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3PMG
Biol. Unit 1
Info
Asym.Unit (243 KB)
Biol.Unit 1 (124 KB)
Biol.Unit 2 (118 KB)
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(1)
Title
:
STRUCTURE OF RABBIT MUSCLE PHOSPHOGLUCOMUTASE AT 2.4 ANGSTROMS RESOLUTION. USE OF FREEZING POINT DEPRESSANT AND REDUCED TEMPERATURE TO ENHANCE DIFFRACTIVITY
Authors
:
W. J. Ray Junior, Y. Liu, S. Baranidharan
Date
:
02 Mar 95 (Deposition) - 07 Dec 95 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.40
Chains
:
Asym. Unit : A,B
Biol. Unit 1: B (1x)
Biol. Unit 2: A (1x)
Keywords
:
Phosphoglucomutase, Phosphotransferase
(Keyword Search:
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Reference
:
Y. Liu, W. J. Ray, S. Baranidharan
Structure Of Rabbit Muscle Phosphoglucomutase Refined At 2. 4 A Resolution.
Acta Crystallogr. , Sect. D V. 53 392 1997
(for further references see the
PDB file header
)
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Hetero Components
(1, 1)
Info
All Hetero Components
1a: MAGNESIUM ION (MGa)
1b: MAGNESIUM ION (MGb)
2a: PHOSPHOSERINE (SEPa)
2b: PHOSPHOSERINE (SEPb)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
MG
-1
Ligand/Ion
MAGNESIUM ION
2
SEP
1
Mod. Amino Acid
PHOSPHOSERINE
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Sites
(2, 2)
Info
All Sites
1: AC2 (SOFTWARE)
2: MBB (AUTHOR)
View:
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Label:
No.
Name
Evidence
Residues
Description
1
AC2
SOFTWARE
SEP B:116 , ASP B:287 , ASP B:289 , ASP B:291 , HOH B:758
BINDING SITE FOR RESIDUE MG B 562
2
MBB
AUTHOR
ASP B:287 , ASP B:289 , ASP B:291 , SEP B:116
METAL BINDING SITE IN MONOMER B
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are only available for the asymmetric unit)
All SNPs/Variants
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Sorry, no Info available
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PROSITE Patterns/Profiles
(1, 1)
Info
All PROSITE Patterns/Profiles
1: PGM_PMM (B:110-119)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
PGM_PMM
PS00710
Phosphoglucomutase and phosphomannomutase phosphoserine signature.
PGM1_RABIT
111-120
1
-
B:110-119
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Exons
(0, 0)
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(2, 8)
Info
All SCOP Domains
1a: SCOP_d3pmga4 (A:421-561)
1b: SCOP_d3pmgb4 (B:421-561)
2a: SCOP_d3pmga1 (A:1-190)
2b: SCOP_d3pmga2 (A:191-303)
2c: SCOP_d3pmga3 (A:304-420)
2d: SCOP_d3pmgb1 (B:1-190)
2e: SCOP_d3pmgb2 (B:191-303)
2f: SCOP_d3pmgb3 (B:304-420)
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)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
TBP-like
(289)
Superfamily
:
Phosphoglucomutase, C-terminal domain
(24)
Family
:
Phosphoglucomutase, C-terminal domain
(21)
Protein domain
:
Phosphoglucomutase
(6)
Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
(6)
1a
d3pmga4
A:421-561
1b
d3pmgb4
B:421-561
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
Phosphoglucomutase, first 3 domains
(23)
Superfamily
:
Phosphoglucomutase, first 3 domains
(23)
Family
:
Phosphoglucomutase, first 3 domains
(20)
Protein domain
:
Phosphoglucomutase
(6)
Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
(6)
2a
d3pmga1
A:1-190
2b
d3pmga2
A:191-303
2c
d3pmga3
A:304-420
2d
d3pmgb1
B:1-190
2e
d3pmgb2
B:191-303
2f
d3pmgb3
B:304-420
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CATH Domains
(2, 8)
Info
all CATH domains
1a: CATH_3pmgA04 (A:401-561)
1b: CATH_3pmgB04 (B:401-561)
2a: CATH_3pmgA02 (A:198-300)
2b: CATH_3pmgB02 (B:198-300)
2c: CATH_3pmgA03 (A:301-400)
2d: CATH_3pmgB03 (B:301-400)
2e: CATH_3pmgA01 (A:1-197)
2f: CATH_3pmgB01 (B:1-197)
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)
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)
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)
(
)
Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
2-Layer Sandwich
(8480)
Topology
:
TATA-Binding Protein
(118)
Homologous Superfamily
:
Major birch pollen allergen Bet v 1
(22)
Rabbit (Oryctolagus cuniculus)
(6)
1a
3pmgA04
A:401-561
1b
3pmgB04
B:401-561
Architecture
:
3-Layer(aba) Sandwich
(12045)
Topology
:
Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 3
(24)
Homologous Superfamily
:
Alpha-D-Glucose-1,6-Bisphosphate, subunit A, domain 3
(24)
Rabbit (Oryctolagus cuniculus)
(6)
2a
3pmgA02
A:198-300
2b
3pmgB02
B:198-300
2c
3pmgA03
A:301-400
2d
3pmgB03
B:301-400
2e
3pmgA01
A:1-197
2f
3pmgB01
B:1-197
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Pfam Domains
(4, 8)
Info
all PFAM domains
1a: PFAM_PGM_PMM_III_3pmgB01 (B:305-419)
1b: PFAM_PGM_PMM_III_3pmgB02 (B:305-419)
2a: PFAM_PGM_PMM_II_3pmgB03 (B:192-300)
2b: PFAM_PGM_PMM_II_3pmgB04 (B:192-300)
3a: PFAM_PGM_PMM_IV_3pmgB05 (B:441-544)
3b: PFAM_PGM_PMM_IV_3pmgB06 (B:441-544)
4a: PFAM_PGM_PMM_I_3pmgB07 (B:13-157)
4b: PFAM_PGM_PMM_I_3pmgB08 (B:13-157)
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)
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)
Organisms
(
)
(
)
Clan
:
no clan defined [family: PGM_PMM_III]
(17)
Family
:
PGM_PMM_III
(17)
Oryctolagus cuniculus (Rabbit)
(4)
1a
PGM_PMM_III-3pmgB01
B:305-419
1b
PGM_PMM_III-3pmgB02
B:305-419
Clan
:
no clan defined [family: PGM_PMM_II]
(17)
Family
:
PGM_PMM_II
(17)
Oryctolagus cuniculus (Rabbit)
(4)
2a
PGM_PMM_II-3pmgB03
B:192-300
2b
PGM_PMM_II-3pmgB04
B:192-300
Clan
:
no clan defined [family: PGM_PMM_IV]
(18)
Family
:
PGM_PMM_IV
(18)
Oryctolagus cuniculus (Rabbit)
(4)
3a
PGM_PMM_IV-3pmgB05
B:441-544
3b
PGM_PMM_IV-3pmgB06
B:441-544
Clan
:
no clan defined [family: PGM_PMM_I]
(17)
Family
:
PGM_PMM_I
(17)
Oryctolagus cuniculus (Rabbit)
(4)
4a
PGM_PMM_I-3pmgB07
B:13-157
4b
PGM_PMM_I-3pmgB08
B:13-157
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Chain B
Asymmetric Unit 1
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Asym.Unit (243 KB)
Header - Asym.Unit
Biol.Unit 1 (124 KB)
Header - Biol.Unit 1
Biol.Unit 2 (118 KB)
Header - Biol.Unit 2
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