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3Q1I
Asym. Unit
Info
Asym.Unit (76 KB)
Biol.Unit 1 (72 KB)
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(1)
Title
:
POLO-LIKE KINASE I POLO-BOX DOMAIN IN COMPLEX WITH FMPPPMSPSM PHOSPHOPEPTIDE FROM TCERG1
Authors
:
P. Sledz, M. Hyvonen, C. Abell
Date
:
17 Dec 10 (Deposition) - 27 Apr 11 (Release) - 27 Apr 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.40
Chains
:
Asym. Unit : A,E
Biol. Unit 1: A,E (1x)
Keywords
:
Kinase, Peptide Binding Protein, Plk1, Transferase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
P. Sledz, C. J. Stubbs, S. Lang, Y. Q. Yang, G. J. Mckenzie, A. R. Venkitaraman, M. Hyvonen, C. Abell
From Crystal Packing To Molecular Recognition: Prediction And Discovery Of A Binding Site On The Surface Of Polo-Like Kinase 1
Angew. Chem. Int. Ed. Engl. V. 50 4003 2011
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Hetero Components
(5, 5)
Info
All Hetero Components
1a: PENTAETHYLENE GLYCOL (1PEa)
2a: AMINO GROUP (NH2a)
3a: DI(HYDROXYETHYL)ETHER (PEGa)
4a: 2-(2-METHOXYETHOXY)ETHANOL (PG0a)
5a: PHOSPHOSERINE (SEPa)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
1PE
1
Ligand/Ion
PENTAETHYLENE GLYCOL
2
NH2
1
Mod. Amino Acid
AMINO GROUP
3
PEG
1
Ligand/Ion
DI(HYDROXYETHYL)ETHER
4
PG0
1
Ligand/Ion
2-(2-METHOXYETHOXY)ETHANOL
5
SEP
1
Mod. Amino Acid
PHOSPHOSERINE
[
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Sites
(2, 2)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
HOH A:93 , HOH A:101 , VAL A:415 , TYR A:485
BINDING SITE FOR RESIDUE 1PE A 595
2
AC2
SOFTWARE
HOH A:147 , THR A:477 , LYS A:480
BINDING SITE FOR RESIDUE PEG A 596
[
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SAPs(SNPs)/Variants
(2, 2)
Info
(mutated residues are not available)
All SNPs/Variants
1: VAR_041021 (L463H, chain A, )
2: VAR_041022 (R518H, chain A, )
View:
Select:
Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_041021
L
463
H
PLK1_HUMAN
Polymorphism
45569335
A
L
463
H
2
UniProt
VAR_041022
R
518
H
PLK1_HUMAN
Polymorphism
56027600
A
R
518
H
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
[
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]
PROSITE Patterns/Profiles
(1, 2)
Info
All PROSITE Patterns/Profiles
1: POLO_BOX (A:417-480|A:515-584)
;
View:
Select:
Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
POLO_BOX
PS50078
POLO box domain profile.
PLK1_HUMAN
417-480
515-584
2
A:417-480
A:515-584
[
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Exons
(6, 6)
Info
All Exons
Exon 1.3 (E:101-108)
Exon 2.6 (A:372-398)
Exon 2.7 (A:398-424)
Exon 2.8 (A:424-475)
Exon 2.9 (A:476-536 (gaps))
Exon 2.10a (A:537-594)
View:
Select:
Label:
All Exon Boundaries
1: Boundary 1.2/1.3
2: Boundary 1.3/1.4a
3: Boundary 2.5/2.6
4: Boundary 2.6/2.7
5: Boundary 2.7/2.8
6: Boundary 2.8/2.9
7: Boundary 2.9/2.10a
8: Boundary 2.10a/-
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1b
ENST00000296702
1b
ENSE00001958061
chr5:
145826875-145826971
97
TCRG1_HUMAN
1-20
20
0
-
-
1.2
ENST00000296702
2
ENSE00000875393
chr5:
145834619-145834844
226
TCRG1_HUMAN
20-95
76
0
-
-
1.3
ENST00000296702
3
ENSE00000875394
chr5:
145836746-145836898
153
TCRG1_HUMAN
96-146
51
1
E:101-108
8
1.4a
ENST00000296702
4a
ENSE00001026741
chr5:
145838447-145838900
454
TCRG1_HUMAN
147-298
152
0
-
-
1.6
ENST00000296702
6
ENSE00000875396
chr5:
145843114-145843356
243
TCRG1_HUMAN
298-379
82
0
-
-
1.7
ENST00000296702
7
ENSE00000766804
chr5:
145847904-145847966
63
TCRG1_HUMAN
379-400
22
0
-
-
1.8a
ENST00000296702
8a
ENSE00000766805
chr5:
145849107-145849307
201
TCRG1_HUMAN
400-467
68
0
-
-
1.9a
ENST00000296702
9a
ENSE00001126961
chr5:
145850199-145850311
113
TCRG1_HUMAN
467-504
38
0
-
-
1.10
ENST00000296702
10
ENSE00001126952
chr5:
145851051-145851139
89
TCRG1_HUMAN
505-534
30
0
-
-
1.11b
ENST00000296702
11b
ENSE00001126945
chr5:
145858056-145858216
161
TCRG1_HUMAN
534-588
55
0
-
-
1.12
ENST00000296702
12
ENSE00001126936
chr5:
145859418-145859474
57
TCRG1_HUMAN
588-607
20
0
-
-
1.13a
ENST00000296702
13a
ENSE00001126927
chr5:
145859591-145859657
67
TCRG1_HUMAN
607-629
23
0
-
-
1.14c
ENST00000296702
14c
ENSE00001126919
chr5:
145862155-145862290
136
TCRG1_HUMAN
629-674
46
0
-
-
1.15
ENST00000296702
15
ENSE00001126912
chr5:
145863103-145863192
90
TCRG1_HUMAN
675-704
30
0
-
-
1.16c
ENST00000296702
16c
ENSE00000766812
chr5:
145872483-145872601
119
TCRG1_HUMAN
705-744
40
0
-
-
1.17
ENST00000296702
17
ENSE00000766813
chr5:
145878099-145878249
151
TCRG1_HUMAN
744-794
51
0
-
-
1.19b
ENST00000296702
19b
ENSE00000766816
chr5:
145882938-145883102
165
TCRG1_HUMAN
795-849
55
0
-
-
1.20a
ENST00000296702
20a
ENSE00000766817
chr5:
145883387-145883569
183
TCRG1_HUMAN
850-910
61
0
-
-
1.23b
ENST00000296702
23b
ENSE00000766818
chr5:
145886591-145886770
180
TCRG1_HUMAN
911-970
60
0
-
-
1.24c
ENST00000296702
24c
ENSE00000766819
chr5:
145887436-145887519
84
TCRG1_HUMAN
971-998
28
0
-
-
1.25
ENST00000296702
25
ENSE00001082938
chr5:
145888708-145888808
101
TCRG1_HUMAN
999-1032
34
0
-
-
1.27d
ENST00000296702
27d
ENSE00001918127
chr5:
145890004-145891524
1521
TCRG1_HUMAN
1032-1098
67
0
-
-
2.1a
ENST00000300093
1a
ENSE00001107240
chr16:
23690143-23690661
519
PLK1_HUMAN
1-136
136
0
-
-
2.2b
ENST00000300093
2b
ENSE00001107217
chr16:
23691405-23691573
169
PLK1_HUMAN
137-193
57
0
-
-
2.3b
ENST00000300093
3b
ENSE00001107239
chr16:
23692235-23692379
145
PLK1_HUMAN
193-241
49
0
-
-
2.4
ENST00000300093
4
ENSE00001107237
chr16:
23693385-23693478
94
PLK1_HUMAN
241-272
32
0
-
-
2.5
ENST00000300093
5
ENSE00001107229
chr16:
23695191-23695410
220
PLK1_HUMAN
273-346
74
0
-
-
2.6
ENST00000300093
6
ENSE00001107234
chr16:
23698790-23698945
156
PLK1_HUMAN
346-398
53
1
A:372-398
27
2.7
ENST00000300093
7
ENSE00001107238
chr16:
23699989-23700066
78
PLK1_HUMAN
398-424
27
1
A:398-424
27
2.8
ENST00000300093
8
ENSE00001107241
chr16:
23700559-23700713
155
PLK1_HUMAN
424-475
52
1
A:424-475
52
2.9
ENST00000300093
9
ENSE00001107222
chr16:
23700815-23700997
183
PLK1_HUMAN
476-536
61
1
A:476-536 (gaps)
61
2.10a
ENST00000300093
10a
ENSE00001107226
chr16:
23701181-23701688
508
PLK1_HUMAN
537-603
67
1
A:537-594
58
[
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SCOP Domains
(0, 0)
Info
All SCOP Domains
View:
Select:
Label:
Sorry, no Info available
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CATH Domains
(0, 0)
Info
all CATH domains
View:
Select:
Label:
Sorry, no Info available
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Pfam Domains
(1, 2)
Info
all PFAM domains
1a: PFAM_POLO_box_3q1iA01 (A:515-584)
1b: PFAM_POLO_box_3q1iA02 (A:515-584)
View:
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Clans
(
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Families
(
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(
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Organisms
(
)
(
)
Clan
:
no clan defined [family: POLO_box]
(13)
Family
:
POLO_box
(13)
Homo sapiens (Human)
(12)
1a
POLO_box-3q1iA01
A:515-584
1b
POLO_box-3q1iA02
A:515-584
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Asymmetric Unit 1
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