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3QUG
Biol. Unit 1
Info
Asym.Unit (51 KB)
Biol.Unit 1 (24 KB)
Biol.Unit 2 (24 KB)
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(1)
Title
:
STRUCTURE OF HEME TRANSPORT PROTEIN ISDH-NEAT3 FROM S. AUREUS IN COMPLEX WITH GALLIUM-PORPHYRIN
Authors
:
Y. Moriwaki, J. M. M. Caaveiro, K. Tsumoto
Date
:
24 Feb 11 (Deposition) - 30 Mar 11 (Release) - 15 Feb 12 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.70
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Keywords
:
Gallium, Metalloporphyrin, Metal Selectivity, Neat Domain, Heme Binding, Heme Transport, Heme, Hemin, Ppix, Protoporphyrin Ix, Cell Wall, Heme-Binding Protein
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
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)
Reference
:
Y. Moriwaki, J. M. M. Caaveiro, Y. Tanaka, H. Tsutsumi, I. Hamachi, K. Tsumoto
Molecular Basis Of Recognition Of Antibacterial Porphyrins By Heme-Transporter Isdh-Neat3 Of Staphylococcus Aureus.
Biochemistry V. 50 7311 2011
(for further references see the
PDB file header
)
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Hetero Components
(3, 3)
Info
All Hetero Components
1a: PROTOPORPHYRIN IX CONTAINING GA (GIXa)
1b: PROTOPORPHYRIN IX CONTAINING GA (GIXb)
2a: GLYCEROL (GOLa)
2b: GLYCEROL (GOLb)
3a: SULFATE ION (SO4a)
3b: SULFATE ION (SO4b)
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No.
Name
Count
Type
Full Name
1
GIX
1
Ligand/Ion
PROTOPORPHYRIN IX CONTAINING GA
2
GOL
1
Ligand/Ion
GLYCEROL
3
SO4
1
Ligand/Ion
SULFATE ION
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Sites
(4, 4)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
HOH A:4 , HOH A:79 , GLU A:556 , SER A:563 , VAL A:564 , PHE A:568 , GLY A:580 , TRP A:594 , VAL A:635 , ILE A:640 , TYR A:642 , TYR A:646 , VAL A:648 , VAL B:564 , GIX B:700
BINDING SITE FOR RESIDUE GIX A 700
2
AC2
SOFTWARE
HOH A:40 , HOH A:120 , GLU A:570 , HIS A:571 , LYS A:589 , HOH B:11 , LYS B:612
BINDING SITE FOR RESIDUE SO4 A 1
3
AC3
SOFTWARE
ASP A:591 , TRP A:594 , LYS A:595 , ASP A:596 , VAL A:604 , ARG A:616 , LEU A:618
BINDING SITE FOR RESIDUE GOL A 11
4
AC4
SOFTWARE
VAL A:564 , GIX A:700 , HOH B:8 , HOH B:84 , HOH B:136 , GLU B:556 , SER B:563 , VAL B:564 , PHE B:568 , GLY B:580 , TYR B:593 , TRP B:594 , VAL B:635 , ILE B:640 , TYR B:642 , TYR B:646 , VAL B:648
BINDING SITE FOR RESIDUE GIX B 700
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are only available for the asymmetric unit)
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PROSITE Patterns/Profiles
(1, 1)
Info
All PROSITE Patterns/Profiles
1: NEAT (A:543-655)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
NEAT
PS50978
NEAT domain profile.
ISDH_STAAM
105-232
345-471
543-660
1
-
-
A:543-655
-
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Exons
(0, 0)
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
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SCOP Domains
(1, 2)
Info
All SCOP Domains
1a: SCOP_d3quga_ (A:)
1b: SCOP_d3qugb_ (B:)
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(
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Class
:
All beta proteins
(24004)
Fold
:
Immunoglobulin-like beta-sandwich
(7299)
Superfamily
:
NEAT domain-like
(27)
Family
:
automated matches
(13)
Protein domain
:
automated matches
(13)
Staphylococcus aureus [TaxId: 158878]
(1)
1a
d3quga_
A:
1b
d3qugb_
B:
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CATH Domains
(0, 0)
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all CATH domains
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Pfam Domains
(1, 2)
Info
all PFAM domains
1a: PFAM_NEAT_3qugB01 (B:543-655)
1b: PFAM_NEAT_3qugB02 (B:543-655)
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Clan
:
no clan defined [family: NEAT]
(8)
Family
:
NEAT
(8)
Staphylococcus aureus (strain Mu50 / ATCC 700699)
(4)
1a
NEAT-3qugB01
B:543-655
1b
NEAT-3qugB02
B:543-655
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Asym.Unit (51 KB)
Header - Asym.Unit
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