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3PQA
Asym. Unit
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Asym.Unit (622 KB)
Biol.Unit 1 (615 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE GAPN FROM METHANOCALDOCOCCUS JANNASCHII DSM 2661
Authors
:
V. N. Malashkevich, R. Toro, R. Seidel, S. Garrett, R. Foti, S. C. Almo, N Structural Genomics Research Consortium (Nysgrc)
Date
:
25 Nov 10 (Deposition) - 15 Dec 10 (Release) - 16 Mar 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.50
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A,B,C,D (1x)
Keywords
:
Structural Genomics, Protein Structure Initiative, Nysgrc, Psi- Biology, Oxidoreductase, New York Structural Genomics Research Consortium
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Reference
:
V. N. Malashkevich, R. Toro, R. Seidel, S. Garrett, R. Foti, S. C. Almo
Crystal Structure Of Glyceraldehyde-3-Phosphate Dehydrogenase Gapn From Methanocaldococcus Jannaschii Dsm 2661
To Be Published
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Hetero Components
(1, 7)
Info
All Hetero Components
1a: SULFATE ION (SO4a)
1b: SULFATE ION (SO4b)
1c: SULFATE ION (SO4c)
1d: SULFATE ION (SO4d)
1e: SULFATE ION (SO4e)
1f: SULFATE ION (SO4f)
1g: SULFATE ION (SO4g)
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No.
Name
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Type
Full Name
1
SO4
7
Ligand/Ion
SULFATE ION
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Sites
(7, 7)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
6: AC6 (SOFTWARE)
7: AC7 (SOFTWARE)
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Name
Evidence
Residues
Description
1
AC1
SOFTWARE
HIS C:164 , PRO C:165 , SER C:166 , SER C:167 , GLY C:199 , GLY C:201 , HOH C:1426
BINDING SITE FOR RESIDUE SO4 C 487
2
AC2
SOFTWARE
HIS A:164 , SER A:166 , SER A:167 , GLY A:201 , HOH A:530 , HOH A:873
BINDING SITE FOR RESIDUE SO4 A 487
3
AC3
SOFTWARE
HIS B:164 , SER B:166 , SER B:167 , GLY B:201 , HOH B:1142 , HOH B:1441
BINDING SITE FOR RESIDUE SO4 B 487
4
AC4
SOFTWARE
ILE A:269
BINDING SITE FOR RESIDUE SO4 A 488
5
AC5
SOFTWARE
HIS D:164 , SER D:166 , SER D:167 , GLY D:199 , GLY D:201 , HOH D:1069
BINDING SITE FOR RESIDUE SO4 D 487
6
AC6
SOFTWARE
GLN C:90 , ILE C:269 , ASP C:313 , HOH C:621 , HOH C:1260
BINDING SITE FOR RESIDUE SO4 C 488
7
AC7
SOFTWARE
ARG D:33 , HOH D:555 , HOH D:598
BINDING SITE FOR RESIDUE SO4 D 488
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Exons
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Pfam Domains
(1, 4)
Info
all PFAM domains
1a: PFAM_Aldedh_3pqaD01 (D:10-460)
1b: PFAM_Aldedh_3pqaD02 (D:10-460)
1c: PFAM_Aldedh_3pqaD03 (D:10-460)
1d: PFAM_Aldedh_3pqaD04 (D:10-460)
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Clan
:
ALDH-like
(49)
Family
:
Aldedh
(45)
Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) (Meth
(2)
1a
Aldedh-3pqaD01
D:10-460
1b
Aldedh-3pqaD02
D:10-460
1c
Aldedh-3pqaD03
D:10-460
1d
Aldedh-3pqaD04
D:10-460
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