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3R2P
Asym. Unit
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Asym.Unit (69 KB)
Biol.Unit 1 (127 KB)
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(1)
Title
:
2.2 ANGSTROM CRYSTAL STRUCTURE OF C TERMINAL TRUNCATED HUMAN APOLIPOPROTEIN A-I REVEALS THE ASSEMBLY OF HDL BY DIMERIZATION.
Authors
:
X. Mei, D. Atkinson
Date
:
14 Mar 11 (Deposition) - 21 Sep 11 (Release) - 16 Nov 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.20
Chains
:
Asym. Unit : A
Biol. Unit 1: A (2x)
Keywords
:
Amphipathic Alpha-Helix, Major Protein Of High Density Lipoprotein (Hdl), Lipid Binding, Plasma, Lipid Transport
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
X. Mei, D. Atkinson
Crystal Structure Of C-Terminal Truncated Apolipoprotein A- Reveals The Assembly Of High Density Lipoprotein (Hdl) By Dimerization.
J. Biol. Chem. V. 286 38570 2011
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Hetero Components
(0, 0)
Info
All Hetero Components
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Sites
(0, 0)
Info
All Sites
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Label:
Sorry, no Info available
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SAPs(SNPs)/Variants
(24, 24)
Info
(mutated residues are not available)
All SNPs/Variants
01: VAR_000605 (P3H, chain A, )
02: VAR_000606 (P3R, chain A, )
03: VAR_000607 (P4R, chain A, )
04: VAR_000608 (R10L, chain A, )
05: VAR_000609 (G26R, chain A, )
06: VAR_025445 (A37T, chain A, )
07: VAR_000610 (L60R, chain A, )
08: VAR_017017 (T68I, chain A, )
09: VAR_000611 (D89E, chain A, )
10: VAR_000612 (A95D, chain A, )
11: VAR_016189 (D102H, chain A, )
12: VAR_000613 (D103N, chain A, )
13: VAR_000615 (K107M, chain A, )
14: VAR_000616 (W108R, chain A, )
15: VAR_000617 (E110K, chain A, )
16: VAR_000618 (E136K, chain A, )
17: VAR_000619 (E139G, chain A, )
18: VAR_000620 (P143R, chain A, )
19: VAR_000621 (L144R, chain A, )
20: VAR_000622 (E147V, chain A, )
21: VAR_021362 (V156E, chain A, )
22: VAR_014609 (R160P, chain A, )
23: VAR_000623 (P165R, chain A, )
24: VAR_000624 (R173C, chain A, )
View:
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Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
01
UniProt
VAR_000605
P
27
H
APOA1_HUMAN
Polymorphism
121912720
A
P
3
H
02
UniProt
VAR_000606
P
27
R
APOA1_HUMAN
Polymorphism
121912720
A
P
3
R
03
UniProt
VAR_000607
P
28
R
APOA1_HUMAN
Unclassified
---
A
P
4
R
04
UniProt
VAR_000608
R
34
L
APOA1_HUMAN
Polymorphism
28929476
A
R
10
L
05
UniProt
VAR_000609
G
50
R
APOA1_HUMAN
Disease (AMYL8)
28931574
A
G
26
R
06
UniProt
VAR_025445
A
61
T
APOA1_HUMAN
Polymorphism
12718465
A
A
37
T
07
UniProt
VAR_000610
L
84
R
APOA1_HUMAN
Disease (AMYL8)
---
A
L
60
R
08
UniProt
VAR_017017
T
92
I
APOA1_HUMAN
Polymorphism
---
A
T
68
I
09
UniProt
VAR_000611
D
113
E
APOA1_HUMAN
Polymorphism
---
A
D
89
E
10
UniProt
VAR_000612
A
119
D
APOA1_HUMAN
Unclassified
---
A
A
95
D
11
UniProt
VAR_016189
D
126
H
APOA1_HUMAN
Polymorphism
5077
A
D
102
H
12
UniProt
VAR_000613
D
127
N
APOA1_HUMAN
Unclassified
---
A
D
103
N
13
UniProt
VAR_000615
K
131
M
APOA1_HUMAN
Polymorphism
4882
A
K
107
M
14
UniProt
VAR_000616
W
132
R
APOA1_HUMAN
Unclassified
---
A
W
108
R
15
UniProt
VAR_000617
E
134
K
APOA1_HUMAN
Unclassified
---
A
E
110
K
16
UniProt
VAR_000618
E
160
K
APOA1_HUMAN
Unclassified
---
A
E
136
K
17
UniProt
VAR_000619
E
163
G
APOA1_HUMAN
Polymorphism
---
A
E
139
G
18
UniProt
VAR_000620
P
167
R
APOA1_HUMAN
Unclassified
---
A
P
143
R
19
UniProt
VAR_000621
L
168
R
APOA1_HUMAN
Unclassified
---
A
L
144
R
20
UniProt
VAR_000622
E
171
V
APOA1_HUMAN
Polymorphism
---
A
E
147
V
21
UniProt
VAR_021362
V
180
E
APOA1_HUMAN
Unclassified
---
A
V
156
E
22
UniProt
VAR_014609
R
184
P
APOA1_HUMAN
Polymorphism
5078
A
R
160
P
23
UniProt
VAR_000623
P
189
R
APOA1_HUMAN
Polymorphism
---
A
P
165
R
24
UniProt
VAR_000624
R
197
C
APOA1_HUMAN
Polymorphism
28931573
A
R
173
C
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
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Exons
(2, 2)
Info
All Exons
Exon 1.2 (A:3-43)
Exon 1.3 (A:43-182)
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All Exon Boundaries
1: Boundary 1.1b/1.2
2: Boundary 1.2/1.3
3: Boundary 1.3/-
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1b
ENST00000375323
1b
ENSE00001466703
chr11:
116708330-116708061
270
APOA1_HUMAN
1-15
15
0
-
-
1.2
ENST00000375323
2
ENSE00000795784
chr11:
116707873-116707717
157
APOA1_HUMAN
15-67
53
1
A:3-43
41
1.3
ENST00000375323
3
ENSE00001411471
chr11:
116707127-116706467
661
APOA1_HUMAN
67-267
201
1
A:43-182
140
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Chain A
Asymmetric Unit 1
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Asym.Unit (69 KB)
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