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3P6A
Asym. Unit
Info
Asym.Unit (245 KB)
Biol.Unit 1 (121 KB)
Biol.Unit 2 (121 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF THE DH/PH DOMAINS OF P115-RHOGEF (R399E MUTANT)
Authors
:
Z. Chen, L. Guo, S. R. Sprang, P. C. Sternweis
Date
:
11 Oct 10 (Deposition) - 05 Jan 11 (Release) - 05 Jan 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.50
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Keywords
:
Regulation Of Rhoa Gtpase, Rhogef, Dh, Ph, Rho, Signaling Protein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
Z. Chen, L. Guo, S. R. Sprang, P. C. Sternweis
Modulation Of A Gef Switch: Autoinhibition Of The Intrinsic Guanine Nucleotide Exchange Activity Of P115-Rhoref
Protein Sci. V. 20 107 2011
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Hetero Components
(0, 0)
Info
All Hetero Components
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Sorry, no Info available
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Sites
(0, 0)
Info
All Sites
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Sorry, no Info available
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
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Sorry, no Info available
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PROSITE Patterns/Profiles
(2, 4)
Info
All PROSITE Patterns/Profiles
1: DH_2 (A:416-605,B:416-605)
2: PH_DOMAIN (A:647-760,B:647-760)
;
View:
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Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
DH_2
PS50010
Dbl homology (DH) domain profile.
ARHG1_HUMAN
416-605
2
A:416-605
B:416-605
2
PH_DOMAIN
PS50003
PH domain profile.
ARHG1_HUMAN
647-760
2
A:647-760
B:647-760
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Exons
(11, 22)
Info
All Exons
Exon 1.15d (A:411-423 | B:411-423)
Exon 1.16 (A:423-472 | B:423-472)
Exon 1.17 (A:472-499 (gaps) | B:472-499 (gaps...)
Exon 1.18 (A:500-541 | B:500-541)
Exon 1.19 (A:542-580 | B:542-580)
Exon 1.20 (A:580-613 | B:580-613)
Exon 1.22 (A:614-639 | B:614-639)
Exon 1.23 (A:640-665 | B:640-665)
Exon 1.24 (A:665-721 (gaps) | B:665-721 (gaps...)
Exon 1.25 (A:721-750 | B:721-750)
Exon 1.26 (A:750-765 | B:750-765)
View:
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All Exon Boundaries
01: Boundary 1.14a/1.15d
02: Boundary 1.15d/1.16
03: Boundary 1.16/1.17
04: Boundary 1.17/1.18
05: Boundary 1.18/1.19
06: Boundary 1.19/1.20
07: Boundary 1.20/1.22
08: Boundary 1.22/1.23
09: Boundary 1.23/1.24
10: Boundary 1.24/1.25
11: Boundary 1.25/1.26
12: Boundary 1.26/1.27
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1b
ENST00000354532
1b
ENSE00001053104
chr19:
42387267-42387356
90
ARHG1_HUMAN
-
0
0
-
-
1.3
ENST00000354532
3
ENSE00002160017
chr19:
42392135-42392177
43
ARHG1_HUMAN
1-8
8
0
-
-
1.4
ENST00000354532
4
ENSE00001796026
chr19:
42392263-42392349
87
ARHG1_HUMAN
9-37
29
0
-
-
1.5
ENST00000354532
5
ENSE00001629400
chr19:
42392823-42392936
114
ARHG1_HUMAN
38-75
38
0
-
-
1.6
ENST00000354532
6
ENSE00001605951
chr19:
42396096-42396194
99
ARHG1_HUMAN
76-108
33
0
-
-
1.7
ENST00000354532
7
ENSE00001614868
chr19:
42396402-42396444
43
ARHG1_HUMAN
109-123
15
0
-
-
1.8
ENST00000354532
8
ENSE00001706685
chr19:
42396674-42396920
247
ARHG1_HUMAN
123-205
83
0
-
-
1.9
ENST00000354532
9
ENSE00001771138
chr19:
42397345-42397374
30
ARHG1_HUMAN
205-215
11
0
-
-
1.10
ENST00000354532
10
ENSE00001613938
chr19:
42398280-42398379
100
ARHG1_HUMAN
215-248
34
0
-
-
1.11
ENST00000354532
11
ENSE00001731644
chr19:
42398524-42398620
97
ARHG1_HUMAN
249-281
33
0
-
-
1.12
ENST00000354532
12
ENSE00001712166
chr19:
42398699-42398734
36
ARHG1_HUMAN
281-293
13
0
-
-
1.13
ENST00000354532
13
ENSE00001682337
chr19:
42399422-42399559
138
ARHG1_HUMAN
293-339
47
0
-
-
1.14a
ENST00000354532
14a
ENSE00000492791
chr19:
42400450-42400555
106
ARHG1_HUMAN
339-374
36
0
-
-
1.15d
ENST00000354532
15d
ENSE00000708622
chr19:
42402591-42402736
146
ARHG1_HUMAN
374-423
50
2
A:411-423
B:411-423
13
13
1.16
ENST00000354532
16
ENSE00000708620
chr19:
42406037-42406183
147
ARHG1_HUMAN
423-472
50
2
A:423-472
B:423-472
50
50
1.17
ENST00000354532
17
ENSE00000708617
chr19:
42406424-42406506
83
ARHG1_HUMAN
472-499
28
2
A:472-499 (gaps)
B:472-499 (gaps)
28
28
1.18
ENST00000354532
18
ENSE00000708615
chr19:
42406683-42406808
126
ARHG1_HUMAN
500-541
42
2
A:500-541
B:500-541
42
42
1.19
ENST00000354532
19
ENSE00000708613
chr19:
42406934-42407048
115
ARHG1_HUMAN
542-580
39
2
A:542-580
B:542-580
39
39
1.20
ENST00000354532
20
ENSE00000708611
chr19:
42407457-42407557
101
ARHG1_HUMAN
580-613
34
2
A:580-613
B:580-613
34
34
1.22
ENST00000354532
22
ENSE00000708609
chr19:
42407859-42407936
78
ARHG1_HUMAN
614-639
26
2
A:614-639
B:614-639
26
26
1.23
ENST00000354532
23
ENSE00000708607
chr19:
42408187-42408262
76
ARHG1_HUMAN
640-665
26
2
A:640-665
B:640-665
26
26
1.24
ENST00000354532
24
ENSE00000708605
chr19:
42408368-42408535
168
ARHG1_HUMAN
665-721
57
2
A:665-721 (gaps)
B:665-721 (gaps)
57
57
1.25
ENST00000354532
25
ENSE00000708603
chr19:
42409101-42409188
88
ARHG1_HUMAN
721-750
30
2
A:721-750
B:721-750
30
30
1.26
ENST00000354532
26
ENSE00000708602
chr19:
42409327-42409413
87
ARHG1_HUMAN
750-779
30
2
A:750-765
B:750-765
16
16
1.27
ENST00000354532
27
ENSE00000708601
chr19:
42409912-42409979
68
ARHG1_HUMAN
779-802
24
0
-
-
1.28
ENST00000354532
28
ENSE00000708600
chr19:
42410091-42410177
87
ARHG1_HUMAN
802-831
30
0
-
-
1.29
ENST00000354532
29
ENSE00000708599
chr19:
42410609-42410772
164
ARHG1_HUMAN
831-885
55
0
-
-
1.30
ENST00000354532
30
ENSE00001660749
chr19:
42410855-42410955
101
ARHG1_HUMAN
886-912
27
0
-
-
1.31
ENST00000354532
31
ENSE00001691041
chr19:
42411257-42411597
341
ARHG1_HUMAN
-
0
0
-
-
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SCOP Domains
(2, 4)
Info
All SCOP Domains
1a: SCOP_d3p6aa1 (A:411-623)
1b: SCOP_d3p6ab1 (B:411-623)
2a: SCOP_d3p6aa2 (A:624-765)
2b: SCOP_d3p6ab2 (B:624-765)
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Class
:
All alpha proteins
(14657)
Fold
:
DBL homology domain (DH-domain)
(22)
Superfamily
:
DBL homology domain (DH-domain)
(22)
Family
:
automated matches
(3)
Protein domain
:
automated matches
(3)
Human (Homo sapiens) [TaxId: 9606]
(2)
1a
d3p6aa1
A:411-623
1b
d3p6ab1
B:411-623
Class
:
All beta proteins
(24004)
Fold
:
PH domain-like barrel
(258)
Superfamily
:
PH domain-like
(257)
Family
:
automated matches
(50)
Protein domain
:
automated matches
(50)
Human (Homo sapiens) [TaxId: 9606]
(30)
2a
d3p6aa2
A:624-765
2b
d3p6ab2
B:624-765
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CATH Domains
(0, 0)
Info
all CATH domains
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Pfam Domains
(1, 2)
Info
all PFAM domains
1a: PFAM_RhoGEF_3p6aB01 (B:420-604)
1b: PFAM_RhoGEF_3p6aB02 (B:420-604)
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(
)
Clan
:
no clan defined [family: RhoGEF]
(22)
Family
:
RhoGEF
(22)
Homo sapiens (Human)
(16)
1a
RhoGEF-3p6aB01
B:420-604
1b
RhoGEF-3p6aB02
B:420-604
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