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Getting 'Biological Unit' information from database.
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3PDS
Asym. Unit
Info
Asym.Unit (156 KB)
Biol.Unit 1 (151 KB)
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(1)
Title
:
IRREVERSIBLE AGONIST-BETA2 ADRENOCEPTOR COMPLEX
Authors
:
D. M. Rosenbaum, C. Zhang, J. A. Lyons, R. Holl, D. Aragao, D. H. Arlow, S. G. F. Rasmussen, H. -J. Choi, B. T. Devree, R. K. Sunahara, P. S. Chae, S. H. Gellman, R. O. Dror, D. E. Shaw, W. I. Weis, M. Caffrey, P. Gmeiner, B. K. Kobilka
Date
:
24 Oct 10 (Deposition) - 12 Jan 11 (Release) - 09 Feb 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
3.50
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
Gpcr, Signaling, Beta Adrenergic Agonist, Fusion Protein, Membrane Protein-Hydrolase Complex
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
D. M. Rosenbaum, C. Zhang, J. A. Lyons, R. Holl, D. Aragao, D. H. Arlow, S. G. F. Rasmussen, H. J. Choi, B. T. Devree, R. K. Sunahara, P. S. Chae, S. H. Gellman, R. O. Dror, D. E. Shaw, W. I. Weis, M. Caffrey, P. Gmeiner, B. K. Kobilka
Structure And Function Of An Irreversible Agonist-Beta(2) Adrenoceptor Complex
Nature V. 469 236 2011
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Hetero Components
(3, 8)
Info
All Hetero Components
1a: CHOLESTEROL (CLRa)
2a: 8-HYDROXY-5-[(1R)-1-HYDROXY-2-({2-... (ERCa)
3a: SULFATE ION (SO4a)
3b: SULFATE ION (SO4b)
3c: SULFATE ION (SO4c)
3d: SULFATE ION (SO4d)
3e: SULFATE ION (SO4e)
3f: SULFATE ION (SO4f)
View:
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Label:
No.
Name
Count
Type
Full Name
1
CLR
1
Ligand/Ion
CHOLESTEROL
2
ERC
1
Ligand/Ion
8-HYDROXY-5-[(1R)-1-HYDROXY-2-({2-[3-METHOXY-4-(3-SULFANYLPROPOXY)PHENYL]ETHYL}AMINO)ETHYL]QUINOLIN-2(1H)-ONE
3
SO4
6
Ligand/Ion
SULFATE ION
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Sites
(8, 8)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
6: AC6 (SOFTWARE)
7: AC7 (SOFTWARE)
8: AC8 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
GLY A:90 , CYS A:93 , TRP A:99 , TRP A:109 , ASP A:113 , VAL A:114 , CYS A:191 , ASP A:192 , PHE A:193 , ALA A:200 , SER A:203 , SER A:207 , TRP A:286 , PHE A:289 , PHE A:290 , ASN A:293 , TYR A:308 , ILE A:309 , ASN A:312 , TRP A:313 , TYR A:316
BINDING SITE FOR RESIDUE ERC A 1201
2
AC2
SOFTWARE
GLN A:65 , TYR A:70 , THR A:73 , CYS A:77 , ILE A:154 , LEU A:155 , TRP A:158
BINDING SITE FOR RESIDUE CLR A 1202
3
AC3
SOFTWARE
THR A:66 , VAL A:67 , THR A:68 , ARG A:131 , TYR A:141 , SER A:143
BINDING SITE FOR RESIDUE SO4 A 1203
4
AC4
SOFTWARE
PHE A:264 , LYS A:270 , LYS A:273 , ARG A:328
BINDING SITE FOR RESIDUE SO4 A 1204
5
AC5
SOFTWARE
THR A:146 , LYS A:147 , ASN A:1040
BINDING SITE FOR RESIDUE SO4 A 1205
6
AC6
SOFTWARE
PHE A:1114 , THR A:1115 , ASN A:1116 , SER A:1117 , ASN A:1132
BINDING SITE FOR RESIDUE SO4 A 1206
7
AC7
SOFTWARE
THR A:1142 , PRO A:1143 , ASN A:1144 , ARG A:1145
BINDING SITE FOR RESIDUE SO4 A 1207
8
AC8
SOFTWARE
ASP A:1092 , ALA A:1093 , ARG A:1096 , ARG A:1119
BINDING SITE FOR RESIDUE SO4 A 1208
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SAPs(SNPs)/Variants
(5, 5)
Info
(mutated residues are not available)
All SNPs/Variants
1: VAR_003454 (V34M, chain A, )
2: VAR_009125 (I159F, chain A, )
3: VAR_009124 (I159L, chain A, )
4: VAR_003455 (T164I, chain A, )
5: VAR_025101 (S220C, chain A, )
View:
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Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_003454
V
34
M
ADRB2_HUMAN
Polymorphism
---
A
V
34
M
2
UniProt
VAR_009125
I
159
F
ADRB2_HUMAN
Polymorphism
---
A
I
159
F
3
UniProt
VAR_009124
I
159
L
ADRB2_HUMAN
Polymorphism
---
A
I
159
L
4
UniProt
VAR_003455
T
164
I
ADRB2_HUMAN
Polymorphism
1800888
A
T
164
I
5
UniProt
VAR_025101
S
220
C
ADRB2_HUMAN
Polymorphism
3729943
A
S
220
C
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(1, 1)
Info
All PROSITE Patterns/Profiles
1: G_PROTEIN_RECEP_F1_1 (A:119-135)
;
View:
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
G_PROTEIN_RECEP_F1_1
PS00237
G-protein coupled receptors family 1 signature.
ADRB2_HUMAN
119-135
1
A:119-135
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Exons
(0, 0)
Info
All Exons
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(0, 0)
Info
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Sorry, no Info available
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CATH Domains
(0, 0)
Info
all CATH domains
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Sorry, no Info available
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Pfam Domains
(1, 1)
Info
all PFAM domains
1a: PFAM_7tm_1_3pdsA01 (A:50-326)
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Clans
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Organisms
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)
(
)
Clan
:
GPCR_A
(90)
Family
:
7tm_1
(47)
Homo sapiens (Human)
(25)
1a
7tm_1-3pdsA01
A:50-326
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Chain A
Asymmetric Unit 1
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Asym.Unit (156 KB)
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