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3PJA
Asym. Unit
Info
Asym.Unit (904 KB)
Biol.Unit 1 (599 KB)
Biol.Unit 2 (595 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF HUMAN C3PO COMPLEX
Authors
:
N. Huang, H. Zhang
Date
:
09 Nov 10 (Deposition) - 11 May 11 (Release) - 22 Jun 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
3.00
Chains
:
Asym. Unit : A,B,C,D,E,F,G,H,I,J,K,L
Biol. Unit 1: A,B,C,D,E,F,K,L (1x)
Biol. Unit 2: G,H,I,J (2x)
Keywords
:
7 Alpha Helical Bundle, Ribonuclease, Hydrolase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
X. Ye, N. Huang, Y. Liu, Z. Paroo, C. Huerta, P. Li, S. Chen, Q. Liu, H. Zhang
Structure Of C3Po And Mechanism Of Human Risc Activation.
Nat. Struct. Mol. Biol. V. 18 650 2011
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Hetero Components
(0, 0)
Info
All Hetero Components
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Sites
(0, 0)
Info
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
(0, 0)
Info
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;
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End label:
Sorry, no Info available
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Exons
(6, 54)
Info
All Exons
Exon 1.2a (A:2-22 | B:2-22 | C:1-22 | D:2-22 ...)
Exon 1.4b (A:23-54 (gaps) | B:23-54 | C:23-54...)
Exon 1.5 (A:54-86 | B:54-86 | C:54-86 | D:54...)
Exon 1.6 (A:86-125 | B:86-125 | C:86-125 | D...)
Exon 1.7b (A:125-151 | B:125-151 | C:125-151 ...)
Exon 1.8h (A:152-218 | B:152-218 | C:152-219 ...)
View:
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All Exon Boundaries
1: Boundary -/1.2a
2: Boundary 1.2a/1.4b
3: Boundary 1.4b/1.5
4: Boundary 1.5/1.6
5: Boundary 1.6/1.7b
6: Boundary 1.7b/1.8h
7: Boundary 1.8h/-
View:
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.2a
ENST00000389682
2a
ENSE00001506653
chr2:
122513109-122513421
313
TSN_HUMAN
1-22
22
9
A:2-22
B:2-22
C:1-22
D:2-22
E:1-22
F:1-22
G:1-22
H:2-22
I:2-22
21
21
22
21
22
22
22
21
21
1.4b
ENST00000389682
4b
ENSE00001506652
chr2:
122514816-122514909
94
TSN_HUMAN
23-54
32
9
A:23-54 (gaps)
B:23-54
C:23-54 (gaps)
D:23-54 (gaps)
E:23-54 (gaps)
F:23-54 (gaps)
G:23-54 (gaps)
H:23-54
I:23-54 (gaps)
32
32
32
32
32
32
32
32
32
1.5
ENST00000389682
5
ENSE00001506651
chr2:
122516286-122516382
97
TSN_HUMAN
54-86
33
9
A:54-86
B:54-86
C:54-86
D:54-86
E:54-86
F:54-86
G:54-86
H:54-86
I:54-86
33
33
33
33
33
33
33
33
33
1.6
ENST00000389682
6
ENSE00001506650
chr2:
122518985-122519100
116
TSN_HUMAN
86-125
40
9
A:86-125
B:86-125
C:86-125
D:86-125
E:86-125
F:86-125
G:86-125
H:86-125
I:86-125
40
40
40
40
40
40
40
40
40
1.7b
ENST00000389682
7b
ENSE00001506649
chr2:
122520581-122520660
80
TSN_HUMAN
125-151
27
9
A:125-151
B:125-151
C:125-151
D:125-151
E:125-151
F:125-151
G:125-151
H:125-151
I:125-151
27
27
27
27
27
27
27
27
27
1.8h
ENST00000389682
8h
ENSE00001506648
chr2:
122522710-122525429
2720
TSN_HUMAN
152-228
77
9
A:152-218
B:152-218
C:152-219
D:152-218
E:152-218
F:152-219
G:152-218
H:152-217
I:152-219
67
67
68
67
67
68
67
66
68
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SCOP Domains
(1, 9)
Info
All SCOP Domains
1a: SCOP_d3pjaa_ (A:)
1b: SCOP_d3pjab_ (B:)
1c: SCOP_d3pjac_ (C:)
1d: SCOP_d3pjad_ (D:)
1e: SCOP_d3pjae_ (E:)
1f: SCOP_d3pjaf_ (F:)
1g: SCOP_d3pjag_ (G:)
1h: SCOP_d3pjah_ (H:)
1i: SCOP_d3pjai_ (I:)
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(
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Class
:
All alpha proteins
(14657)
Fold
:
alpha-alpha superhelix
(690)
Superfamily
:
Translin
(5)
Family
:
Translin
(4)
Protein domain
:
automated matches
(2)
Human (Homo sapiens) [TaxId: 9606]
(2)
1a
d3pjaa_
A:
1b
d3pjab_
B:
1c
d3pjac_
C:
1d
d3pjad_
D:
1e
d3pjae_
E:
1f
d3pjaf_
F:
1g
d3pjag_
G:
1h
d3pjah_
H:
1i
d3pjai_
I:
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CATH Domains
(0, 0)
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Pfam Domains
(1, 12)
Info
all PFAM domains
1a: PFAM_Translin_3pjaL01 (L:50-265)
1b: PFAM_Translin_3pjaL02 (L:50-265)
1c: PFAM_Translin_3pjaL03 (L:50-265)
1d: PFAM_Translin_3pjaI01 (I:18-217)
1e: PFAM_Translin_3pjaI02 (I:18-217)
1f: PFAM_Translin_3pjaI03 (I:18-217)
1g: PFAM_Translin_3pjaI04 (I:18-217)
1h: PFAM_Translin_3pjaI05 (I:18-217)
1i: PFAM_Translin_3pjaI06 (I:18-217)
1j: PFAM_Translin_3pjaI07 (I:18-217)
1k: PFAM_Translin_3pjaI08 (I:18-217)
1l: PFAM_Translin_3pjaI09 (I:18-217)
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Clan
:
no clan defined [family: Translin]
(5)
Family
:
Translin
(5)
Homo sapiens (Human)
(2)
1a
Translin-3pjaL01
L:50-265
1b
Translin-3pjaL02
L:50-265
1c
Translin-3pjaL03
L:50-265
1d
Translin-3pjaI01
I:18-217
1e
Translin-3pjaI02
I:18-217
1f
Translin-3pjaI03
I:18-217
1g
Translin-3pjaI04
I:18-217
1h
Translin-3pjaI05
I:18-217
1i
Translin-3pjaI06
I:18-217
1j
Translin-3pjaI07
I:18-217
1k
Translin-3pjaI08
I:18-217
1l
Translin-3pjaI09
I:18-217
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Asym.Unit (904 KB)
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