BC8 (SOFTWARE)
18: BC9 (SOFTWARE)
19: CC1 (SOFTWARE)
20: CC2 (SOFTWARE)
21: CC3 (SOFTWARE)
22: CC4 (SOFTWARE)
23: CC5 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
PHE A:274 , GLU A:279 , ASP B:275 , TYR C:207 , SER C:208 , ARG C:209
BINDING SITE FOR RESIDUE PGE A 901
02
AC2
SOFTWARE
ALA A:14 , GLU A:235 , ILE A:236 , ALA A:261
BINDING SITE FOR RESIDUE PGE A 902
03
AC3
SOFTWARE
LYS A:40 , LYS A:44 , LYS A:247 , TRP A:248 , ARG A:251
BINDING SITE FOR RESIDUE FLC A 801
04
AC4
SOFTWARE
ARG A:197 , LYS A:203 , LYS A:206 , HOH A:364
BINDING SITE FOR RESIDUE PO4 A 287
05
AC5
SOFTWARE
MSE A:80 , ASP A:81 , THR A:82 , ALA A:83 , GLY A:84 , LYS A:85 , GLY A:86
BINDING SITE FOR RESIDUE PO4 A 288
06
AC6
SOFTWARE
TYR B:207 , ARG B:209 , GLU D:279
BINDING SITE FOR RESIDUE PG4 B 1001
07
AC7
SOFTWARE
MSE B:80 , ASP B:81 , THR B:82 , ALA B:83 , GLY B:84 , LYS B:85 , GLY B:86 , ASP B:136 , ARG B:197 , GLN D:99
BINDING SITE FOR RESIDUE FLC B 802
08
AC8
SOFTWARE
ALA B:14 , ASP B:260
BINDING SITE FOR RESIDUE PG4 B 287
09
AC9
SOFTWARE
ARG B:197 , LYS B:203 , LYS B:206 , HOH B:363
BINDING SITE FOR RESIDUE PO4 B 288
10
BC1
SOFTWARE
LYS B:40 , ASN B:245 , LYS B:246 , LYS B:247 , TRP B:248 , HOH B:389
BINDING SITE FOR RESIDUE PO4 B 289
11
BC2
SOFTWARE
HIS B:204
BINDING SITE FOR RESIDUE CL B 290
12
BC3
SOFTWARE
ILE C:178 , GLU C:235 , ILE C:236 , ALA C:261
BINDING SITE FOR RESIDUE PG4 C 1001
13
BC4
SOFTWARE
ALA C:79 , GLU C:141 , GLU C:214 , TYR C:225
BINDING SITE FOR RESIDUE EDO C 901
14
BC5
SOFTWARE
GLN A:99 , ASP C:81 , THR C:82 , LYS C:85 , GLY C:86 , LYS C:107 , ASP C:136 , ARG C:137 , ARG C:197 , HOH C:319 , HOH C:335 , HOH C:338
BINDING SITE FOR RESIDUE FLC C 801
15
BC6
SOFTWARE
ARG C:197 , LYS C:203 , LYS C:206 , HOH C:325 , HOH C:339 , HOH C:361
BINDING SITE FOR RESIDUE PO4 C 287
16
BC7
SOFTWARE
LYS C:40 , ASN C:245 , LYS C:246 , LYS C:247 , TRP C:248 , PO4 C:289
BINDING SITE FOR RESIDUE PO4 C 288
17
BC8
SOFTWARE
LYS C:40 , LYS C:44 , ARG C:251 , PO4 C:288
BINDING SITE FOR RESIDUE PO4 C 289
18
BC9
SOFTWARE
ASP A:275 , PHE B:274 , GLU B:279 , TYR D:207 , SER D:208 , ARG D:209 , HOH D:532
BINDING SITE FOR RESIDUE PG4 D 1002
19
CC1
SOFTWARE
ILE D:178 , ILE D:236 , PRO D:238 , ALA D:261
BINDING SITE FOR RESIDUE PGE D 901
20
CC2
SOFTWARE
GLN B:99 , ASP D:81 , THR D:82 , LYS D:85 , GLY D:86 , LYS D:107 , ASP D:136 , ARG D:137 , ARG D:197 , HOH D:289 , HOH D:346 , HOH D:354
BINDING SITE FOR RESIDUE FLC D 801
21
CC3
SOFTWARE
ALA D:79 , ASP D:81 , ARG D:137 , GLU D:141 , LEU D:144 , GLU D:214 , TYR D:225 , HOH D:359
BINDING SITE FOR RESIDUE EDO D 287
22
CC4
SOFTWARE
LYS D:40 , LYS D:44 , LYS D:247 , TRP D:248 , ARG D:251
BINDING SITE FOR RESIDUE PGE D 903
23
CC5
SOFTWARE
ARG D:197 , LYS D:203 , LYS D:206 , LYS D:247 , HOH D:331 , HOH D:351
BINDING SITE FOR RESIDUE PO4 D 288
[
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]
SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
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Sorry, no Info available
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PROSITE Patterns/Profiles
(0, 0)
Info
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;
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End label:
Sorry, no Info available
[
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Exons
(0, 0)
Info
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
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Sorry, no Info available
[
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CATH Domains
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Info
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Sorry, no Info available
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Pfam Domains
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Info
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Sorry, no Info available
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