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3PIP
Asym. Unit
Info
Asym.Unit (3.5 MB)
Biol.Unit 1, α-C (3.5 MB)
Biol.Unit 1 (3.5 MB)
(using Jmol or JSmol)
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(1)
Title
:
CRYSTAL STRUCTURE OF THE SYNERGISTIC ANTIBIOTIC PAIR LANKAMYCIN AND LANKACIDIN IN COMPLEX WITH THE LARGE RIBOSOMAL SUBUNIT
Authors
:
M. J. Belousoff, T. Shapira, A. Bashan, E. Zimmerman, H. Kinashi, H. Roz A. Yonath
Date
:
07 Nov 10 (Deposition) - 23 Feb 11 (Release) - 02 Mar 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
3.45
Chains
:
Asym. Unit : A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,1,2,3,4
Biol. Unit 1: A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,1,2,3,4 (1x)
Keywords
:
Ribosome, Large Ribosomal Subunit, 50S, Ribonucleoprotein, Ribosomal Protein, Rna-Binding, Rrna-Binding, Trna-Binding, Lankamycin, Lankacidin, Macrolide, Ribosome-Antibiotic Complex
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
M. J. Belousoff, T. Shapira, A. Bashan, E. Zimmerman, H. Rozenberg, K. Arakawa, H. Kinashi, A. Yonath
Crystal Structure Of The Synergistic Antibiotic Pair, Lankamycin And Lankacidin, In Complex With The Large Ribosomal Subunit.
Proc. Natl. Acad. Sci. Usa V. 108 2717 2011
[
close entry info
]
Hetero Components
(5, 84)
Info
All Hetero Components
1a: POTASSIUM ION (Ka)
1b: POTASSIUM ION (Kb)
1c: POTASSIUM ION (Kc)
1d: POTASSIUM ION (Kd)
2a: N-[(1S,2R,3E,5E,7S,9E,11E,13S,15R,... (LC2a)
3a: LANKAMYCIN (LMAa)
4a: MAGNESIUM ION (MGa)
4aa: MAGNESIUM ION (MGaa)
4ab: MAGNESIUM ION (MGab)
4ac: MAGNESIUM ION (MGac)
4ad: MAGNESIUM ION (MGad)
4ae: MAGNESIUM ION (MGae)
4af: MAGNESIUM ION (MGaf)
4ag: MAGNESIUM ION (MGag)
4ah: MAGNESIUM ION (MGah)
4ai: MAGNESIUM ION (MGai)
4aj: MAGNESIUM ION (MGaj)
4ak: MAGNESIUM ION (MGak)
4al: MAGNESIUM ION (MGal)
4am: MAGNESIUM ION (MGam)
4an: MAGNESIUM ION (MGan)
4ao: MAGNESIUM ION (MGao)
4ap: MAGNESIUM ION (MGap)
4aq: MAGNESIUM ION (MGaq)
4ar: MAGNESIUM ION (MGar)
4as: MAGNESIUM ION (MGas)
4at: MAGNESIUM ION (MGat)
4au: MAGNESIUM ION (MGau)
4av: MAGNESIUM ION (MGav)
4aw: MAGNESIUM ION (MGaw)
4ax: MAGNESIUM ION (MGax)
4ay: MAGNESIUM ION (MGay)
4az: MAGNESIUM ION (MGaz)
4b: MAGNESIUM ION (MGb)
4ba: MAGNESIUM ION (MGba)
4bb: MAGNESIUM ION (MGbb)
4bc: MAGNESIUM ION (MGbc)
4bd: MAGNESIUM ION (MGbd)
4be: MAGNESIUM ION (MGbe)
4bf: MAGNESIUM ION (MGbf)
4bg: MAGNESIUM ION (MGbg)
4bh: MAGNESIUM ION (MGbh)
4bi: MAGNESIUM ION (MGbi)
4bj: MAGNESIUM ION (MGbj)
4bk: MAGNESIUM ION (MGbk)
4bl: MAGNESIUM ION (MGbl)
4bm: MAGNESIUM ION (MGbm)
4bn: MAGNESIUM ION (MGbn)
4bo: MAGNESIUM ION (MGbo)
4bp: MAGNESIUM ION (MGbp)
4bq: MAGNESIUM ION (MGbq)
4br: MAGNESIUM ION (MGbr)
4bs: MAGNESIUM ION (MGbs)
4bt: MAGNESIUM ION (MGbt)
4bu: MAGNESIUM ION (MGbu)
4c: MAGNESIUM ION (MGc)
4d: MAGNESIUM ION (MGd)
4e: MAGNESIUM ION (MGe)
4f: MAGNESIUM ION (MGf)
4g: MAGNESIUM ION (MGg)
4h: MAGNESIUM ION (MGh)
4i: MAGNESIUM ION (MGi)
4j: MAGNESIUM ION (MGj)
4k: MAGNESIUM ION (MGk)
4l: MAGNESIUM ION (MGl)
4m: MAGNESIUM ION (MGm)
4n: MAGNESIUM ION (MGn)
4o: MAGNESIUM ION (MGo)
4p: MAGNESIUM ION (MGp)
4q: MAGNESIUM ION (MGq)
4r: MAGNESIUM ION (MGr)
4s: MAGNESIUM ION (MGs)
4t: MAGNESIUM ION (MGt)
4u: MAGNESIUM ION (MGu)
4v: MAGNESIUM ION (MGv)
4w: MAGNESIUM ION (MGw)
4x: MAGNESIUM ION (MGx)
4y: MAGNESIUM ION (MGy)
4z: MAGNESIUM ION (MGz)
5a: SODIUM ION (NAa)
5b: SODIUM ION (NAb)
5c: SODIUM ION (NAc)
5d: SODIUM ION (NAd)
5e: SODIUM ION (NAe)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
K
4
Ligand/Ion
POTASSIUM ION
2
LC2
1
Ligand/Ion
N-[(1S,2R,3E,5E,7S,9E,11E,13S,15R,19R)-7,13-DIHYDROXY-1,4,10,19-TETRAMETHYL-17,18-DIOXO-16-OXABICYCLO[13.2.2]NONADECA-3,5,9,11-TETRAEN-2-YL]-2-OXOPROPANAMIDE
3
LMA
1
Ligand/Ion
LANKAMYCIN
4
MG
73
Ligand/Ion
MAGNESIUM ION
5
NA
5
Ligand/Ion
SODIUM ION
[
close Hetero Component info
]
Sites
(75, 75)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
17: BC8 (SOFTWARE)
18: BC9 (SOFTWARE)
19: CC1 (SOFTWARE)
20: CC2 (SOFTWARE)
21: CC3 (SOFTWARE)
22: CC4 (SOFTWARE)
23: CC5 (SOFTWARE)
24: CC6 (SOFTWARE)
25: CC7 (SOFTWARE)
26: CC8 (SOFTWARE)
27: CC9 (SOFTWARE)
28: DC1 (SOFTWARE)
29: DC2 (SOFTWARE)
30: DC3 (SOFTWARE)
31: DC4 (SOFTWARE)
32: DC5 (SOFTWARE)
33: DC6 (SOFTWARE)
34: DC7 (SOFTWARE)
35: DC8 (SOFTWARE)
36: DC9 (SOFTWARE)
37: EC1 (SOFTWARE)
38: EC2 (SOFTWARE)
39: EC3 (SOFTWARE)
40: EC4 (SOFTWARE)
41: EC5 (SOFTWARE)
42: EC6 (SOFTWARE)
43: EC7 (SOFTWARE)
44: EC8 (SOFTWARE)
45: EC9 (SOFTWARE)
46: FC1 (SOFTWARE)
47: FC2 (SOFTWARE)
48: FC3 (SOFTWARE)
49: FC4 (SOFTWARE)
50: FC5 (SOFTWARE)
51: FC6 (SOFTWARE)
52: FC7 (SOFTWARE)
53: FC8 (SOFTWARE)
54: FC9 (SOFTWARE)
55: GC1 (SOFTWARE)
56: GC2 (SOFTWARE)
57: GC3 (SOFTWARE)
58: GC4 (SOFTWARE)
59: GC5 (SOFTWARE)
60: GC6 (SOFTWARE)
61: GC7 (SOFTWARE)
62: GC8 (SOFTWARE)
63: GC9 (SOFTWARE)
64: HC1 (SOFTWARE)
65: HC2 (SOFTWARE)
66: HC3 (SOFTWARE)
67: HC4 (SOFTWARE)
68: HC5 (SOFTWARE)
69: HC6 (SOFTWARE)
70: HC7 (SOFTWARE)
71: HC8 (SOFTWARE)
72: HC9 (SOFTWARE)
73: IC1 (SOFTWARE)
74: IC2 (SOFTWARE)
75: IC3 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
G X:2044 , A X:2430 , C X:2431 , U X:2483 , G X:2484 , U X:2485 , U X:2564 , LMA X:2882
BINDING SITE FOR RESIDUE LC2 X 2881
02
AC2
SOFTWARE
ARG P:111 , C X:759 , U X:760 , A X:2041 , A X:2042 , A X:2045 , A X:2482 , G X:2484 , U X:2588 , C X:2589 , U X:2590 , LC2 X:2881
BINDING SITE FOR RESIDUE LMA X 2882
03
AC3
SOFTWARE
A X:1667
BINDING SITE FOR RESIDUE MG X 2883
04
AC4
SOFTWARE
G X:1284
BINDING SITE FOR RESIDUE MG X 2884
05
AC5
SOFTWARE
C X:2554 , G X:2555 , A X:2556
BINDING SITE FOR RESIDUE MG X 2885
06
AC6
SOFTWARE
A X:1281 , C X:1989 , A X:2031
BINDING SITE FOR RESIDUE MG X 2887
07
AC7
SOFTWARE
A X:1282 , A X:1988
BINDING SITE FOR RESIDUE MG X 2888
08
AC8
SOFTWARE
U X:1365
BINDING SITE FOR RESIDUE MG X 2889
09
AC9
SOFTWARE
G X:579 , G X:983 , A X:984
BINDING SITE FOR RESIDUE MG X 2890
10
BC1
SOFTWARE
C X:1310 , C X:2689 , A X:2690 , A X:2692
BINDING SITE FOR RESIDUE MG X 2891
11
BC2
SOFTWARE
A X:2690 , A X:2692 , U X:2693 , G X:2694
BINDING SITE FOR RESIDUE MG X 2892
12
BC3
SOFTWARE
C X:1973
BINDING SITE FOR RESIDUE MG X 2893
13
BC4
SOFTWARE
A X:2045
BINDING SITE FOR RESIDUE MG X 2894
14
BC5
SOFTWARE
G X:2698
BINDING SITE FOR RESIDUE MG X 2895
15
BC6
SOFTWARE
G X:2699
BINDING SITE FOR RESIDUE MG X 2896
16
BC7
SOFTWARE
G X:742 , A X:743 , C X:744 , A X:774 , U X:775 , G X:776
BINDING SITE FOR RESIDUE MG X 2897
17
BC8
SOFTWARE
C X:1340
BINDING SITE FOR RESIDUE MG X 2898
18
BC9
SOFTWARE
G X:2039 , A X:2040
BINDING SITE FOR RESIDUE MG X 2899
19
CC1
SOFTWARE
G X:579 , G X:2426 , A X:2427 , C X:2478
BINDING SITE FOR RESIDUE MG X 2900
20
CC2
SOFTWARE
A X:1980
BINDING SITE FOR RESIDUE MG X 2901
21
CC3
SOFTWARE
U X:1934
BINDING SITE FOR RESIDUE MG X 2902
22
CC4
SOFTWARE
A X:587 , U X:2000
BINDING SITE FOR RESIDUE MG X 2903
23
CC5
SOFTWARE
G X:758
BINDING SITE FOR RESIDUE MG X 2904
24
CC6
SOFTWARE
C X:2431
BINDING SITE FOR RESIDUE MG X 2905
25
CC7
SOFTWARE
G X:1767 , A X:1964
BINDING SITE FOR RESIDUE MG X 2906
26
CC8
SOFTWARE
A X:1693
BINDING SITE FOR RESIDUE MG X 2907
27
CC9
SOFTWARE
G X:2007 , C X:2008 , G X:2018 , G X:2020 , G X:2021
BINDING SITE FOR RESIDUE MG X 2908
28
DC1
SOFTWARE
G X:955 , A X:956 , G X:957
BINDING SITE FOR RESIDUE MG X 2909
29
DC2
SOFTWARE
A X:2246 , A X:2247 , A X:2248 , U X:2249
BINDING SITE FOR RESIDUE MG X 2911
30
DC3
SOFTWARE
THR U:8
BINDING SITE FOR RESIDUE MG U 82
31
DC4
SOFTWARE
GLN P:16 , A X:512
BINDING SITE FOR RESIDUE MG X 2912
32
DC5
SOFTWARE
A X:2497 , A X:2520
BINDING SITE FOR RESIDUE MG X 2913
33
DC6
SOFTWARE
G X:1754
BINDING SITE FOR RESIDUE MG X 2915
34
DC7
SOFTWARE
G X:572
BINDING SITE FOR RESIDUE MG X 2916
35
DC8
SOFTWARE
A X:2512 , A X:2513
BINDING SITE FOR RESIDUE MG X 2917
36
DC9
SOFTWARE
C X:226
BINDING SITE FOR RESIDUE MG X 2918
37
EC1
SOFTWARE
ALA A:226 , A X:796 , A X:797 , A X:2568
BINDING SITE FOR RESIDUE MG X 2919
38
EC2
SOFTWARE
C X:829 , G X:1201
BINDING SITE FOR RESIDUE MG X 2920
39
EC3
SOFTWARE
U X:2572
BINDING SITE FOR RESIDUE MG X 2921
40
EC4
SOFTWARE
ASN C:66 , U X:1999 , U X:2000 , A X:2041
BINDING SITE FOR RESIDUE MG X 2922
41
EC5
SOFTWARE
G X:1000 , A X:1001 , G X:1168 , C X:1169
BINDING SITE FOR RESIDUE MG X 2923
42
EC6
SOFTWARE
G X:1465 , G X:2634
BINDING SITE FOR RESIDUE MG X 2924
43
EC7
SOFTWARE
G X:1371
BINDING SITE FOR RESIDUE MG X 2925
44
EC8
SOFTWARE
A X:576 , U X:823
BINDING SITE FOR RESIDUE MG X 2926
45
EC9
SOFTWARE
G X:761 , A X:762
BINDING SITE FOR RESIDUE MG X 2927
46
FC1
SOFTWARE
A X:2043 , G X:2425 , G X:2481
BINDING SITE FOR RESIDUE MG X 2928
47
FC2
SOFTWARE
G X:2426
BINDING SITE FOR RESIDUE MG X 2929
48
FC3
SOFTWARE
A X:1771 , C X:1773 , A X:1774
BINDING SITE FOR RESIDUE MG X 2930
49
FC4
SOFTWARE
G X:752 , U X:1769
BINDING SITE FOR RESIDUE MG X 2931
50
FC5
SOFTWARE
G X:754
BINDING SITE FOR RESIDUE MG X 2932
51
FC6
SOFTWARE
G X:2561 , G X:2562
BINDING SITE FOR RESIDUE MG X 2933
52
FC7
SOFTWARE
C X:583 , U X:585
BINDING SITE FOR RESIDUE MG X 2934
53
FC8
SOFTWARE
A X:1681 , A X:1682
BINDING SITE FOR RESIDUE MG X 2935
54
FC9
SOFTWARE
U X:800 , A X:801 , A X:802 , C X:803
BINDING SITE FOR RESIDUE MG X 2937
55
GC1
SOFTWARE
C X:583
BINDING SITE FOR RESIDUE MG X 2938
56
GC2
SOFTWARE
G X:798 , G X:805
BINDING SITE FOR RESIDUE MG X 2939
57
GC3
SOFTWARE
PRO A:229 , PRO A:233 , U X:2057 , G X:2218
BINDING SITE FOR RESIDUE MG X 2940
58
GC4
SOFTWARE
G X:1983
BINDING SITE FOR RESIDUE MG X 2941
59
GC5
SOFTWARE
G X:713
BINDING SITE FOR RESIDUE MG X 2942
60
GC6
SOFTWARE
C X:1653
BINDING SITE FOR RESIDUE MG X 2943
61
GC7
SOFTWARE
A X:1751 , C X:2691
BINDING SITE FOR RESIDUE MG X 2944
62
GC8
SOFTWARE
A X:2705 , U X:2706
BINDING SITE FOR RESIDUE MG X 2945
63
GC9
SOFTWARE
G X:2657
BINDING SITE FOR RESIDUE MG X 2946
64
HC1
SOFTWARE
C X:1687 , U X:1688
BINDING SITE FOR RESIDUE MG X 2947
65
HC2
SOFTWARE
G X:687 , A X:815 , A X:817
BINDING SITE FOR RESIDUE MG X 2948
66
HC3
SOFTWARE
C X:185
BINDING SITE FOR RESIDUE MG X 2949
67
HC4
SOFTWARE
A X:1681 , A X:1682 , G X:1683 , G X:1975
BINDING SITE FOR RESIDUE MG X 2950
68
HC5
SOFTWARE
C X:2486 , A X:2551 , C X:2552 , G X:2553 , C X:2554
BINDING SITE FOR RESIDUE MG X 2951
69
HC6
SOFTWARE
SER I:54
BINDING SITE FOR RESIDUE MG I 157
70
HC7
SOFTWARE
G X:2015 , A X:2432
BINDING SITE FOR RESIDUE K X 2954
71
HC8
SOFTWARE
G X:1245
BINDING SITE FOR RESIDUE K X 2955
72
HC9
SOFTWARE
A X:2220
BINDING SITE FOR RESIDUE NA X 2958
73
IC1
SOFTWARE
G X:1985 , G X:1986
BINDING SITE FOR RESIDUE NA X 2959
74
IC2
SOFTWARE
A X:1693 , A X:1694 , U X:1976
BINDING SITE FOR RESIDUE NA X 2960
75
IC3
SOFTWARE
A X:813
BINDING SITE FOR RESIDUE NA X 2961
[
close Site info
]
SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
View:
Select:
Label:
Sorry, no Info available
[
close SNP/Variant info
]
PROSITE Patterns/Profiles
(19, 19)
Info
All PROSITE Patterns/Profiles
01: RIBOSOMAL_L34 (2:2-21)
02: RIBOSOMAL_L36 (4:11-36)
03: RIBOSOMAL_L24 (R:19-36)
04: RIBOSOMAL_L33 (1:22-41)
05: RIBOSOMAL_L27 (T:34-48)
06: RIBOSOMAL_L17 (K:34-56)
07: RIBOSOMAL_L29 (V:39-53)
08: RIBOSOMAL_L20 (N:54-70)
09: RIBOSOMAL_L16_1 (J:60-71)
10: RIBOSOMAL_L14 (H:72-98)
11: RIBOSOMAL_L23 (Q:76-91)
12: RIBOSOMAL_L16_2 (J:83-94)
13: RIBOSOMAL_L19 (M:93-108)
14: RIBOSOMAL_L3 (B:96-119)
15: RIBOSOMAL_L22 (P:104-128)
16: RIBOSOMAL_L15 (I:107-137)
17: RIBOSOMAL_L11 (F:125-136)
18: RIBOSOMAL_L13 (G:131-153)
19: RIBOSOMAL_L2 (A:220-231)
;
View:
Select:
Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
RIBOSOMAL_L34
PS00784
Ribosomal protein L34 signature.
RL34_DEIRA
2-21
1
2:2-21
2
RIBOSOMAL_L36
PS00828
Ribosomal protein L36 signature.
RL36_DEIRA
11-36
1
4:11-36
3
RIBOSOMAL_L24
PS01108
Ribosomal protein L24 signature.
RL24_DEIRA
19-36
1
R:19-36
4
RIBOSOMAL_L33
PS00582
Ribosomal protein L33 signature.
RL33_DEIRA
22-41
1
1:22-41
5
RIBOSOMAL_L27
PS00831
Ribosomal protein L27 signature.
RL27_DEIRA
34-48
1
T:34-48
6
RIBOSOMAL_L17
PS01167
Ribosomal protein L17 signature.
RL17_DEIRA
34-56
1
K:34-56
7
RIBOSOMAL_L29
PS00579
Ribosomal protein L29 signature.
RL29_DEIRA
39-53
1
V:39-53
8
RIBOSOMAL_L20
PS00937
Ribosomal protein L20 signature.
RL20_DEIRA
54-70
1
N:54-70
9
RIBOSOMAL_L16_1
PS00586
Ribosomal protein L16 signature 1.
RL16_DEIRA
59-70
1
J:60-71
10
RIBOSOMAL_L14
PS00049
Ribosomal protein L14 signature.
RL14_DEIRA
72-98
1
H:72-98
11
RIBOSOMAL_L23
PS00050
Ribosomal protein L23 signature.
RL23_DEIRA
76-91
1
Q:76-91
12
RIBOSOMAL_L16_2
PS00701
Ribosomal protein L16 signature 2.
RL16_DEIRA
82-93
1
J:83-94
13
RIBOSOMAL_L19
PS01015
Ribosomal protein L19 signature.
RL19_DEIRA
93-108
1
M:93-108
14
RIBOSOMAL_L3
PS00474
Ribosomal protein L3 signature.
RL3_DEIRA
96-119
1
B:96-119
15
RIBOSOMAL_L22
PS00464
Ribosomal protein L22 signature.
RL22_DEIRA
104-128
1
P:104-128
16
RIBOSOMAL_L15
PS00475
Ribosomal protein L15 signature.
RL15_DEIRA
107-137
1
I:107-137
17
RIBOSOMAL_L11
PS00359
Ribosomal protein L11 signature.
RL11_DEIRA
125-140
1
F:125-136
18
RIBOSOMAL_L13
PS00783
Ribosomal protein L13 signature.
RL13_DEIRA
131-153
1
G:131-153
19
RIBOSOMAL_L2
PS00467
Ribosomal protein L2 signature.
RL2_DEIRA
219-230
1
A:220-231
[
close PROSITE info
]
Exons
(0, 0)
Info
All Exons
View:
Select:
Label:
All Exon Boundaries
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(0, 0)
Info
All SCOP Domains
View:
Select:
Label:
Sorry, no Info available
[
close SCOP info
]
CATH Domains
(0, 0)
Info
all CATH domains
View:
Select:
Label:
Sorry, no Info available
[
close CATH info
]
Pfam Domains
(30, 31)
Info
all PFAM domains
01a: PFAM_KOW_3pipR01 (R:18-49)
02a: PFAM_Ribosomal_L2_C_3pipA01 (A:126-254)
03a: PFAM_Ribosomal_L2_3pipA02 (A:43-120)
04a: PFAM_Ribosomal_L23_3pipQ01 (Q:4-94)
05a: PFAM_Ribosomal_L29_3pipV01 (V:3-60)
06a: PFAM_Ribosomal_L18p_3pipL01 (L:8-111)
07a: PFAM_Ribosomal_L32p_3pipZ01 (Z:5-59)
08a: PFAM_Ribosomal_L11_3pipF01 (F:74-136)
09a: PFAM_Ribosomal_L13_3pipG01 (G:41-168)
10a: PFAM_Ribosomal_L14_3pipH01 (H:1-134)
11a: PFAM_Ribosomal_L16_3pipJ01 (J:6-134)
12a: PFAM_Ribosomal_L17_3pipK01 (K:20-115)
13a: PFAM_Ribosomal_L18e_3pipI01 (I:24-143)
14a: PFAM_Ribosomal_L19_3pipM01 (M:10-109)
15a: PFAM_Ribosomal_L20_3pipN01 (N:2-109)
16a: PFAM_Ribosomal_L21p_3pipO01 (O:5-93)
17a: PFAM_Ribosomal_L22_3pipP01 (P:26-130)
18a: PFAM_Ribosomal_L25p_3pipS01 (S:3-83)
19a: PFAM_Ribosomal_L27_3pipT01 (T:12-82)
20a: PFAM_Ribosomal_L28_3pipU01 (U:8-73)
21a: PFAM_Ribosomal_L30_3pipW01 (W:1-51)
22a: PFAM_Ribosomal_L33_3pip101 (1:7-54)
23a: PFAM_Ribosomal_L34_3pip201 (2:1-44)
24a: PFAM_Ribosomal_L35p_3pip301 (3:6-62)
25a: PFAM_Ribosomal_L36_3pip401 (4:1-37)
26a: PFAM_Ribosomal_L3_3pipB01 (B:8-199)
27a: PFAM_Ribosomal_L4_3pipC01 (C:17-195)
28a: PFAM_Ribosomal_L5_3pipD01 (D:24-80)
29a: PFAM_Ribosomal_L5_C_3pipD02 (D:84-178)
30a: PFAM_Ribosomal_L6_3pipE01 (E:90-165)
30b: PFAM_Ribosomal_L6_3pipE02 (E:90-165)
View:
Select:
Label:
Clans
(
)
(
)
Families
(
)
(
)
Organisms
(
)
(
)
Clan
:
KOW
(56)
Family
:
KOW
(52)
Deinococcus radiodurans
(5)
01a
KOW-3pipR01
R:18-49
Family
:
Ribosomal_L2_C
(45)
Deinococcus radiodurans
(5)
02a
Ribosomal_L2_C-3pipA01
A:126-254
Clan
:
OB
(224)
Family
:
Ribosomal_L2
(45)
Deinococcus radiodurans
(5)
03a
Ribosomal_L2-3pipA02
A:43-120
Clan
:
RRM
(206)
Family
:
Ribosomal_L23
(47)
Deinococcus radiodurans
(5)
04a
Ribosomal_L23-3pipQ01
Q:4-94
Clan
:
Ribo_L29
(45)
Family
:
Ribosomal_L29
(45)
Deinococcus radiodurans
(5)
05a
Ribosomal_L29-3pipV01
V:3-60
Clan
:
S11_L18p
(67)
Family
:
Ribosomal_L18p
(45)
Deinococcus radiodurans
(5)
06a
Ribosomal_L18p-3pipL01
L:8-111
Clan
:
Zn_Beta_Ribbon
(109)
Family
:
Ribosomal_L32p
(5)
Deinococcus radiodurans
(5)
07a
Ribosomal_L32p-3pipZ01
Z:5-59
Clan
:
no clan defined [family: Ribosomal_L11]
(35)
Family
:
Ribosomal_L11
(35)
Deinococcus radiodurans
(5)
08a
Ribosomal_L11-3pipF01
F:74-136
Clan
:
no clan defined [family: Ribosomal_L13]
(44)
Family
:
Ribosomal_L13
(44)
Deinococcus radiodurans
(5)
09a
Ribosomal_L13-3pipG01
G:41-168
Clan
:
no clan defined [family: Ribosomal_L14]
(45)
Family
:
Ribosomal_L14
(45)
Deinococcus radiodurans
(5)
10a
Ribosomal_L14-3pipH01
H:1-134
Clan
:
no clan defined [family: Ribosomal_L16]
(7)
Family
:
Ribosomal_L16
(7)
Deinococcus radiodurans
(6)
11a
Ribosomal_L16-3pipJ01
J:6-134
Clan
:
no clan defined [family: Ribosomal_L17]
(5)
Family
:
Ribosomal_L17
(5)
Deinococcus radiodurans
(5)
12a
Ribosomal_L17-3pipK01
K:20-115
Clan
:
no clan defined [family: Ribosomal_L18e]
(44)
Family
:
Ribosomal_L18e
(44)
Deinococcus radiodurans
(5)
13a
Ribosomal_L18e-3pipI01
I:24-143
Clan
:
no clan defined [family: Ribosomal_L19]
(5)
Family
:
Ribosomal_L19
(5)
Deinococcus radiodurans
(5)
14a
Ribosomal_L19-3pipM01
M:10-109
Clan
:
no clan defined [family: Ribosomal_L20]
(5)
Family
:
Ribosomal_L20
(5)
Deinococcus radiodurans
(5)
15a
Ribosomal_L20-3pipN01
N:2-109
Clan
:
no clan defined [family: Ribosomal_L21p]
(5)
Family
:
Ribosomal_L21p
(5)
Deinococcus radiodurans
(5)
16a
Ribosomal_L21p-3pipO01
O:5-93
Clan
:
no clan defined [family: Ribosomal_L22]
(46)
Family
:
Ribosomal_L22
(46)
Deinococcus radiodurans
(5)
17a
Ribosomal_L22-3pipP01
P:26-130
Clan
:
no clan defined [family: Ribosomal_L25p]
(5)
Family
:
Ribosomal_L25p
(5)
Deinococcus radiodurans
(5)
18a
Ribosomal_L25p-3pipS01
S:3-83
Clan
:
no clan defined [family: Ribosomal_L27]
(7)
Family
:
Ribosomal_L27
(7)
Deinococcus radiodurans
(6)
19a
Ribosomal_L27-3pipT01
T:12-82
Clan
:
no clan defined [family: Ribosomal_L28]
(6)
Family
:
Ribosomal_L28
(6)
Deinococcus radiodurans
(5)
20a
Ribosomal_L28-3pipU01
U:8-73
Clan
:
no clan defined [family: Ribosomal_L30]
(44)
Family
:
Ribosomal_L30
(44)
Deinococcus radiodurans
(5)
21a
Ribosomal_L30-3pipW01
W:1-51
Clan
:
no clan defined [family: Ribosomal_L33]
(2)
Family
:
Ribosomal_L33
(2)
Deinococcus radiodurans
(2)
22a
Ribosomal_L33-3pip101
1:7-54
Clan
:
no clan defined [family: Ribosomal_L34]
(2)
Family
:
Ribosomal_L34
(2)
Deinococcus radiodurans
(2)
23a
Ribosomal_L34-3pip201
2:1-44
Clan
:
no clan defined [family: Ribosomal_L35p]
(2)
Family
:
Ribosomal_L35p
(2)
Deinococcus radiodurans
(2)
24a
Ribosomal_L35p-3pip301
3:6-62
Clan
:
no clan defined [family: Ribosomal_L36]
(5)
Family
:
Ribosomal_L36
(5)
Deinococcus radiodurans
(5)
25a
Ribosomal_L36-3pip401
4:1-37
Clan
:
no clan defined [family: Ribosomal_L3]
(44)
Family
:
Ribosomal_L3
(44)
Deinococcus radiodurans
(5)
26a
Ribosomal_L3-3pipB01
B:8-199
Clan
:
no clan defined [family: Ribosomal_L4]
(46)
Family
:
Ribosomal_L4
(46)
Deinococcus radiodurans
(5)
27a
Ribosomal_L4-3pipC01
C:17-195
Clan
:
no clan defined [family: Ribosomal_L5]
(45)
Family
:
Ribosomal_L5
(45)
Deinococcus radiodurans
(5)
28a
Ribosomal_L5-3pipD01
D:24-80
Clan
:
no clan defined [family: Ribosomal_L5_C]
(46)
Family
:
Ribosomal_L5_C
(46)
Deinococcus radiodurans
(5)
29a
Ribosomal_L5_C-3pipD02
D:84-178
Clan
:
no clan defined [family: Ribosomal_L6]
(45)
Family
:
Ribosomal_L6
(45)
Deinococcus radiodurans
(5)
30a
Ribosomal_L6-3pipE01
E:90-165
30b
Ribosomal_L6-3pipE02
E:90-165
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