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3PSL
Biol. Unit 1
Info
Asym.Unit (203 KB)
Biol.Unit 1 (99 KB)
Biol.Unit 2 (101 KB)
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(1)
Title
:
FINE-TUNING THE STIMULATION OF MLL1 METHYLTRANSFERASE ACTIVITY BY A HISTONE H3 BASED PEPTIDE MIMETIC
Authors
:
V. Avdic, P. Zhang, S. Lanouette, A. Voronova, I. Skerjanc, J. -F. Coutu
Date
:
01 Dec 10 (Deposition) - 22 Dec 10 (Release) - 24 Aug 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.70
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A,C (1x)
Biol. Unit 2: B,D (1x)
Keywords
:
Chromatin, Histone, Beta-Propeller, Scaffolding, Rbbp5, Mll1, Nucleus, Transcription - Transcription Inhibitor Complex, Transcription-Transcription Inhibitor Complex
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
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Reference
:
V. Avdic, P. Zhang, S. Lanouette, A. Voronova, I. Skerjanc, J. F. Couture
Fine-Tuning The Stimulation Of Mll1 Methyltransferase Activity By A Histone H3-Based Peptide Mimetic.
Faseb J. V. 25 960 2011
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Hetero Components
(1, 1)
Info
All Hetero Components
1a: ACETYL GROUP (ACEa)
1b: ACETYL GROUP (ACEb)
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No.
Name
Count
Type
Full Name
1
ACE
1
Mod. Amino Acid
ACETYL GROUP
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Sites
(2, 2)
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1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
HOH A:13 , ALA A:47 , VAL A:48 , SER A:49 , GLY A:89 , ILE A:90 , SER A:91 , ASP A:107 , TYR A:131 , PHE A:133 , CYS A:261 , PHE A:263 , GLU A:322 , HOH A:368 , HOH B:407 , HOH C:11 , HOH C:74 , HOH C:157
BINDING SITE FOR CHAIN C OF N-ALPHA ACETYLATED FORM OF HISTONE H3
2
AC2
SOFTWARE
GLU A:151 , HIS A:170 , HOH B:9 , ALA B:47 , SER B:49 , GLY B:89 , ILE B:90 , SER B:91 , ASP B:107 , TYR B:131 , PHE B:133 , TYR B:260 , CYS B:261 , PHE B:263 , HOH B:336 , HOH B:349 , HOH B:363 , HOH B:454 , HOH D:12 , HOH D:64 , HOH D:68 , HOH D:479
BINDING SITE FOR CHAIN D OF N-ALPHA ACETYLATED FORM OF HISTONE H3
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SAPs(SNPs)/Variants
(0, 0)
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PROSITE Patterns/Profiles
(1, 4)
Info
All PROSITE Patterns/Profiles
1: WD_REPEATS_1 (A:102-116,A:144-158,A:186-200,A:27...)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
WD_REPEATS_1
PS00678
Trp-Asp (WD) repeats signature.
WDR5_HUMAN
102-116
144-158
186-200
274-288
4
A:102-116
-
A:144-158
-
A:186-200
-
A:274-288
-
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Exons
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SCOP Domains
(1, 2)
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All SCOP Domains
1a: SCOP_d3psla_ (A:)
1b: SCOP_d3pslb_ (B:)
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Class
:
All beta proteins
(24004)
Fold
:
7-bladed beta-propeller
(245)
Superfamily
:
WD40 repeat-like
(95)
Family
:
automated matches
(36)
Protein domain
:
automated matches
(36)
Human (Homo sapiens) [TaxId: 9606]
(34)
1a
d3psla_
A:
1b
d3pslb_
B:
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CATH Domains
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Pfam Domains
(1, 14)
Info
all PFAM domains
1a: PFAM_WD40_3pslB01 (B:291-331)
1b: PFAM_WD40_3pslB02 (B:291-331)
1c: PFAM_WD40_3pslB03 (B:291-331)
1d: PFAM_WD40_3pslB04 (B:291-331)
1e: PFAM_WD40_3pslB05 (B:291-331)
1f: PFAM_WD40_3pslB06 (B:291-331)
1g: PFAM_WD40_3pslB07 (B:291-331)
1h: PFAM_WD40_3pslB08 (B:291-331)
1i: PFAM_WD40_3pslB09 (B:291-331)
1j: PFAM_WD40_3pslB10 (B:291-331)
1k: PFAM_WD40_3pslB11 (B:291-331)
1l: PFAM_WD40_3pslB12 (B:291-331)
1m: PFAM_WD40_3pslB13 (B:291-331)
1n: PFAM_WD40_3pslB14 (B:291-331)
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Clan
:
Beta_propeller
(192)
Family
:
WD40
(64)
Homo sapiens (Human)
(18)
1a
WD40-3pslB01
B:291-331
1b
WD40-3pslB02
B:291-331
1c
WD40-3pslB03
B:291-331
1d
WD40-3pslB04
B:291-331
1e
WD40-3pslB05
B:291-331
1f
WD40-3pslB06
B:291-331
1g
WD40-3pslB07
B:291-331
1h
WD40-3pslB08
B:291-331
1i
WD40-3pslB09
B:291-331
1j
WD40-3pslB10
B:291-331
1k
WD40-3pslB11
B:291-331
1l
WD40-3pslB12
B:291-331
1m
WD40-3pslB13
B:291-331
1n
WD40-3pslB14
B:291-331
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Asymmetric Unit 1
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Asym.Unit (203 KB)
Header - Asym.Unit
Biol.Unit 1 (99 KB)
Header - Biol.Unit 1
Biol.Unit 2 (101 KB)
Header - Biol.Unit 2
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