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Asym. Unit
Info
Asym.Unit (345 KB)
Biol.Unit 1 (171 KB)
Biol.Unit 2 (171 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF A 17BETA-HYDROXYSTEROID DEHYDROGENASE (HOLO FORM) FROM FUNGUS COCHLIOBOLUS LUNATUS IN COMPLEX WITH NADPH AND COUMESTROL
Authors
:
A. Cassetta, D. Lamba, I. Krastanova, J. Stojan, T. Lanisnik Rizner, K M. Brunskole
Date
:
28 Feb 11 (Deposition) - 18 Jan 12 (Release) - 03 Jul 13 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.50
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A,B (1x)
Biol. Unit 2: C,D (1x)
Keywords
:
17Beta-Hydroxysteroid Dehydrogenase, Short Chain Dehydrogenase/Reductase, Phytoestrogens, Flavonoid, Rossmann Fold, Cytosol, Oxidoreductase-Oxidoreductase Inhibitor Complex
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
A. Cassetta, I. Krastanova, K. Kristan, M. Brunskole Svegelj, D. Lamba, T. Lanisnik Rizner, J. Stojan
Structural Studies On The Flavonoid Inhibition Of A Fungal 17Beta-Hydroxysteroid Dehydrogenase
Biochem. J. V. 441 151 2012
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Hetero Components
(3, 16)
Info
All Hetero Components
1a: COUMESTROL (CUEa)
1b: COUMESTROL (CUEb)
1c: COUMESTROL (CUEc)
2a: 1,2-ETHANEDIOL (EDOa)
2b: 1,2-ETHANEDIOL (EDOb)
2c: 1,2-ETHANEDIOL (EDOc)
2d: 1,2-ETHANEDIOL (EDOd)
2e: 1,2-ETHANEDIOL (EDOe)
2f: 1,2-ETHANEDIOL (EDOf)
2g: 1,2-ETHANEDIOL (EDOg)
2h: 1,2-ETHANEDIOL (EDOh)
2i: 1,2-ETHANEDIOL (EDOi)
3a: NADP NICOTINAMIDE-ADENINE-DINUCLEO... (NAPa)
3b: NADP NICOTINAMIDE-ADENINE-DINUCLEO... (NAPb)
3c: NADP NICOTINAMIDE-ADENINE-DINUCLEO... (NAPc)
3d: NADP NICOTINAMIDE-ADENINE-DINUCLEO... (NAPd)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
CUE
3
Ligand/Ion
COUMESTROL
2
EDO
9
Ligand/Ion
1,2-ETHANEDIOL
3
NAP
4
Ligand/Ion
NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
[
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Sites
(16, 16)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
GLY A:25 , ARG A:28 , GLY A:29 , ILE A:30 , ALA A:50 , ASN A:51 , SER A:52 , ALA A:75 , ASP A:76 , ILE A:77 , ARG A:78 , ASN A:103 , SER A:104 , GLY A:105 , LEU A:126 , THR A:151 , SER A:152 , SER A:153 , TYR A:167 , LYS A:171 , PRO A:197 , GLY A:198 , GLY A:199 , THR A:200 , THR A:202 , MET A:204 , CUE A:272 , HOH A:313 , HOH A:327 , HOH A:366
BINDING SITE FOR RESIDUE NAP A 271
02
AC2
SOFTWARE
ASN A:154 , PHE A:159 , GLY A:199 , MET A:204 , TYR A:212 , ILE A:213 , MET A:227 , ALA A:228 , NAP A:271
BINDING SITE FOR RESIDUE CUE A 272
03
AC3
SOFTWARE
ASP A:242 , ASN A:245
BINDING SITE FOR RESIDUE EDO A 273
04
AC4
SOFTWARE
ALA A:92
BINDING SITE FOR RESIDUE EDO A 274
05
AC5
SOFTWARE
SER A:160 , TYR A:212 , EDO A:276
BINDING SITE FOR RESIDUE EDO A 275
06
AC6
SOFTWARE
PRO A:162 , HIS A:211 , EDO A:275
BINDING SITE FOR RESIDUE EDO A 276
07
AC7
SOFTWARE
GLY B:25 , ARG B:28 , GLY B:29 , ILE B:30 , TYR B:49 , ALA B:50 , ASN B:51 , SER B:52 , ALA B:75 , ASP B:76 , ILE B:77 , ARG B:78 , ASN B:103 , SER B:104 , GLY B:105 , LEU B:126 , THR B:151 , SER B:152 , TYR B:167 , LYS B:171 , PRO B:197 , GLY B:198 , GLY B:199 , THR B:200 , THR B:202 , MET B:204 , CUE B:272 , HOH B:287 , HOH B:289 , HOH B:294 , HOH B:318 , HOH B:320 , HOH B:329
BINDING SITE FOR RESIDUE NAP B 271
08
AC8
SOFTWARE
ASN B:154 , PHE B:159 , GLY B:199 , MET B:204 , PHE B:205 , TYR B:212 , ILE B:213 , MET B:227 , ALA B:228 , NAP B:271 , HOH B:306
BINDING SITE FOR RESIDUE CUE B 272
09
AC9
SOFTWARE
GLY C:25 , ARG C:28 , GLY C:29 , ILE C:30 , ALA C:50 , ASN C:51 , SER C:52 , ALA C:75 , ASP C:76 , ILE C:77 , ARG C:78 , ASN C:103 , SER C:104 , GLY C:105 , LEU C:126 , THR C:151 , SER C:152 , SER C:153 , TYR C:167 , LYS C:171 , PRO C:197 , GLY C:198 , GLY C:199 , THR C:200 , THR C:202 , MET C:204 , HOH C:276 , HOH C:280 , HOH C:288 , HOH C:300 , HOH C:323
BINDING SITE FOR RESIDUE NAP C 271
10
BC1
SOFTWARE
LYS C:19 , GLY C:145 , ARG C:147 , VAL C:251 , LYS C:253
BINDING SITE FOR RESIDUE EDO C 272
11
BC2
SOFTWARE
SER C:160
BINDING SITE FOR RESIDUE EDO C 273
12
BC3
SOFTWARE
GLY D:25 , ARG D:28 , GLY D:29 , ILE D:30 , ALA D:50 , ASN D:51 , SER D:52 , ASP D:76 , ILE D:77 , ARG D:78 , ASN D:103 , SER D:104 , GLY D:105 , LEU D:126 , THR D:151 , SER D:152 , TYR D:167 , LYS D:171 , PRO D:197 , GLY D:198 , GLY D:199 , THR D:200 , THR D:202 , MET D:204 , CUE D:272 , HOH D:290 , HOH D:302 , HOH D:320 , HOH D:386 , HOH D:420
BINDING SITE FOR RESIDUE NAP D 271
13
BC4
SOFTWARE
ASN D:154 , PHE D:159 , GLY D:199 , PHE D:205 , TYR D:212 , MET D:227 , ALA D:228 , NAP D:271 , HOH D:416
BINDING SITE FOR RESIDUE CUE D 272
14
BC5
SOFTWARE
ARG D:236 , ASP D:242
BINDING SITE FOR RESIDUE EDO D 273
15
BC6
SOFTWARE
LYS D:74 , GLU D:82 , LYS D:85 , GLN D:89
BINDING SITE FOR RESIDUE EDO D 274
16
BC7
SOFTWARE
ARG D:122
BINDING SITE FOR RESIDUE EDO D 275
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
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Exons
(0, 0)
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All Exons
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 4)
Info
All SCOP Domains
1a: SCOP_d3qwia_ (A:)
1b: SCOP_d3qwib_ (B:)
1c: SCOP_d3qwic_ (C:)
1d: SCOP_d3qwid_ (D:)
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Protein Domains
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Organisms
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(
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Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
NAD(P)-binding Rossmann-fold domains
(1604)
Superfamily
:
NAD(P)-binding Rossmann-fold domains
(1604)
Family
:
automated matches
(447)
Protein domain
:
automated matches
(447)
Cochliobolus lunatus [TaxId: 5503]
(9)
1a
d3qwia_
A:
1b
d3qwib_
B:
1c
d3qwic_
C:
1d
d3qwid_
D:
[
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CATH Domains
(0, 0)
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all CATH domains
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Sorry, no Info available
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Pfam Domains
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Asymmetric Unit 1
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select all 'ALA' residues (Alanines) in chain 'A'
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select residue range 5 to 10 in all chains
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select residue range 5 to 10 in chain 'A'
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Asym.Unit (345 KB)
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Biol.Unit 1 (171 KB)
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