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3R4S
Asym. Unit
Info
Asym.Unit (165 KB)
Biol.Unit 1 (82 KB)
Biol.Unit 2 (82 KB)
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(1)
Title
:
CELL ENTRY OF BOTULINUM NEUROTOXIN TYPE C IS DEPENDENT UPON INTERACTION WITH TWO GANGLIOSIDE MOLECULES
Authors
:
J. Strotmeier, S. Gu, S. Jutzi, S. Mahrhold, J. Zhou, A. Pich, H. Bigalke A. Rummel, R. Jin, T. Binz
Date
:
17 Mar 11 (Deposition) - 08 Jun 11 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.15
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Keywords
:
Botulinum Toxins, Gangliosides, Hydrolase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
J. Strotmeier, S. Gu, S. Jutzi, S. Mahrhold, J. Zhou, A. Pich, T. Eichner, H. Bigalke, A. Rummel, R. Jin, T. Binz
The Biological Activity Of Botulinum Neurotoxin Type C Is Dependent Upon Novel Types Of Ganglioside Binding Sites.
Mol. Microbiol. V. 81 143 2011
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Hetero Components
(2, 4)
Info
All Hetero Components
1a: O-SIALIC ACID (SIAa)
1b: O-SIALIC ACID (SIAb)
2a: 5-N-ACETYL-BETA-D-NEURAMINIC ACID (SLBa)
2b: 5-N-ACETYL-BETA-D-NEURAMINIC ACID (SLBb)
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No.
Name
Count
Type
Full Name
1
SIA
2
Ligand/Ion
O-SIALIC ACID
2
SLB
2
Ligand/Ion
5-N-ACETYL-BETA-D-NEURAMINIC ACID
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Sites
(4, 4)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
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Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
HOH B:309 , HOH B:504 , HOH B:722 , HOH B:775 , TYR B:1125 , ALA B:1126 , ASN B:1127 , SER B:1128 , ARG B:1129 , TYR B:1146
BINDING SITE FOR RESIDUE SLB B 6875
2
AC2
SOFTWARE
HOH A:181 , HOH A:662 , HOH A:730 , TYR A:1125 , ALA A:1126 , ASN A:1127 , SER A:1128 , ARG A:1129 , TYR A:1146 , TYR A:1179
BINDING SITE FOR RESIDUE SLB A 6875
3
AC3
SOFTWARE
HOH B:163 , HOH B:370 , HOH B:484 , TYR B:1169 , ASP B:1171 , ASN B:1180 , GLN B:1206 , THR B:1207 , LYS B:1208 , ILE B:1210
BINDING SITE FOR RESIDUE SIA B 6859
4
AC4
SOFTWARE
HOH A:206 , HOH A:305 , HOH A:339 , HOH A:576 , TYR A:1169 , ASP A:1171 , ASN A:1180 , GLN A:1206 , THR A:1207 , LYS A:1208
BINDING SITE FOR RESIDUE SIA A 6859
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are not available)
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PROSITE Patterns/Profiles
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Exons
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(2, 4)
Info
All SCOP Domains
1a: SCOP_d3r4sa2 (A:1094-1291)
1b: SCOP_d3r4sb2 (B:1094-1291)
2a: SCOP_d3r4sa1 (A:864-1093)
2b: SCOP_d3r4sb1 (B:864-1093)
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Class
:
All beta proteins
(24004)
Fold
:
beta-Trefoil
(385)
Superfamily
:
STI-like
(91)
Family
:
automated matches
(27)
Protein domain
:
automated matches
(27)
Clostridium botulinum [TaxId: 1491]
(19)
1a
d3r4sa2
A:1094-1291
1b
d3r4sb2
B:1094-1291
Fold
:
Concanavalin A-like lectins/glucanases
(797)
Superfamily
:
Concanavalin A-like lectins/glucanases
(797)
Family
:
automated matches
(133)
Protein domain
:
automated matches
(133)
Clostridium botulinum [TaxId: 1491]
(19)
2a
d3r4sa1
A:864-1093
2b
d3r4sb1
B:864-1093
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CATH Domains
(0, 0)
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all CATH domains
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Pfam Domains
(2, 4)
Info
all PFAM domains
1a: PFAM_Toxin_R_bind_N_3r4sB01 (B:880-1080)
1b: PFAM_Toxin_R_bind_N_3r4sB02 (B:880-1080)
2a: PFAM_Toxin_R_bind_C_3r4sB03 (B:1089-1291)
2b: PFAM_Toxin_R_bind_C_3r4sB04 (B:1089-1291)
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Clan
:
Concanavalin
(293)
Family
:
Toxin_R_bind_N
(27)
Clostridium botulinum
(26)
1a
Toxin_R_bind_N-3r4sB01
B:880-1080
1b
Toxin_R_bind_N-3r4sB02
B:880-1080
Clan
:
Trefoil
(131)
Family
:
Toxin_R_bind_C
(27)
Clostridium botulinum
(26)
2a
Toxin_R_bind_C-3r4sB03
B:1089-1291
2b
Toxin_R_bind_C-3r4sB04
B:1089-1291
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Asymmetric Unit 1
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Asym.Unit (165 KB)
Header - Asym.Unit
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Header - Biol.Unit 1
Biol.Unit 2 (82 KB)
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