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3QVI
Asym. Unit
Info
Asym.Unit (466 KB)
Biol.Unit 1 (453 KB)
Biol.Unit 2 (229 KB)
Biol.Unit 3 (231 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF KNI-10395 BOUND HISTO-ASPARTIC PROTEASE (HAP) FROM PLASMODIUM FALCIPARUM
Authors
:
P. Bhaumik, A. Gustchina, A. Wlodawer
Date
:
25 Feb 11 (Deposition) - 12 Oct 11 (Release) - 30 Nov 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.50
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A,B,C,D (1x)
Biol. Unit 2: A,B (1x)
Biol. Unit 3: C,D (1x)
Keywords
:
Histo-Aspartic Protease, Hap, Plasmepsin, Aspartic Protease, Malaria, Kni, Kni-10395, Hydrolase-Hydrolase Inhibitor Complex
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
P. Bhaumik, H. Xiao, K. Hidaka, A. Gustchina, Y. Kiso, R. Y. Yada, A. Wlodawer
Structural Insights Into The Activation And Inhibition Of Histo-Aspartic Protease From Plasmodium Falciparum.
Biochemistry V. 50 8862 2011
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Hetero Components
(6, 22)
Info
All Hetero Components
1a: ACETATE ION (ACTa)
2a: 1,2-ETHANEDIOL (EDOa)
2b: 1,2-ETHANEDIOL (EDOb)
2c: 1,2-ETHANEDIOL (EDOc)
2d: 1,2-ETHANEDIOL (EDOd)
2e: 1,2-ETHANEDIOL (EDOe)
2f: 1,2-ETHANEDIOL (EDOf)
2g: 1,2-ETHANEDIOL (EDOg)
2h: 1,2-ETHANEDIOL (EDOh)
2i: 1,2-ETHANEDIOL (EDOi)
2j: 1,2-ETHANEDIOL (EDOj)
2k: 1,2-ETHANEDIOL (EDOk)
2l: 1,2-ETHANEDIOL (EDOl)
3a: (4R)-N-[(1S,2R)-2-HYDROXY-2,3-DIHY... (K95a)
3b: (4R)-N-[(1S,2R)-2-HYDROXY-2,3-DIHY... (K95b)
3c: (4R)-N-[(1S,2R)-2-HYDROXY-2,3-DIHY... (K95c)
4a: SODIUM ION (NAa)
5a: TETRAETHYLENE GLYCOL (PG4a)
5b: TETRAETHYLENE GLYCOL (PG4b)
5c: TETRAETHYLENE GLYCOL (PG4c)
5d: TETRAETHYLENE GLYCOL (PG4d)
6a: 1-METHOXY-2-[2-(2-METHOXY-ETHOXY]-... (PG5a)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
ACT
1
Ligand/Ion
ACETATE ION
2
EDO
12
Ligand/Ion
1,2-ETHANEDIOL
3
K95
3
Ligand/Ion
(4R)-N-[(1S,2R)-2-HYDROXY-2,3-DIHYDRO-1H-INDEN-1-YL]-3-[(2S,3S)-2-HYDROXY-3-{[S-METHYL-N-(PHENYLACETYL)-L-CYSTEINYL]AMINO}-4-PHENYLBUTANOYL]-5,5-DIMETHYL-1,3-THIAZOLIDINE-4-CARBOXAMIDE
4
NA
1
Ligand/Ion
SODIUM ION
5
PG4
4
Ligand/Ion
TETRAETHYLENE GLYCOL
6
PG5
1
Ligand/Ion
1-METHOXY-2-[2-(2-METHOXY-ETHOXY]-ETHANE
[
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Sites
(21, 21)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
17: BC8 (SOFTWARE)
18: BC9 (SOFTWARE)
19: CC1 (SOFTWARE)
20: CC2 (SOFTWARE)
21: CC3 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
HIS A:32 , ALA A:34 , SER A:35 , LEU A:128 , LEU A:291 , HOH A:350 , HOH A:607 , GLU B:278A , HOH B:364
BINDING SITE FOR RESIDUE K95 A 329
02
AC2
SOFTWARE
HIS C:32 , ALA C:34 , SER C:35 , LEU C:128 , ASP C:215 , GLU C:292 , HOH C:365 , GLU D:278A , ALA D:280 , HOH D:666 , HOH D:710
BINDING SITE FOR RESIDUE K95 C 329
03
AC3
SOFTWARE
GLU C:278A , LEU C:281 , HOH C:338 , HOH C:556 , HOH C:592 , HIS D:32 , ALA D:34 , SER D:35 , MET D:189 , ASP D:215 , EDO D:332
BINDING SITE FOR RESIDUE K95 C 330
04
AC4
SOFTWARE
ARG B:261 , ARG D:261
BINDING SITE FOR RESIDUE NA D 329
05
AC5
SOFTWARE
SER C:36 , GLY C:122 , LEU C:123 , GLY C:124 , PRO C:135 , TYR C:136 , HOH C:398 , HOH C:828
BINDING SITE FOR RESIDUE EDO C 331
06
AC6
SOFTWARE
PHE A:111 , HOH A:383 , PRO B:277 , GLU B:278A , ASN B:279 , ILE B:279A , SER B:279C , HOH B:581
BINDING SITE FOR RESIDUE EDO B 329
07
AC7
SOFTWARE
PHE C:111 , PRO D:277 , GLU D:278A , ASN D:279 , ILE D:279A , SER D:279C , HOH D:557 , HOH D:600 , HOH D:762
BINDING SITE FOR RESIDUE EDO D 330
08
AC8
SOFTWARE
LYS A:66 , LYS A:100 , GLN A:230
BINDING SITE FOR RESIDUE EDO A 330
09
AC9
SOFTWARE
GLN C:143 , LYS C:145 , LYS D:19
BINDING SITE FOR RESIDUE EDO C 332
10
BC1
SOFTWARE
PRO C:98 , LYS C:145 , ASP D:22 , HOH D:362
BINDING SITE FOR RESIDUE EDO C 333
11
BC2
SOFTWARE
LYS D:100 , GLU D:226 , ASN D:229 , GLU D:233
BINDING SITE FOR RESIDUE EDO D 331
12
BC3
SOFTWARE
K95 C:330 , SER D:35 , SER D:36 , ASN D:37 , TRP D:39 , LEU D:128
BINDING SITE FOR RESIDUE EDO D 332
13
BC4
SOFTWARE
THR C:63 , GLU C:65 , LYS C:86 , PRO C:98 , ASN D:23 , HOH D:817
BINDING SITE FOR RESIDUE EDO D 333
14
BC5
SOFTWARE
SER A:219 , GLU A:276 , ASN A:285 , GLU B:276 , PG5 B:330
BINDING SITE FOR RESIDUE EDO A 331
15
BC6
SOFTWARE
ASP C:67 , THR C:69 , LYS C:100 , GLY C:131
BINDING SITE FOR RESIDUE EDO C 334
16
BC7
SOFTWARE
GLU A:276 , MET A:283 , ASN A:285 , EDO A:331 , VAL B:220 , GLU B:276 , MET B:283
BINDING SITE FOR RESIDUE PG5 B 330
17
BC8
SOFTWARE
ARG B:261 , ASP D:193 , ASP D:195 , LYS D:209 , ARG D:261 , SER D:262 , PRO D:263
BINDING SITE FOR RESIDUE PG4 D 334
18
BC9
SOFTWARE
PRO A:70 , VAL A:71 , LYS A:72 , SER A:236
BINDING SITE FOR RESIDUE PG4 A 333
19
CC1
SOFTWARE
SER A:95 , PRO A:98 , LYS A:145
BINDING SITE FOR RESIDUE PG4 A 334
20
CC2
SOFTWARE
LYS A:183 , ASN B:203 , PHE B:238
BINDING SITE FOR RESIDUE PG4 A 335
21
CC3
SOFTWARE
ASN A:144 , LYS A:145 , ILE A:146 , GLU A:147
BINDING SITE FOR RESIDUE ACT A 336
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
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Exons
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
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CATH Domains
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Pfam Domains
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Asymmetric Unit 1
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select chains 'A' and 'C'
select [ALA]:A
select all 'ALA' residues (Alanines) in chain 'A'
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select residue range 5 to 10 in all chains
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select residue range 5 to 10 in chain 'A'
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Asym.Unit (466 KB)
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Biol.Unit 1 (453 KB)
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