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3R7L
Biol. Unit 1
Info
Asym.Unit (300 KB)
Biol.Unit 1 (149 KB)
Biol.Unit 2 (150 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF PALA-BOUND ASPARTATE TRANSCARBAMOYLASE FROM BACILLUS SUBTILIS
Authors
:
K. M. Harris, G. M. Cockrell, D. E. Puleo, E. R. Kantrowitz
Date
:
22 Mar 11 (Deposition) - 08 Jun 11 (Release) - 10 Aug 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.58
Chains
:
Asym. Unit : A,B,C,D,E,F
Biol. Unit 1: A,B,C (1x)
Biol. Unit 2: D,E,F (1x)
Keywords
:
Aspartate Transcarbamoylase, Pala, Transferase, Catalytic Cycle
(Keyword Search:
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Reference
:
K. M. Harris, G. M. Cockrell, D. E. Puleo, E. R. Kantrowitz
Crystallographic Snapshots Of The Complete Catalytic Cycle Of The Unregulated Aspartate Transcarbamoylase From Bacillu Subtilis.
J. Mol. Biol. V. 411 190 2011
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Hetero Components
(2, 4)
Info
All Hetero Components
1a: N-(PHOSPHONACETYL)-L-ASPARTIC ACID (PALa)
1b: N-(PHOSPHONACETYL)-L-ASPARTIC ACID (PALb)
1c: N-(PHOSPHONACETYL)-L-ASPARTIC ACID (PALc)
1d: N-(PHOSPHONACETYL)-L-ASPARTIC ACID (PALd)
1e: N-(PHOSPHONACETYL)-L-ASPARTIC ACID (PALe)
1f: N-(PHOSPHONACETYL)-L-ASPARTIC ACID (PALf)
2a: PHOSPHATE ION (PO4a)
2b: PHOSPHATE ION (PO4b)
View:
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Label:
No.
Name
Count
Type
Full Name
1
PAL
3
Ligand/Ion
N-(PHOSPHONACETYL)-L-ASPARTIC ACID
2
PO4
1
Ligand/Ion
PHOSPHATE ION
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Sites
(4, 4)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
SER A:47 , THR A:48 , ARG A:49 , THR A:50 , ARG A:99 , HIS A:127 , ARG A:160 , ARG A:211 , GLN A:213 , ALA A:250 , HOH A:331 , HOH A:341 , HOH A:343 , SER B:74 , LYS B:77
BINDING SITE FOR RESIDUE PAL A 311
2
AC2
SOFTWARE
SER B:47 , THR B:48 , ARG B:49 , THR B:50 , ARG B:99 , HIS B:127 , ARG B:160 , ARG B:211 , GLN B:213 , ALA B:250 , HOH B:310 , HOH B:326 , HOH B:341 , SER C:74 , LYS C:77
BINDING SITE FOR RESIDUE PAL B 312
3
AC3
SOFTWARE
LYS A:59 , LYS B:59 , HOH B:305 , LYS C:59 , HOH C:311 , HOH C:332 , HOH C:425
BINDING SITE FOR RESIDUE PO4 C 305
4
AC4
SOFTWARE
SER A:74 , LYS A:77 , SER C:47 , THR C:48 , ARG C:49 , THR C:50 , ARG C:99 , HIS C:127 , ARG C:160 , ARG C:211 , GLN C:213 , ALA C:250 , HOH C:309 , HOH C:323 , HOH C:342
BINDING SITE FOR RESIDUE PAL C 313
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are only available for the asymmetric unit)
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PROSITE Patterns/Profiles
(1, 3)
Info
All PROSITE Patterns/Profiles
1: CARBAMOYLTRANSFERASE (A:43-50,B:43-50,C:43-50)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
CARBAMOYLTRANSFERASE
PS00097
Aspartate and ornithine carbamoyltransferases signature.
PYRB_BACSU
43-50
3
A:43-50
B:43-50
C:43-50
-
-
-
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Exons
(0, 0)
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(1, 12)
Info
All SCOP Domains
1a: SCOP_d3r7la1 (A:1-143)
1b: SCOP_d3r7la2 (A:144-290)
1c: SCOP_d3r7lb1 (B:1-143)
1d: SCOP_d3r7lb2 (B:144-290)
1e: SCOP_d3r7lc1 (C:1-143)
1f: SCOP_d3r7lc2 (C:144-290)
1g: SCOP_d3r7ld1 (D:1-143)
1h: SCOP_d3r7ld2 (D:144-290)
1i: SCOP_d3r7le1 (E:1-143)
1j: SCOP_d3r7le2 (E:144-290)
1k: SCOP_d3r7lf1 (F:1-143)
1l: SCOP_d3r7lf2 (F:144-290)
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Protein Domains
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Organisms
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(
)
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
ATC-like
(129)
Superfamily
:
Aspartate/ornithine carbamoyltransferase
(122)
Family
:
automated matches
(35)
Protein domain
:
automated matches
(35)
Bacillus subtilis [TaxId: 1423]
(3)
1a
d3r7la1
A:1-143
1b
d3r7la2
A:144-290
1c
d3r7lb1
B:1-143
1d
d3r7lb2
B:144-290
1e
d3r7lc1
C:1-143
1f
d3r7lc2
C:144-290
1g
d3r7ld1
D:1-143
1h
d3r7ld2
D:144-290
1i
d3r7le1
E:1-143
1j
d3r7le2
E:144-290
1k
d3r7lf1
F:1-143
1l
d3r7lf2
F:144-290
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CATH Domains
(0, 0)
Info
all CATH domains
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Sorry, no Info available
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Pfam Domains
(2, 12)
Info
all PFAM domains
1a: PFAM_OTCace_3r7lF01 (F:146-288)
1b: PFAM_OTCace_3r7lF02 (F:146-288)
1c: PFAM_OTCace_3r7lF03 (F:146-288)
1d: PFAM_OTCace_3r7lF04 (F:146-288)
1e: PFAM_OTCace_3r7lF05 (F:146-288)
1f: PFAM_OTCace_3r7lF06 (F:146-288)
2a: PFAM_OTCace_N_3r7lF07 (F:2-141)
2b: PFAM_OTCace_N_3r7lF08 (F:2-141)
2c: PFAM_OTCace_N_3r7lF09 (F:2-141)
2d: PFAM_OTCace_N_3r7lF10 (F:2-141)
2e: PFAM_OTCace_N_3r7lF11 (F:2-141)
2f: PFAM_OTCace_N_3r7lF12 (F:2-141)
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)
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)
Clan
:
no clan defined [family: OTCace]
(48)
Family
:
OTCace
(48)
Bacillus subtilis
(3)
1a
OTCace-3r7lF01
F:146-288
1b
OTCace-3r7lF02
F:146-288
1c
OTCace-3r7lF03
F:146-288
1d
OTCace-3r7lF04
F:146-288
1e
OTCace-3r7lF05
F:146-288
1f
OTCace-3r7lF06
F:146-288
Clan
:
no clan defined [family: OTCace_N]
(48)
Family
:
OTCace_N
(48)
Bacillus subtilis
(3)
2a
OTCace_N-3r7lF07
F:2-141
2b
OTCace_N-3r7lF08
F:2-141
2c
OTCace_N-3r7lF09
F:2-141
2d
OTCace_N-3r7lF10
F:2-141
2e
OTCace_N-3r7lF11
F:2-141
2f
OTCace_N-3r7lF12
F:2-141
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