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3R8R
Asym. Unit
Info
Asym.Unit (1.3 MB)
Biol.Unit 1 (793 KB)
Biol.Unit 2 (825 KB)
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(1)
Title
:
TRANSALDOLASE FROM BACILLUS SUBTILIS
Authors
:
G. Schneider, T. Sandalova, A. Samland
Date
:
24 Mar 11 (Deposition) - 08 Feb 12 (Release) - 21 Mar 12 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.90
Chains
:
Asym. Unit : A,B,C,D,E,F,G,H,I,J,K,L,M,N,P,R,T,U,V,W
Biol. Unit 1: A,B,C,D,E,F,G,H,I,J,L,V (1x)
Biol. Unit 2: G,J,K,L,M,N,P,R,T,U,V,W (1x)
Keywords
:
Transaldolase, Pentose Phosphate Pathway, Schiff Bases, Transferase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
A. K. Samland, S. Baier, M. Schurmann, T. Inoue, S. Huf, G. Schneider, G. A. Sprenger, T. Sandalova
Conservation Of Structure And Mechanism Within The Transaldolase Enzyme Family.
Febs J. V. 279 766 2012
[
close entry info
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Hetero Components
(2, 30)
Info
All Hetero Components
1a: GLYCEROL (GOLa)
1b: GLYCEROL (GOLb)
1c: GLYCEROL (GOLc)
1d: GLYCEROL (GOLd)
1e: GLYCEROL (GOLe)
1f: GLYCEROL (GOLf)
1g: GLYCEROL (GOLg)
1h: GLYCEROL (GOLh)
1i: GLYCEROL (GOLi)
1j: GLYCEROL (GOLj)
2a: SULFATE ION (SO4a)
2b: SULFATE ION (SO4b)
2c: SULFATE ION (SO4c)
2d: SULFATE ION (SO4d)
2e: SULFATE ION (SO4e)
2f: SULFATE ION (SO4f)
2g: SULFATE ION (SO4g)
2h: SULFATE ION (SO4h)
2i: SULFATE ION (SO4i)
2j: SULFATE ION (SO4j)
2k: SULFATE ION (SO4k)
2l: SULFATE ION (SO4l)
2m: SULFATE ION (SO4m)
2n: SULFATE ION (SO4n)
2o: SULFATE ION (SO4o)
2p: SULFATE ION (SO4p)
2q: SULFATE ION (SO4q)
2r: SULFATE ION (SO4r)
2s: SULFATE ION (SO4s)
2t: SULFATE ION (SO4t)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
GOL
10
Ligand/Ion
GLYCEROL
2
SO4
20
Ligand/Ion
SULFATE ION
[
close Hetero Component info
]
Sites
(30, 30)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
17: BC8 (SOFTWARE)
18: BC9 (SOFTWARE)
19: CC1 (SOFTWARE)
20: CC2 (SOFTWARE)
21: CC3 (SOFTWARE)
22: CC4 (SOFTWARE)
23: CC5 (SOFTWARE)
24: CC6 (SOFTWARE)
25: CC7 (SOFTWARE)
26: CC8 (SOFTWARE)
27: CC9 (SOFTWARE)
28: DC1 (SOFTWARE)
29: DC2 (SOFTWARE)
30: DC3 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
ASP A:6 , ASN A:28 , LYS A:84 , PHE A:130 , ALA A:164 , SER A:165 , SO4 A:301
BINDING SITE FOR RESIDUE GOL A 221
02
AC2
SOFTWARE
ARG A:133 , SER A:165 , ARG A:167 , GOL A:221 , HOH A:1036 , HOH A:2390 , HOH A:2431
BINDING SITE FOR RESIDUE SO4 A 301
03
AC3
SOFTWARE
ARG B:133 , SER B:165 , ARG B:167 , GOL B:221 , HOH B:349
BINDING SITE FOR RESIDUE SO4 B 301
04
AC4
SOFTWARE
ASP B:6 , ASN B:28 , LYS B:84 , PHE B:130 , ALA B:164 , SER B:165 , SO4 B:301
BINDING SITE FOR RESIDUE GOL B 221
05
AC5
SOFTWARE
ARG C:133 , SER C:165 , ARG C:167 , HOH C:3338
BINDING SITE FOR RESIDUE SO4 C 301
06
AC6
SOFTWARE
ARG D:133 , SER D:165 , ARG D:167
BINDING SITE FOR RESIDUE SO4 D 301
07
AC7
SOFTWARE
ARG E:133 , SER E:165 , ARG E:167 , GOL E:221 , HOH E:935
BINDING SITE FOR RESIDUE SO4 E 301
08
AC8
SOFTWARE
ARG F:133 , SER F:165 , ARG F:167 , GOL F:221 , HOH F:1992
BINDING SITE FOR RESIDUE SO4 F 301
09
AC9
SOFTWARE
ASP E:6 , ASN E:28 , LYS E:84 , PHE E:130 , ALA E:164 , SER E:165 , SO4 E:301
BINDING SITE FOR RESIDUE GOL E 221
10
BC1
SOFTWARE
ARG G:133 , SER G:165 , ARG G:167 , HOH G:2688
BINDING SITE FOR RESIDUE SO4 G 301
11
BC2
SOFTWARE
ARG H:133 , SER H:165 , ARG H:167 , HOH H:2522
BINDING SITE FOR RESIDUE SO4 H 301
12
BC3
SOFTWARE
ASP F:6 , ASN F:28 , LYS F:84 , PHE F:130 , SER F:165 , SO4 F:301
BINDING SITE FOR RESIDUE GOL F 221
13
BC4
SOFTWARE
ARG I:133 , SER I:165 , ARG I:167
BINDING SITE FOR RESIDUE SO4 I 301
14
BC5
SOFTWARE
ARG J:133 , SER J:165 , ARG J:167
BINDING SITE FOR RESIDUE SO4 J 301
15
BC6
SOFTWARE
ASP G:6 , ASN G:28 , LYS G:84 , PHE G:130 , ALA G:164 , SER G:165 , HOH G:214
BINDING SITE FOR RESIDUE GOL G 221
16
BC7
SOFTWARE
ARG V:133 , SER V:165 , ARG V:167 , GOL V:221 , HOH V:683 , HOH V:1877 , HOH V:3214
BINDING SITE FOR RESIDUE SO4 V 301
17
BC8
SOFTWARE
ARG K:133 , SER K:165 , ARG K:167 , HOH K:1965
BINDING SITE FOR RESIDUE SO4 K 301
18
BC9
SOFTWARE
ARG L:133 , SER L:165 , ARG L:167 , GOL L:221
BINDING SITE FOR RESIDUE SO4 L 301
19
CC1
SOFTWARE
ARG M:133 , SER M:165 , ARG M:167
BINDING SITE FOR RESIDUE SO4 M 301
20
CC2
SOFTWARE
ARG N:133 , SER N:165 , ARG N:167 , HOH N:2996 , HOH N:3317
BINDING SITE FOR RESIDUE SO4 N 301
21
CC3
SOFTWARE
ASP V:6 , ASN V:28 , LYS V:84 , PHE V:130 , ALA V:164 , SER V:165 , SO4 V:301
BINDING SITE FOR RESIDUE GOL V 221
22
CC4
SOFTWARE
ARG W:133 , SER W:165 , ARG W:167 , GOL W:221
BINDING SITE FOR RESIDUE SO4 W 301
23
CC5
SOFTWARE
ARG P:133 , SER P:165 , ARG P:167 , HOH P:1731 , HOH P:2853 , HOH P:3292
BINDING SITE FOR RESIDUE SO4 P 301
24
CC6
SOFTWARE
ARG R:133 , SER R:165 , ARG R:167 , GOL R:221
BINDING SITE FOR RESIDUE SO4 R 301
25
CC7
SOFTWARE
ASP L:6 , ASN L:28 , LYS L:84 , PHE L:130 , ALA L:164 , SER L:165 , SO4 L:301
BINDING SITE FOR RESIDUE GOL L 221
26
CC8
SOFTWARE
ARG T:133 , SER T:165 , ARG T:167 , HOH T:2343 , HOH T:3088
BINDING SITE FOR RESIDUE SO4 T 301
27
CC9
SOFTWARE
ARG U:133 , SER U:165 , ARG U:167 , GOL U:221 , HOH U:1629
BINDING SITE FOR RESIDUE SO4 U 301
28
DC1
SOFTWARE
ASP W:6 , ASN W:28 , LYS W:84 , PHE W:130 , ARG W:133 , ALA W:164 , SER W:165 , SO4 W:301
BINDING SITE FOR RESIDUE GOL W 221
29
DC2
SOFTWARE
ASP R:6 , ASN R:28 , LYS R:84 , PHE R:130 , ALA R:164 , SER R:165 , SO4 R:301
BINDING SITE FOR RESIDUE GOL R 221
30
DC3
SOFTWARE
ASP U:6 , ASN U:28 , LYS U:84 , PHE U:130 , ALA U:164 , SER U:165 , SO4 U:301
BINDING SITE FOR RESIDUE GOL U 221
[
close Site info
]
SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
View:
Select:
Label:
Sorry, no Info available
[
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PROSITE Patterns/Profiles
(2, 40)
Info
All PROSITE Patterns/Profiles
1: TRANSALDOLASE_1 (A:24-32,B:24-32,C:24-31,D:24-32,E:...)
2: TRANSALDOLASE_2 (A:81-98,B:81-98,C:81-98,D:81-98,E:...)
;
View:
Select:
Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
TRANSALDOLASE_1
PS01054
Transaldolase signature 1.
TAL_BACSU
24-32
20
A:24-32
B:24-32
C:24-31
D:24-32
E:24-32
F:24-32
G:24-32
H:24-32
I:24-32
J:24-32
K:24-32
L:24-32
M:24-32
N:24-29
P:24-28
R:24-32
T:24-32
U:24-32
V:24-32
W:24-32
2
TRANSALDOLASE_2
PS00958
Transaldolase active site.
TAL_BACSU
81-98
20
A:81-98
B:81-98
C:81-98
D:81-98
E:81-98
F:81-98
G:81-98
H:81-98
I:81-98
J:81-98
K:81-98
L:81-98
M:81-98
N:81-98
P:81-98
R:81-98
T:81-98
U:81-98
V:81-98
W:81-98
[
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]
Exons
(0, 0)
Info
All Exons
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All Exon Boundaries
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 20)
Info
All SCOP Domains
1a: SCOP_d3r8ra_ (A:)
1b: SCOP_d3r8rb_ (B:)
1c: SCOP_d3r8rk_ (K:)
1d: SCOP_d3r8rl_ (L:)
1e: SCOP_d3r8rm_ (M:)
1f: SCOP_d3r8rn_ (N:)
1g: SCOP_d3r8rp_ (P:)
1h: SCOP_d3r8rr_ (R:)
1i: SCOP_d3r8rt_ (T:)
1j: SCOP_d3r8ru_ (U:)
1k: SCOP_d3r8rv_ (V:)
1l: SCOP_d3r8rw_ (W:)
1m: SCOP_d3r8rc_ (C:)
1n: SCOP_d3r8rd_ (D:)
1o: SCOP_d3r8re_ (E:)
1p: SCOP_d3r8rf_ (F:)
1q: SCOP_d3r8rg_ (G:)
1r: SCOP_d3r8rh_ (H:)
1s: SCOP_d3r8ri_ (I:)
1t: SCOP_d3r8rj_ (J:)
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)
(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
TIM beta/alpha-barrel
(3956)
Superfamily
:
Aldolase
(457)
Family
:
automated matches
(113)
Protein domain
:
automated matches
(113)
Bacillus subtilis [TaxId: 1423]
(1)
1a
d3r8ra_
A:
1b
d3r8rb_
B:
1c
d3r8rk_
K:
1d
d3r8rl_
L:
1e
d3r8rm_
M:
1f
d3r8rn_
N:
1g
d3r8rp_
P:
1h
d3r8rr_
R:
1i
d3r8rt_
T:
1j
d3r8ru_
U:
1k
d3r8rv_
V:
1l
d3r8rw_
W:
1m
d3r8rc_
C:
1n
d3r8rd_
D:
1o
d3r8re_
E:
1p
d3r8rf_
F:
1q
d3r8rg_
G:
1r
d3r8rh_
H:
1s
d3r8ri_
I:
1t
d3r8rj_
J:
[
close SCOP info
]
CATH Domains
(0, 0)
Info
all CATH domains
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Sorry, no Info available
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Pfam Domains
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Asym.Unit (1.3 MB)
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