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3PUW
Asym. Unit
Info
Asym.Unit (656 KB)
Biol.Unit 1 (646 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF AN OUTWARD-FACING MBP-MALTOSE TRANSPORTER COMPLEX BOUND TO ADP-ALF4
Authors
:
M. L. Oldham, J. Chen
Date
:
06 Dec 10 (Deposition) - 10 Aug 11 (Release) - 28 Sep 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.30
Chains
:
Asym. Unit : A,B,E,F,G
Biol. Unit 1: A,B,E,F,G (1x)
Keywords
:
Atp Binding Cassette Nucleotide Binding Domain Substrate Binding Protein Transmembrane Domain, Abc Transporter Importer Atpase, Atp Binding Maltodextrin Binding, Transmembrane Integral Membrane, Hydrolase-Transport Protein Complex
(Keyword Search:
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Reference
:
M. L. Oldham, J. Chen
Snapshots Of The Maltose Transporter During Atp Hydrolysis.
Proc. Natl. Acad. Sci. Usa V. 108 15152 2011
[
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Hetero Components
(6, 18)
Info
All Hetero Components
1a: ADENOSINE-5'-DIPHOSPHATE (ADPa)
1b: ADENOSINE-5'-DIPHOSPHATE (ADPb)
2a: TETRAFLUOROALUMINATE ION (ALFa)
2b: TETRAFLUOROALUMINATE ION (ALFb)
3a: MALTOSE (MALa)
4a: MAGNESIUM ION (MGa)
4b: MAGNESIUM ION (MGb)
5a: (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPY... (PGVa)
5b: (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPY... (PGVb)
5c: (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPY... (PGVc)
5d: (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPY... (PGVd)
5e: (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPY... (PGVe)
5f: (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPY... (PGVf)
5g: (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPY... (PGVg)
5h: (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPY... (PGVh)
5i: (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPY... (PGVi)
5j: (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPY... (PGVj)
6a: UNDECYL-MALTOSIDE (UMQa)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
ADP
2
Ligand/Ion
ADENOSINE-5'-DIPHOSPHATE
2
ALF
2
Ligand/Ion
TETRAFLUOROALUMINATE ION
3
MAL
1
Ligand/Ion
MALTOSE
4
MG
2
Ligand/Ion
MAGNESIUM ION
5
PGV
10
Ligand/Ion
(1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE
6
UMQ
1
Ligand/Ion
UNDECYL-MALTOSIDE
[
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Sites
(15, 15)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
THR F:291 , TYR F:325 , ASN F:376 , GLY F:380 , SER F:433 , PHE F:436 , ASN F:437 , ASN F:440 , HOH F:561 , HOH F:569
BINDING SITE FOR RESIDUE MAL F 2000
02
AC2
SOFTWARE
CYS F:304 , GLN F:307 , TRP F:308 , TYR F:400 , PRO F:410 , PHE F:411 , ASN F:413 , HOH F:557 , HOH F:567 , ARG G:12 , THR G:16
BINDING SITE FOR RESIDUE PGV F 4001
03
AC3
SOFTWARE
ARG F:66
BINDING SITE FOR RESIDUE PGV F 4002
04
AC4
SOFTWARE
PHE F:57
BINDING SITE FOR RESIDUE PGV F 4008
05
AC5
SOFTWARE
GLN A:253 , TRP A:267 , ASN E:282 , TYR E:283 , GLY E:289 , ASN F:121 , ARG F:202
BINDING SITE FOR RESIDUE UMQ F 5004
06
AC6
SOFTWARE
TRP G:86
BINDING SITE FOR RESIDUE PGV G 4003
07
AC7
SOFTWARE
LEU G:83
BINDING SITE FOR RESIDUE PGV G 4004
08
AC8
SOFTWARE
LEU G:63
BINDING SITE FOR RESIDUE PGV G 4005
09
AC9
SOFTWARE
TRP G:59 , LYS G:60
BINDING SITE FOR RESIDUE PGV G 4006
10
BC1
SOFTWARE
SER A:43 , GLN A:82 , HOH A:382 , HOH A:383 , ADP A:2501 , ALF A:3001
BINDING SITE FOR RESIDUE MG A 1501
11
BC2
SOFTWARE
SER B:43 , GLN B:82 , GLU B:159 , HOH B:382 , HOH B:383 , ADP B:2502 , ALF B:3002
BINDING SITE FOR RESIDUE MG B 1502
12
BC3
SOFTWARE
TRP A:13 , VAL A:18 , GLY A:39 , CYS A:40 , GLY A:41 , LYS A:42 , SER A:43 , THR A:44 , HOH A:382 , HOH A:383 , MG A:1501 , ALF A:3001 , ARG B:129 , ALA B:133 , SER B:135 , GLN B:138
BINDING SITE FOR RESIDUE ADP A 2501
13
BC4
SOFTWARE
SER A:38 , GLY A:39 , LYS A:42 , GLN A:82 , GLU A:159 , HIS A:192 , HOH A:382 , HOH A:383 , HOH A:384 , MG A:1501 , ADP A:2501 , SER B:135 , GLY B:136 , GLY B:137
BINDING SITE FOR RESIDUE ALF A 3001
14
BC5
SOFTWARE
ARG A:129 , ALA A:133 , SER A:135 , GLN A:138 , VAL B:18 , GLY B:39 , CYS B:40 , GLY B:41 , LYS B:42 , SER B:43 , THR B:44 , HOH B:382 , HOH B:383 , MG B:1502 , ALF B:3002
BINDING SITE FOR RESIDUE ADP B 2502
15
BC6
SOFTWARE
SER A:135 , GLY A:136 , GLY A:137 , SER B:38 , GLY B:39 , LYS B:42 , GLN B:82 , GLU B:159 , HIS B:192 , HOH B:382 , HOH B:383 , HOH B:384 , MG B:1502 , ADP B:2502
BINDING SITE FOR RESIDUE ALF B 3002
[
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
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Sorry, no Info available
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PROSITE Patterns/Profiles
(3, 5)
Info
All PROSITE Patterns/Profiles
1: ABC_TM1 (G:85-281,F:281-503)
2: SBP_BACTERIAL_1 (E:107-124)
3: ABC_TRANSPORTER_1 (A:134-148,B:134-148)
;
View:
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
ABC_TM1
PS50928
ABC transporter integral membrane type-1 domain profile.
MALG_ECOLI
85-281
1
G:85-281
MALF_ECOLI
281-505
1
F:281-503
2
SBP_BACTERIAL_1
PS01037
Bacterial extracellular solute-binding proteins, family 1 signature.
MALE_ECOLI
133-150
1
E:107-124
3
ABC_TRANSPORTER_1
PS00211
ABC transporters family signature.
MALK_ECOLI
134-148
2
A:134-148
B:134-148
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Exons
(0, 0)
Info
All Exons
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All Exon Boundaries
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(6, 8)
Info
All SCOP Domains
1a: SCOP_d3puwa2 (A:236-372)
1b: SCOP_d3puwb2 (B:236-369)
2a: SCOP_d3puwa1 (A:2-235)
2b: SCOP_d3puwb1 (B:2-235)
3a: SCOP_d3puwe_ (E:)
4a: SCOP_d3puwg_ (G:)
5a: SCOP_d3puwf2 (F:261-503)
6a: SCOP_d3puwf1 (F:10-260)
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(
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(
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Families
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(
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Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
All beta proteins
(24004)
Fold
:
OB-fold
(1179)
Superfamily
:
MOP-like
(40)
Family
:
ABC-transporter additional domain
(24)
Protein domain
:
Maltose transport protein MalK, C-terminal domain
(16)
Escherichia coli [TaxId: 562]
(15)
1a
d3puwa2
A:236-372
1b
d3puwb2
B:236-369
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
P-loop containing nucleoside triphosphate hydrolases
(2083)
Superfamily
:
P-loop containing nucleoside triphosphate hydrolases
(2083)
Family
:
ABC transporter ATPase domain-like
(94)
Protein domain
:
Maltose transport protein MalK, N-terminal domain
(16)
Escherichia coli [TaxId: 562]
(15)
2a
d3puwa1
A:2-235
2b
d3puwb1
B:2-235
Fold
:
Periplasmic binding protein-like II
(813)
Superfamily
:
Periplasmic binding protein-like II
(813)
Family
:
Phosphate binding protein-like
(463)
Protein domain
:
automated matches
(76)
Escherichia coli K-12 [TaxId: 83333]
(12)
3a
d3puwe_
E:
Class
:
Membrane and cell surface proteins and peptides
(2046)
Fold
:
MetI-like
(24)
Superfamily
:
MetI-like
(24)
Family
:
MetI-like
(24)
Protein domain
:
automated matches
(8)
Escherichia coli K-12 [TaxId: 83333]
(8)
4a
d3puwg_
G:
Protein domain
:
Maltose transport system permease protein MalF
(10)
Escherichia coli [TaxId: 562]
(10)
5a
d3puwf2
F:261-503
Class
:
Multi-domain proteins (alpha and beta)
(2421)
Fold
:
MalF N-terminal region-like
(10)
Superfamily
:
MalF N-terminal region-like
(10)
Family
:
MalF N-terminal region-like
(10)
Protein domain
:
Maltose transport system permease protein MalF
(10)
Escherichia coli [TaxId: 562]
(10)
6a
d3puwf1
F:10-260
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CATH Domains
(0, 0)
Info
all CATH domains
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Pfam Domains
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