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3R2B
Biol. Unit 12
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Asym.Unit (1.1 MB)
Biol.Unit 1 (99 KB)
Biol.Unit 10 (99 KB)
Biol.Unit 11 (99 KB)
Biol.Unit 12 (99 KB)
Biol.Unit 2 (98 KB)
Biol.Unit 3 (99 KB)
Biol.Unit 4 (98 KB)
Biol.Unit 5 (99 KB)
Biol.Unit 6 (98 KB)
Biol.Unit 7 (99 KB)
Biol.Unit 8 (99 KB)
Biol.Unit 9 (98 KB)
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(1)
Title
:
MK2 KINASE BOUND TO COMPOUND 5B
Authors
:
A. Oubrie, M. Van Zeeland, J. Versteegh
Date
:
14 Mar 11 (Deposition) - 25 May 11 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.90
Chains
:
Asym. Unit : A,B,C,D,E,F,G,H,I,J,K,L
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Biol. Unit 3: C (1x)
Biol. Unit 4: D (1x)
Biol. Unit 5: E (1x)
Biol. Unit 6: F (1x)
Biol. Unit 7: G (1x)
Biol. Unit 8: H (1x)
Biol. Unit 9: I (1x)
Biol. Unit 10: J (1x)
Biol. Unit 11: K (1x)
Biol. Unit 12: L (1x)
Keywords
:
Kinase Domain With Bound Inhibitor, Kinase Domain, Phosphotransferase, Transferase-Transferase Inhibitor Complex
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
T. Barf, A. Kaptein, S. Wilde, R. Heijden, R. Someren, D. Demont, C. Schultz-Fademrecht, J. Versteegh, M. Zeeland, N. Seegers, B. Kazemier, B. Kar, M. Hoek, J. Roos, H. Klop, R. Smeets, C. Hofstra, J. Hornberg, A. Oubrie
Structure-Based Lead Identification Of Atp-Competitive Mk2 Inhibitors.
Bioorg. Med. Chem. Lett. V. 21 3818 2011
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Hetero Components
(0, 0)
Info
All Hetero Components
1a: 2'-[2-(1,3-BENZODIOXOL-5-YL)PYRIMI... (05Ba)
1b: 2'-[2-(1,3-BENZODIOXOL-5-YL)PYRIMI... (05Bb)
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Sites
(0, 0)
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SAPs(SNPs)/Variants
(1, 1)
Info
(mutated residues are only available for the asymmetric unit)
All SNPs/Variants
1: VAR_040753 (A173G, chain L, )
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dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_040753
A
173
G
MAPK2_HUMAN
Polymorphism
35671930
L
A
173
G
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(2, 2)
Info
All PROSITE Patterns/Profiles
1: PROTEIN_KINASE_ATP (L:70-93)
2: PROTEIN_KINASE_ST (L:182-194)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
PROTEIN_KINASE_ATP
PS00107
Protein kinases ATP-binding region signature.
MAPK2_HUMAN
70-93
1
-
-
-
-
-
-
-
-
-
-
-
L:70-93
2
PROTEIN_KINASE_ST
PS00108
Serine/Threonine protein kinases active-site signature.
MAPK2_HUMAN
182-194
1
-
-
-
-
-
-
-
-
-
-
-
L:182-194
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Exons
(0, 0)
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
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SCOP Domains
(1, 12)
Info
All SCOP Domains
1a: SCOP_d3r2ba_ (A:)
1b: SCOP_d3r2bb_ (B:)
1c: SCOP_d3r2bc_ (C:)
1d: SCOP_d3r2bd_ (D:)
1e: SCOP_d3r2be_ (E:)
1f: SCOP_d3r2bf_ (F:)
1g: SCOP_d3r2bg_ (G:)
1h: SCOP_d3r2bh_ (H:)
1i: SCOP_d3r2bi_ (I:)
1j: SCOP_d3r2bj_ (J:)
1k: SCOP_d3r2bk_ (K:)
1l: SCOP_d3r2bl_ (L:)
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Organisms
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(
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Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
Protein kinase-like (PK-like)
(2589)
Superfamily
:
Protein kinase-like (PK-like)
(2589)
Family
:
Protein kinases, catalytic subunit
(1977)
Protein domain
:
MAP kinase activated protein kinase 2, mapkap2
(14)
Human (Homo sapiens) [TaxId: 9606]
(14)
1a
d3r2ba_
A:
1b
d3r2bb_
B:
1c
d3r2bc_
C:
1d
d3r2bd_
D:
1e
d3r2be_
E:
1f
d3r2bf_
F:
1g
d3r2bg_
G:
1h
d3r2bh_
H:
1i
d3r2bi_
I:
1j
d3r2bj_
J:
1k
d3r2bk_
K:
1l
d3r2bl_
L:
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CATH Domains
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Pfam Domains
(1, 12)
Info
all PFAM domains
1a: PFAM_Pkinase_3r2bL01 (L:64-325)
1b: PFAM_Pkinase_3r2bL02 (L:64-325)
1c: PFAM_Pkinase_3r2bL03 (L:64-325)
1d: PFAM_Pkinase_3r2bL04 (L:64-325)
1e: PFAM_Pkinase_3r2bL05 (L:64-325)
1f: PFAM_Pkinase_3r2bL06 (L:64-325)
1g: PFAM_Pkinase_3r2bL07 (L:64-325)
1h: PFAM_Pkinase_3r2bL08 (L:64-325)
1i: PFAM_Pkinase_3r2bL09 (L:64-325)
1j: PFAM_Pkinase_3r2bL10 (L:64-325)
1k: PFAM_Pkinase_3r2bL11 (L:64-325)
1l: PFAM_Pkinase_3r2bL12 (L:64-325)
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Clan
:
PKinase
(934)
Family
:
Pkinase
(680)
Homo sapiens (Human)
(521)
1a
Pkinase-3r2bL01
L:64-325
1b
Pkinase-3r2bL02
L:64-325
1c
Pkinase-3r2bL03
L:64-325
1d
Pkinase-3r2bL04
L:64-325
1e
Pkinase-3r2bL05
L:64-325
1f
Pkinase-3r2bL06
L:64-325
1g
Pkinase-3r2bL07
L:64-325
1h
Pkinase-3r2bL08
L:64-325
1i
Pkinase-3r2bL09
L:64-325
1j
Pkinase-3r2bL10
L:64-325
1k
Pkinase-3r2bL11
L:64-325
1l
Pkinase-3r2bL12
L:64-325
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Chain L
Asymmetric Unit 1
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Asym.Unit (1.1 MB)
Header - Asym.Unit
Biol.Unit 1 (99 KB)
Header - Biol.Unit 1
Biol.Unit 10 (99 KB)
Header - Biol.Unit 10
Biol.Unit 11 (99 KB)
Header - Biol.Unit 11
Biol.Unit 12 (99 KB)
Header - Biol.Unit 12
Biol.Unit 2 (98 KB)
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Biol.Unit 3 (99 KB)
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Biol.Unit 4 (98 KB)
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Biol.Unit 5 (99 KB)
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Biol.Unit 6 (98 KB)
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Biol.Unit 7 (99 KB)
Header - Biol.Unit 7
Biol.Unit 8 (99 KB)
Header - Biol.Unit 8
Biol.Unit 9 (98 KB)
Header - Biol.Unit 9
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