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3P4E
Asym. Unit
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Asym.Unit (124 KB)
Biol.Unit 1 (236 KB)
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(1)
Title
:
PHOSPHORIBOSYLFORMYLGLYCINAMIDINE CYCLO-LIGASE FROM VIBRIO CHOLERAE
Authors
:
J. Osipiuk, M. Zhou, L. Papazisi, W. F. Anderson, A. Joachimiak, Center Structural Genomics Of Infectious Diseases (Csgid)
Date
:
06 Oct 10 (Deposition) - 20 Oct 10 (Release) - 20 Oct 10 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.77
Chains
:
Asym. Unit : A
Biol. Unit 1: A (2x)
Keywords
:
Structural Genomics, Center For Structural Genomics Of Infectious Diseases, Csgid, Phosphoribosylaminoimidazole Synthetase, Purm, Amp, Ligase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
J. Osipiuk, M. Zhou, L. Papazisi, W. F. Anderson, A. Joachimiak
Phosphoribosylformylglycinamidine Cyclo-Ligase From Vibrio Cholerae.
To Be Published
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Hetero Components
(4, 4)
Info
All Hetero Components
1a: ADENOSINE MONOPHOSPHATE (AMPa)
2a: CITRIC ACID (CITa)
3a: 1,2-ETHANEDIOL (EDOa)
4a: GLYCEROL (GOLa)
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No.
Name
Count
Type
Full Name
1
AMP
1
Ligand/Ion
ADENOSINE MONOPHOSPHATE
2
CIT
1
Ligand/Ion
CITRIC ACID
3
EDO
1
Ligand/Ion
1,2-ETHANEDIOL
4
GOL
1
Ligand/Ion
GLYCEROL
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Sites
(4, 4)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
VAL A:24 , ASP A:108 , ILE A:124 , GLY A:140 , GLY A:141 , GLU A:142 , THR A:143 , HOH A:523 , HOH A:606 , HOH A:607 , HOH A:608 , HOH A:609 , HOH A:610
BINDING SITE FOR RESIDUE AMP A 501
2
AC2
SOFTWARE
LYS A:80 , ASP A:82 , LEU A:213 , TRP A:282 , GLU A:285 , HOH A:432 , HOH A:497 , HOH A:624
BINDING SITE FOR RESIDUE GOL A 502
3
AC3
SOFTWARE
ASN A:193 , GLY A:194 , TYR A:195 , SER A:196 , LEU A:197 , GLY A:250 , HOH A:360 , HOH A:535 , HOH A:536 , HOH A:599 , HOH A:600
BINDING SITE FOR RESIDUE CIT A 503
4
AC4
SOFTWARE
VAL A:98 , ILE A:171 , ALA A:244 , ILE A:245
BINDING SITE FOR RESIDUE EDO A 504
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are not available)
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PROSITE Patterns/Profiles
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Exons
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(2, 2)
Info
All SCOP Domains
1a: SCOP_d3p4ea1 (A:18-171)
2a: SCOP_d3p4ea2 (A:172-346)
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Protein Domains
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Organisms
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(
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Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
Bacillus chorismate mutase-like
(324)
Superfamily
:
PurM N-terminal domain-like
(31)
Family
:
PurM N-terminal domain-like
(25)
Protein domain
:
automated matches
(1)
Vibrio cholerae [TaxId: 666]
(1)
1a
d3p4ea1
A:18-171
Fold
:
PurM C-terminal domain-like
(31)
Superfamily
:
PurM C-terminal domain-like
(31)
Family
:
automated matches
(7)
Protein domain
:
automated matches
(7)
Vibrio cholerae [TaxId: 666]
(1)
2a
d3p4ea2
A:172-346
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CATH Domains
(0, 0)
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all CATH domains
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Pfam Domains
(2, 2)
Info
all PFAM domains
1a: PFAM_AIRS_3p4eA01 (A:28-143)
2a: PFAM_AIRS_C_3p4eA02 (A:177-344)
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Clans
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)
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Clan
:
no clan defined [family: AIRS]
(11)
Family
:
AIRS
(11)
Vibrio cholerae
(1)
1a
AIRS-3p4eA01
A:28-143
Clan
:
no clan defined [family: AIRS_C]
(13)
Family
:
AIRS_C
(13)
Vibrio cholerae
(1)
2a
AIRS_C-3p4eA02
A:177-344
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