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3RBX
Biol. Unit 2
Info
Asym.Unit (213 KB)
Biol.Unit 1 (72 KB)
Biol.Unit 2 (72 KB)
Biol.Unit 3 (72 KB)
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(1)
Title
:
MTHK RCK DOMAIN D184N MUTANT, CA2+-BOUND
Authors
:
E. Samakai, B. S. Rothberg
Date
:
30 Mar 11 (Deposition) - 12 Oct 11 (Release) - 12 Oct 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.80
Chains
:
Asym. Unit : A,B,C,D,E,F
Biol. Unit 1: A,B (1x)
Biol. Unit 2: C,D (1x)
Biol. Unit 3: E,F (1x)
Keywords
:
K+ Channel, Rck Domain, Rossman-Fold, Ca2+ Binding Domain, Transport Protein
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
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Reference
:
V. P. Pau, F. J. Smith, A. B. Taylor, E. Samakai, M. M. Callaghan, K. Abarca-Heidemann, L. V. Parfenova, P. J. Hart, B. S. Rothberg
Structures Of Multiple Ca2+-Binding Sites In A K+ Channel Rck Domain
Proc. Natl. Acad. Sci. Usa 2011
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Hetero Components
(0, 0)
Info
All Hetero Components
1a: CALCIUM ION (CAa)
1b: CALCIUM ION (CAb)
1c: CALCIUM ION (CAc)
1d: CALCIUM ION (CAd)
1e: CALCIUM ION (CAe)
1f: CALCIUM ION (CAf)
1g: CALCIUM ION (CAg)
1h: CALCIUM ION (CAh)
1i: CALCIUM ION (CAi)
1j: CALCIUM ION (CAj)
1k: CALCIUM ION (CAk)
1l: CALCIUM ION (CAl)
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Sites
(4, 4)
Info
All Sites
1: AC5 (SOFTWARE)
2: AC6 (SOFTWARE)
3: AC7 (SOFTWARE)
4: AC8 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC5
SOFTWARE
ARG C:241 , ASP C:245 , GLU C:248 , GLU D:266
BINDING SITE FOR RESIDUE CA C 600
2
AC6
SOFTWARE
ASP C:305 , GLY D:290 , GLU D:326
BINDING SITE FOR RESIDUE CA C 601
3
AC7
SOFTWARE
GLU C:266 , ARG D:241 , ASP D:245 , GLU D:248
BINDING SITE FOR RESIDUE CA C 341
4
AC8
SOFTWARE
GLY C:290 , GLU C:326 , ASP D:305
BINDING SITE FOR RESIDUE CA C 342
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are only available for the asymmetric unit)
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PROSITE Patterns/Profiles
(2, 4)
Info
All PROSITE Patterns/Profiles
1: RCK_N (C:117-237,D:117-237)
2: RCK_C (C:252-335,D:252-334)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
RCK_N
PS51201
RCK N-terminal domain profile.
MTHK_METTH
117-237
2
-
-
C:117-237
D:117-237
-
-
2
RCK_C
PS51202
RCK C-terminal domain profile.
MTHK_METTH
252-336
2
-
-
C:252-335
D:252-334
-
-
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Exons
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
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SCOP Domains
(2, 12)
Info
All SCOP Domains
1a: SCOP_d3rbxa2 (A:245-336)
1b: SCOP_d3rbxb2 (B:245-336)
1c: SCOP_d3rbxc2 (C:245-335)
1d: SCOP_d3rbxd2 (D:245-334)
1e: SCOP_d3rbxe2 (E:245-335)
1f: SCOP_d3rbxf2 (F:245-334)
2a: SCOP_d3rbxa1 (A:116-244)
2b: SCOP_d3rbxb1 (B:116-244)
2c: SCOP_d3rbxc1 (C:116-244)
2d: SCOP_d3rbxd1 (D:116-244)
2e: SCOP_d3rbxe1 (E:116-244)
2f: SCOP_d3rbxf1 (F:116-244)
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Classes
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)
Protein Domains
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(
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Organisms
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Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
TrkA C-terminal domain-like
(15)
Superfamily
:
TrkA C-terminal domain-like
(15)
Family
:
automated matches
(6)
Protein domain
:
automated matches
(6)
Methanothermobacter thermautotrophicus [TaxId: 187420]
(6)
1a
d3rbxa2
A:245-336
1b
d3rbxb2
B:245-336
1c
d3rbxc2
C:245-335
1d
d3rbxd2
D:245-334
1e
d3rbxe2
E:245-335
1f
d3rbxf2
F:245-334
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
NAD(P)-binding Rossmann-fold domains
(1604)
Superfamily
:
NAD(P)-binding Rossmann-fold domains
(1604)
Family
:
Potassium channel NAD-binding domain
(19)
Protein domain
:
automated matches
(6)
Methanothermobacter thermautotrophicus [TaxId: 187420]
(6)
2a
d3rbxa1
A:116-244
2b
d3rbxb1
B:116-244
2c
d3rbxc1
C:116-244
2d
d3rbxd1
D:116-244
2e
d3rbxe1
E:116-244
2f
d3rbxf1
F:116-244
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CATH Domains
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Pfam Domains
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Asymmetric Unit 1
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Show PDB file:
Asym.Unit (213 KB)
Header - Asym.Unit
Biol.Unit 1 (72 KB)
Header - Biol.Unit 1
Biol.Unit 2 (72 KB)
Header - Biol.Unit 2
Biol.Unit 3 (72 KB)
Header - Biol.Unit 3
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