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3R7S
Asym. Unit
Info
Asym.Unit (90 KB)
Biol.Unit 1 (43 KB)
Biol.Unit 2 (44 KB)
Biol.Unit 3 (84 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF APO CASPASE2
Authors
:
Y. Tang, J. Wells, M. Arkin
Date
:
22 Mar 11 (Deposition) - 27 Jul 11 (Release) - 19 Oct 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.25
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A,B (1x)
Biol. Unit 2: C,D (1x)
Biol. Unit 3: A,B,C,D (1x)
Keywords
:
Hydrolase, Apoptosis
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
Y. Tang, J. A. Wells, M. R. Arkin
Structural And Enzymatic Insights Into Caspase-2 Protein Substrate Recognition And Catalysis.
J. Biol. Chem. V. 286 34147 2011
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Hetero Components
(0, 0)
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Sorry, no Info available
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Sites
(0, 0)
Info
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Sorry, no Info available
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SAPs(SNPs)/Variants
(2, 4)
Info
(mutated residues are not available)
All SNPs/Variants
1: VAR_016335 (P178A, chain A/C, )
2: VAR_016336 (R441G, chain B/D, )
View:
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Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_016335
P
178
A
CASP2_HUMAN
Polymorphism
4647298
A/C
P
178
A
2
UniProt
VAR_016336
R
441
G
CASP2_HUMAN
Polymorphism
4647338
B/D
R
441
G
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(4, 7)
Info
All PROSITE Patterns/Profiles
1: CASPASE_P20 (A:198-324,C:198-324)
2: CASPASE_HIS (A:264-278,C:264-278)
3: CASPASE_CYS (A:311-322,C:311-322)
4: CASPASE_P10 (B:354-447)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
CASPASE_P20
PS50208
Caspase family p20 domain profile.
CASP2_HUMAN
198-324
2
A:198-324
C:198-324
2
CASPASE_HIS
PS01121
Caspase family histidine active site.
CASP2_HUMAN
264-278
2
A:264-278
C:264-278
3
CASPASE_CYS
PS01122
Caspase family cysteine active site.
CASP2_HUMAN
311-322
2
A:311-322
C:311-322
4
CASPASE_P10
PS50207
Caspase family p10 domain profile.
CASP2_HUMAN
354-447
1
B:354-447
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Exons
(7, 16)
Info
All Exons
Exon 1.7a (A:174-190 | - | C:174-190 | -)
Exon 1.8a (A:191-249 | - | C:191-249 | -)
Exon 1.9 (A:250-292 | - | C:250-292 | -)
Exon 1.10a (A:293-323 | - | C:293-323 | -)
Exon 1.10e (A:323-332 | B:354-373 | C:323-332 ...)
Exon 1.11 (- | B:373-409 | - | D:373-409)
Exon 1.12d (- | B:410-451 | - | D:410-451)
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All Exon Boundaries
1: Boundary 1.5/1.7a
2: Boundary 1.7a/1.8a
3: Boundary 1.8a/1.9
4: Boundary 1.9/1.10a
5: Boundary 1.10a/1.10e
6: Boundary 1.10e/1.11
7: Boundary 1.11/1.12d
8: Boundary 1.12d/-
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1a
ENST00000310447
1a
ENSE00001809494
chr7:
142985308-142985622
315
CASP2_HUMAN
1-25
25
0
-
-
1.3a
ENST00000310447
3a
ENSE00001734851
chr7:
142988633-142988783
151
CASP2_HUMAN
25-75
51
0
-
-
1.4b
ENST00000310447
4b
ENSE00001363075
chr7:
142989393-142989560
168
CASP2_HUMAN
76-131
56
0
-
-
1.5
ENST00000310447
5
ENSE00000872252
chr7:
142989710-142989791
82
CASP2_HUMAN
132-159
28
0
-
-
1.7a
ENST00000310447
7a
ENSE00000728843
chr7:
142991323-142991417
95
CASP2_HUMAN
159-190
32
2
A:174-190
-
C:174-190
-
17
-
17
-
1.8a
ENST00000310447
8a
ENSE00001717071
chr7:
142991690-142991866
177
CASP2_HUMAN
191-249
59
2
A:191-249
-
C:191-249
-
59
-
59
-
1.9
ENST00000310447
9
ENSE00001734267
chr7:
142997016-142997144
129
CASP2_HUMAN
250-292
43
2
A:250-292
-
C:250-292
-
43
-
43
-
1.10a
ENST00000310447
10a
ENSE00001720132
chr7:
142997297-142997387
91
CASP2_HUMAN
293-323
31
2
A:293-323
-
C:293-323
-
31
-
31
-
1.10e
ENST00000310447
10e
ENSE00001802806
chr7:
143000877-143001026
150
CASP2_HUMAN
323-373
51
4
A:323-332
B:354-373
C:323-332
D:357-373
10
20
10
17
1.11
ENST00000310447
11
ENSE00001667926
chr7:
143001767-143001876
110
CASP2_HUMAN
373-409
37
2
-
B:373-409
-
D:373-409
-
37
-
37
1.12d
ENST00000310447
12d
ENSE00001823824
chr7:
143002033-143004789
2757
CASP2_HUMAN
410-452
43
2
-
B:410-451
-
D:410-451
-
42
-
42
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Asym.Unit (90 KB)
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