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3QBM
Asym. Unit
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Asym.Unit (145 KB)
Biol.Unit 1 (138 KB)
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Title
:
CRYSTAL STRUCTURE OF A TETR TRANSCRIPTIONAL REGULATOR (CAUR_2221) FROM CHLOROFLEXUS AURANTIACUS J-10-FL AT 1.80 A RESOLUTION
Authors
:
Joint Center For Structural Genomics (Jcsg)
Date
:
13 Jan 11 (Deposition) - 02 Feb 11 (Release) - 20 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.80
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (1x)
Keywords
:
Dna/Rna-Binding Three-Helical Bundle, Structural Genomics, Joint Center For Structural Genomics, Jcsg, Protein Structure Initiative, Psi-Biology, Transcription, Transcription Regulator
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
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Reference
:
Joint Center For Structural Genomics (Jcsg)
Crystal Structure Of A Tetr Transcriptional Regulator (Caur_2221) From Chloroflexus Aurantiacus J-10-Fl At 1. 80 A Resolution
To Be Published
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Hetero Components
(4, 21)
Info
All Hetero Components
1a: MAGNESIUM ION (MGa)
1b: MAGNESIUM ION (MGb)
2a: SELENOMETHIONINE (MSEa)
2b: SELENOMETHIONINE (MSEb)
2c: SELENOMETHIONINE (MSEc)
2d: SELENOMETHIONINE (MSEd)
2e: SELENOMETHIONINE (MSEe)
2f: SELENOMETHIONINE (MSEf)
2g: SELENOMETHIONINE (MSEg)
2h: SELENOMETHIONINE (MSEh)
2i: SELENOMETHIONINE (MSEi)
2j: SELENOMETHIONINE (MSEj)
3a: DI(HYDROXYETHYL)ETHER (PEGa)
3b: DI(HYDROXYETHYL)ETHER (PEGb)
3c: DI(HYDROXYETHYL)ETHER (PEGc)
3d: DI(HYDROXYETHYL)ETHER (PEGd)
3e: DI(HYDROXYETHYL)ETHER (PEGe)
3f: DI(HYDROXYETHYL)ETHER (PEGf)
3g: DI(HYDROXYETHYL)ETHER (PEGg)
3h: DI(HYDROXYETHYL)ETHER (PEGh)
4a: TRIETHYLENE GLYCOL (PGEa)
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Label:
No.
Name
Count
Type
Full Name
1
MG
2
Ligand/Ion
MAGNESIUM ION
2
MSE
10
Mod. Amino Acid
SELENOMETHIONINE
3
PEG
8
Ligand/Ion
DI(HYDROXYETHYL)ETHER
4
PGE
1
Ligand/Ion
TRIETHYLENE GLYCOL
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Sites
(11, 11)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
View:
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No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
ILE A:110 , ASP A:113 , HOH A:238 , HOH A:240 , HOH B:239 , HOH B:241
BINDING SITE FOR RESIDUE MG A 200
02
AC2
SOFTWARE
THR A:115 , ASN A:116 , PGE A:210
BINDING SITE FOR RESIDUE PEG A 203
03
AC3
SOFTWARE
THR A:189 , THR A:192 , HOH A:275 , HOH A:363 , HOH A:442
BINDING SITE FOR RESIDUE PEG A 206
04
AC4
SOFTWARE
HOH A:501 , HOH A:502 , HOH A:503
BINDING SITE FOR RESIDUE PEG A 207
05
AC5
SOFTWARE
VAL A:151 , TYR A:190 , GLN A:194 , HOH A:376
BINDING SITE FOR RESIDUE PEG A 209
06
AC6
SOFTWARE
GLU A:51 , ALA A:54 , ASN A:116 , PEG A:203 , HOH A:246
BINDING SITE FOR RESIDUE PGE A 210
07
AC7
SOFTWARE
HOH A:312 , HOH A:313 , ILE B:110 , ASP B:113 , HOH B:311 , HOH B:314
BINDING SITE FOR RESIDUE MG B 201
08
AC8
SOFTWARE
HIS A:76 , LYS A:77 , THR A:82 , ALA B:143 , HOH B:318
BINDING SITE FOR RESIDUE PEG B 202
09
AC9
SOFTWARE
GLU B:51 , ASN B:116 , LEU B:119 , PEG B:205 , HOH B:411 , HOH B:466
BINDING SITE FOR RESIDUE PEG B 204
10
BC1
SOFTWARE
THR B:115 , ASN B:116 , PEG B:204 , HOH B:466
BINDING SITE FOR RESIDUE PEG B 205
11
BC2
SOFTWARE
GLU A:175 , ASP B:114 , ARG B:120
BINDING SITE FOR RESIDUE PEG B 208
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are not available)
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PROSITE Patterns/Profiles
(0, 0)
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Exons
(0, 0)
Info
All Exons
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(0, 0)
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CATH Domains
(0, 0)
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all CATH domains
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Pfam Domains
(2, 4)
Info
all PFAM domains
1a: PFAM_TetR_N_3qbmB01 (B:11-57)
1b: PFAM_TetR_N_3qbmB02 (B:11-57)
2a: PFAM_TetR_C_6_3qbmB03 (B:111-196)
2b: PFAM_TetR_C_6_3qbmB04 (B:111-196)
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Clans
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(
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Families
(
)
(
)
Organisms
(
)
(
)
Clan
:
HTH
(544)
Family
:
TetR_N
(84)
Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl)
(2)
1a
TetR_N-3qbmB01
B:11-57
1b
TetR_N-3qbmB02
B:11-57
Clan
:
TetR_C
(33)
Family
:
TetR_C_6
(1)
Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl)
(1)
2a
TetR_C_6-3qbmB03
B:111-196
2b
TetR_C_6-3qbmB04
B:111-196
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