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3QQ7
Asym. Unit
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Asym.Unit (63 KB)
Biol.Unit 1 (59 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF THE P97 N-TERMINAL DOMAIN
Authors
:
P. Haenzelmann, H. Schindelin
Date
:
15 Feb 11 (Deposition) - 22 Jun 11 (Release) - 22 Jun 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.65
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
Beta-Barrel, Atpase, Ubiquitin, Phosphorylation, Transport Protein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
P. Hanzelmann, A. Buchberger, H. Schindelin
Hierarchical Binding Of Cofactors To The Aaa Atpase P97.
Structure V. 19 833 2011
[
close entry info
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Hetero Components
(4, 4)
Info
All Hetero Components
1a: CHLORIDE ION (CLa)
2a: COBALT (II) ION (COa)
3a: GLYCEROL (GOLa)
4a: HEXANE-1,6-DIOL (HEZa)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
CL
1
Ligand/Ion
CHLORIDE ION
2
CO
1
Ligand/Ion
COBALT (II) ION
3
GOL
1
Ligand/Ion
GLYCEROL
4
HEZ
1
Ligand/Ion
HEXANE-1,6-DIOL
[
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Sites
(4, 4)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
ASP A:35 , ASN A:36 , TYR A:138 , LEU A:153 , VAL A:154 , ARG A:155 , HOH A:195
BINDING SITE FOR RESIDUE HEZ A 400
2
AC2
SOFTWARE
ASP A:107 , VAL A:108 , LYS A:109 , PRO A:170 , TYR A:173
BINDING SITE FOR RESIDUE GOL A 401
3
AC3
SOFTWARE
ARG A:113 , HIS A:183 , CL A:403
BINDING SITE FOR RESIDUE CO A 402
4
AC4
SOFTWARE
ARG A:113 , HIS A:115 , CO A:402
BINDING SITE FOR RESIDUE CL A 403
[
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SAPs(SNPs)/Variants
(6, 6)
Info
(mutated residues are not available)
All SNPs/Variants
1: VAR_033016 (R95G, chain A, )
2: VAR_033017 (R155C, chain A, )
3: VAR_033018 (R155H, chain A, )
4: VAR_033019 (R155P, chain A, )
5: VAR_065910 (R159G, chain A, )
6: VAR_033020 (R159H, chain A, )
View:
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dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_033016
R
95
G
TERA_HUMAN
Disease (IBMPFD1)
---
A
R
95
G
2
UniProt
VAR_033017
R
155
C
TERA_HUMAN
Disease (IBMPFD1)
---
A
R
155
C
3
UniProt
VAR_033018
R
155
H
TERA_HUMAN
Disease (IBMPFD1)
---
A
R
155
H
4
UniProt
VAR_033019
R
155
P
TERA_HUMAN
Disease (IBMPFD1)
---
A
R
155
P
5
UniProt
VAR_065910
R
159
G
TERA_HUMAN
Disease (ALS14)
---
A
R
159
G
6
UniProt
VAR_033020
R
159
H
TERA_HUMAN
Disease (IBMPFD1)
---
A
R
159
H
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(0, 0)
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All PROSITE Patterns/Profiles
;
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End label:
Sorry, no Info available
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Exons
(0, 0)
Info
All Exons
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(2, 2)
Info
All SCOP Domains
1a: SCOP_d3qq7a1 (A:20-106)
2a: SCOP_d3qq7a2 (A:107-187)
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Classes
(
)
(
)
Folds
(
)
(
)
Superfamilies
(
)
(
)
Families
(
)
(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
All beta proteins
(24004)
Fold
:
Double psi beta-barrel
(111)
Superfamily
:
ADC-like
(88)
Family
:
Cdc48 N-terminal domain-like
(16)
Protein domain
:
Membrane fusion ATPase p97 N-terminal domain , P97-Nn
(10)
Human (Homo sapiens) [TaxId: 9606]
(5)
1a
d3qq7a1
A:20-106
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
Cdc48 domain 2-like
(22)
Superfamily
:
Cdc48 domain 2-like
(22)
Family
:
Cdc48 domain 2-like
(16)
Protein domain
:
Membrane fusion atpase p97 domain 2, P97-Nc
(10)
Human (Homo sapiens) [TaxId: 9606]
(5)
2a
d3qq7a2
A:107-187
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CATH Domains
(0, 0)
Info
all CATH domains
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Sorry, no Info available
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Pfam Domains
(2, 2)
Info
all PFAM domains
1a: PFAM_CDC48_2_3qq7A01 (A:125-187)
2a: PFAM_CDC48_N_3qq7A02 (A:25-108)
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Clans
(
)
(
)
Families
(
)
(
)
Organisms
(
)
(
)
Clan
:
Cdc48_2-like
(11)
Family
:
CDC48_2
(8)
Homo sapiens (Human)
(2)
1a
CDC48_2-3qq7A01
A:125-187
Clan
:
no clan defined [family: CDC48_N]
(7)
Family
:
CDC48_N
(7)
Homo sapiens (Human)
(2)
2a
CDC48_N-3qq7A02
A:25-108
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Chain A
Asymmetric Unit 1
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