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3P23
Asym. Unit
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Asym.Unit (540 KB)
Biol.Unit 1 (268 KB)
Biol.Unit 2 (269 KB)
Biol.Unit 3 (137 KB)
Biol.Unit 4 (136 KB)
Biol.Unit 5 (139 KB)
Biol.Unit 6 (136 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF THE HUMAN KINASE AND RNASE DOMAINS IN COMPLEX WITH ADP
Authors
:
M. M. U. Ali, L. H. Pearl
Date
:
01 Oct 10 (Deposition) - 23 Feb 11 (Release) - 21 Aug 13 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.70
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A,B (1x)
Biol. Unit 2: C,D (1x)
Biol. Unit 3: A (1x)
Biol. Unit 4: B (1x)
Biol. Unit 5: C (1x)
Biol. Unit 6: D (1x)
Keywords
:
Kinase Domain, Kinase And Rnase Function, Atp Binding Ssrna Binding, Dephosphorylated, Hydrolase, Transferase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
M. M. Ali, T. Bagratuni, E. L. Davenport, P. R. Nowak, M. C. Silva-Santisteban, A. Hardcastle, C. Mcandrews, M. G. Rowlands G. J. Morgan, W. Aherne, I. Collins, F. E. Davies, L. H. Pearl
Structure Of The Ire1 Autophosphorylation Complex And Implications For The Unfolded Protein Response.
Embo J. V. 30 894 2011
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Hetero Components
(3, 9)
Info
All Hetero Components
1a: ADENOSINE-5'-DIPHOSPHATE (ADPa)
1b: ADENOSINE-5'-DIPHOSPHATE (ADPb)
1c: ADENOSINE-5'-DIPHOSPHATE (ADPc)
1d: ADENOSINE-5'-DIPHOSPHATE (ADPd)
2a: MAGNESIUM ION (MGa)
2b: MAGNESIUM ION (MGb)
2c: MAGNESIUM ION (MGc)
2d: MAGNESIUM ION (MGd)
3a: SULFATE ION (SO4a)
View:
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Label:
No.
Name
Count
Type
Full Name
1
ADP
4
Ligand/Ion
ADENOSINE-5'-DIPHOSPHATE
2
MG
4
Ligand/Ion
MAGNESIUM ION
3
SO4
1
Ligand/Ion
SULFATE ION
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Sites
(9, 9)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
6: AC6 (SOFTWARE)
7: AC7 (SOFTWARE)
8: AC8 (SOFTWARE)
9: AC9 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
HIS A:692 , ASN A:693 , ASP A:711 , ADP A:1002
BINDING SITE FOR RESIDUE MG A 1001
2
AC2
SOFTWARE
HOH A:19 , HIS A:579 , GLY A:580 , THR A:584 , ALA A:597 , LYS A:599 , ILE A:642 , GLU A:643 , CYS A:645 , THR A:648 , LYS A:690 , HIS A:692 , ASN A:693 , ASP A:711 , MG A:1001
BINDING SITE FOR RESIDUE ADP A 1002
3
AC3
SOFTWARE
ARG A:627 , ARG C:627
BINDING SITE FOR RESIDUE SO4 A 1003
4
AC4
SOFTWARE
HIS B:692 , ASN B:693 , ASP B:711 , ADP B:1002
BINDING SITE FOR RESIDUE MG B 1001
5
AC5
SOFTWARE
HOH B:48 , HOH B:82 , HOH B:89 , GLY B:580 , THR B:584 , LYS B:599 , ILE B:642 , GLU B:643 , CYS B:645 , THR B:648 , LYS B:690 , HIS B:692 , ASN B:693 , LEU B:695 , ASP B:711 , MG B:1001
BINDING SITE FOR RESIDUE ADP B 1002
6
AC6
SOFTWARE
HIS C:692 , ASN C:693 , ASP C:711 , ADP C:1002
BINDING SITE FOR RESIDUE MG C 1001
7
AC7
SOFTWARE
HOH C:22 , HOH C:64 , LEU C:577 , HIS C:579 , GLY C:580 , THR C:584 , VAL C:586 , ALA C:597 , LYS C:599 , ILE C:642 , GLU C:643 , CYS C:645 , THR C:648 , LYS C:690 , ASN C:693 , LEU C:695 , ASP C:711 , MG C:1001
BINDING SITE FOR RESIDUE ADP C 1002
8
AC8
SOFTWARE
HIS D:692 , ASN D:693 , ASP D:711 , ADP D:1002
BINDING SITE FOR RESIDUE MG D 1001
9
AC9
SOFTWARE
HOH D:43 , HOH D:94 , LEU D:577 , GLY D:578 , GLY D:580 , THR D:584 , LYS D:599 , ILE D:642 , GLU D:643 , CYS D:645 , LYS D:690 , ASN D:693 , LEU D:695 , ASP D:711 , MG D:1001
BINDING SITE FOR RESIDUE ADP D 1002
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SAPs(SNPs)/Variants
(4, 16)
Info
(mutated residues are not available)
All SNPs/Variants
1: VAR_040491 (R635W, chain A/B/C/D, )
2: VAR_040492 (N700S, chain A/B/C/D, )
3: VAR_040493 (S769F, chain A/B/C/D, )
4: VAR_040494 (P830L, chain A/B/C/D, )
View:
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Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_040491
R
635
W
ERN1_HUMAN
Unclassified
---
A/B/C/D
R
635
W
2
UniProt
VAR_040492
N
700
S
ERN1_HUMAN
Polymorphism
---
A/B/C/D
N
700
S
3
UniProt
VAR_040493
S
769
F
ERN1_HUMAN
Unclassified
---
A/B/C/D
S
769
F
4
UniProt
VAR_040494
P
830
L
ERN1_HUMAN
Unclassified
---
A/B/C/D
P
830
L
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(2, 8)
Info
All PROSITE Patterns/Profiles
1: PROTEIN_KINASE_ST (A:684-696,B:684-696,C:684-696,D:68...)
2: KEN (A:835-963,B:835-963,C:835-963,D:83...)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
PROTEIN_KINASE_ST
PS00108
Serine/Threonine protein kinases active-site signature.
ERN1_HUMAN
684-696
4
A:684-696
B:684-696
C:684-696
D:684-696
2
KEN
PS51392
KEN domain profile.
ERN1_HUMAN
835-963
4
A:835-963
B:835-963
C:835-963
D:835-963
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Exons
(0, 0)
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SCOP Domains
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CATH Domains
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Pfam Domains
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Asymmetric Unit 1
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Asym.Unit (540 KB)
Header - Asym.Unit
Biol.Unit 1 (268 KB)
Header - Biol.Unit 1
Biol.Unit 2 (269 KB)
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Biol.Unit 3 (137 KB)
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Biol.Unit 4 (136 KB)
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