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Getting 'Biological Unit' information from database.
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Getting 'Exon' information from database.
3P11
Asym. Unit
Info
Asym.Unit (322 KB)
Biol.Unit 1 (314 KB)
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(1)
Title
:
ANTI-EGFR/HER3 FAB DL11 IN COMPLEX WITH DOMAINS I-III OF THE HER3 EXTRACELLULAR REGION
Authors
:
C. Eigenbrot, S. Shia
Date
:
29 Sep 10 (Deposition) - 26 Oct 11 (Release) - 21 Mar 12 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
3.70
Chains
:
Asym. Unit : A,H,L
Biol. Unit 1: A,H,L (1x)
Keywords
:
Beta-Sandwich, Antigens Her3, Immune System
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
G. Schaefer, L. Haber, L. M. Crocker, S. Shia, L. Shao, D. Dowbenko, K. Totpal, A. Wong, C. V. Lee, S. Stawicki, R. Clark, C. Fields, G. D. Lewis Phillips, R. A. Prell, D. M. Danilenko, Y. Franke, J. P. Stephan, J. Hwang, Y. Wu, J. Bostrom, M. X. Sliwkowski, G. Fuh, C. Eigenbrot
A Two-In-One Antibody Against Her3 And Egfr Has Superior Inhibitory Activity Compared With Monospecific Antibodies.
Cancer Cell V. 20 472 2011
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Hetero Components
(1, 4)
Info
All Hetero Components
1a: N-ACETYL-D-GLUCOSAMINE (NAGa)
1b: N-ACETYL-D-GLUCOSAMINE (NAGb)
1c: N-ACETYL-D-GLUCOSAMINE (NAGc)
1d: N-ACETYL-D-GLUCOSAMINE (NAGd)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
NAG
4
Ligand/Ion
N-ACETYL-D-GLUCOSAMINE
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]
Sites
(4, 4)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
ASN A:334 , THR A:370
BINDING SITE FOR RESIDUE NAG A 623
2
AC2
SOFTWARE
HIS A:386 , MET A:387 , HIS A:388 , ASN A:389 , SER A:421 , GLN A:497 , NAG A:625
BINDING SITE FOR RESIDUE NAG A 624
3
AC3
SOFTWARE
NAG A:624
BINDING SITE FOR RESIDUE NAG A 625
4
AC4
SOFTWARE
PRO A:385 , ASN A:418 , GLN A:442
BINDING SITE FOR RESIDUE NAG A 627
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SAPs(SNPs)/Variants
(4, 4)
Info
(mutated residues are not available)
All SNPs/Variants
1: VAR_042102 (P11L, chain A, )
2: VAR_042103 (V85M, chain A, )
3: VAR_042104 (T185I, chain A, )
4: VAR_049710 (N366S, chain A, )
View:
Select:
Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_042102
P
30
L
ERBB3_HUMAN
Polymorphism
56017157
A
P
11
L
2
UniProt
VAR_042103
V
104
M
ERBB3_HUMAN
Unclassified
---
A
V
85
M
3
UniProt
VAR_042104
T
204
I
ERBB3_HUMAN
Polymorphism
56107455
A
T
185
I
4
UniProt
VAR_049710
N
385
S
ERBB3_HUMAN
Polymorphism
12320176
A
N
366
S
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(0, 0)
Info
All PROSITE Patterns/Profiles
;
View:
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Label:
End label:
Sorry, no Info available
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Exons
(13, 13)
Info
All Exons
Exon 1.1a (A:8-9)
Exon 1.2 (A:9-59)
Exon 1.3a (A:60-122)
Exon 1.4 (A:122-164)
Exon 1.5 (A:164-186)
Exon 1.6 (A:186-225)
Exon 1.7 (A:226-273)
Exon 1.8 (A:273-311)
Exon 1.9a (A:311-351)
Exon 1.11 (A:351-376)
Exon 1.12 (A:376-406)
Exon 1.13a (A:406-475)
Exon 1.14a (A:475-513)
View:
Select:
Label:
All Exon Boundaries
01: Boundary -/1.1a
02: Boundary 1.1a/1.2
03: Boundary 1.2/1.3a
04: Boundary 1.3a/1.4
05: Boundary 1.4/1.5
06: Boundary 1.5/1.6
07: Boundary 1.6/1.7
08: Boundary 1.7/1.8
09: Boundary 1.8/1.9a
10: Boundary 1.9a/1.11
11: Boundary 1.11/1.12
12: Boundary 1.12/1.13a
13: Boundary 1.13a/1.14a
14: Boundary 1.14a/1.15
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1a
ENST00000267101
1a
ENSE00001182862
chr12:
56473892-56474166
275
ERBB3_HUMAN
1-28
28
1
A:8-9
2
1.2
ENST00000267101
2
ENSE00001670328
chr12:
56477535-56477686
152
ERBB3_HUMAN
28-78
51
1
A:9-59
51
1.3a
ENST00000267101
3a
ENSE00001691214
chr12:
56478779-56478965
187
ERBB3_HUMAN
79-141
63
1
A:60-122
63
1.4
ENST00000267101
4
ENSE00001607896
chr12:
56480315-56480440
126
ERBB3_HUMAN
141-183
43
1
A:122-164
43
1.5
ENST00000267101
5
ENSE00001713759
chr12:
56481361-56481426
66
ERBB3_HUMAN
183-205
23
1
A:164-186
23
1.6
ENST00000267101
6
ENSE00001696674
chr12:
56481579-56481697
119
ERBB3_HUMAN
205-244
40
1
A:186-225
40
1.7
ENST00000267101
7
ENSE00001784438
chr12:
56481805-56481946
142
ERBB3_HUMAN
245-292
48
1
A:226-273
48
1.8
ENST00000267101
8
ENSE00001624919
chr12:
56482327-56482440
114
ERBB3_HUMAN
292-330
39
1
A:273-311
39
1.9a
ENST00000267101
9a
ENSE00000838658
chr12:
56482532-56482652
121
ERBB3_HUMAN
330-370
41
1
A:311-351
41
1.11
ENST00000267101
11
ENSE00001059664
chr12:
56486531-56486604
74
ERBB3_HUMAN
370-395
26
1
A:351-376
26
1.12
ENST00000267101
12
ENSE00001143935
chr12:
56486770-56486860
91
ERBB3_HUMAN
395-425
31
1
A:376-406
31
1.13a
ENST00000267101
13a
ENSE00001143926
chr12:
56487129-56487334
206
ERBB3_HUMAN
425-494
70
1
A:406-475
70
1.14a
ENST00000267101
14a
ENSE00001143915
chr12:
56487548-56487680
133
ERBB3_HUMAN
494-538
45
1
A:475-513
39
1.15
ENST00000267101
15
ENSE00001143907
chr12:
56487883-56487973
91
ERBB3_HUMAN
538-568
31
0
-
-
1.16
ENST00000267101
16
ENSE00001143899
chr12:
56488186-56488340
155
ERBB3_HUMAN
569-620
52
0
-
-
1.17
ENST00000267101
17
ENSE00001059678
chr12:
56489041-56489094
54
ERBB3_HUMAN
620-638
19
0
-
-
1.18
ENST00000267101
18
ENSE00001143884
chr12:
56489449-56489590
142
ERBB3_HUMAN
638-685
48
0
-
-
1.19
ENST00000267101
19
ENSE00001143876
chr12:
56490287-56490406
120
ERBB3_HUMAN
686-725
40
0
-
-
1.20
ENST00000267101
20
ENSE00001143869
chr12:
56490532-56490630
99
ERBB3_HUMAN
726-758
33
0
-
-
1.21
ENST00000267101
21
ENSE00001143859
chr12:
56490829-56491014
186
ERBB3_HUMAN
759-820
62
0
-
-
1.22
ENST00000267101
22
ENSE00001143850
chr12:
56491569-56491724
156
ERBB3_HUMAN
821-872
52
0
-
-
1.23
ENST00000267101
23
ENSE00001143842
chr12:
56492284-56492359
76
ERBB3_HUMAN
873-898
26
0
-
-
1.24b
ENST00000267101
24b
ENSE00001143833
chr12:
56492543-56492689
147
ERBB3_HUMAN
898-947
50
0
-
-
1.25
ENST00000267101
25
ENSE00001143824
chr12:
56493432-56493529
98
ERBB3_HUMAN
947-979
33
0
-
-
1.26
ENST00000267101
26
ENSE00001143816
chr12:
56493622-56493813
192
ERBB3_HUMAN
980-1043
64
0
-
-
1.27
ENST00000267101
27
ENSE00001143808
chr12:
56493958-56494029
72
ERBB3_HUMAN
1044-1067
24
0
-
-
1.28
ENST00000267101
28
ENSE00001143800
chr12:
56494845-56495145
301
ERBB3_HUMAN
1068-1168
101
0
-
-
1.29
ENST00000267101
29
ENSE00001324564
chr12:
56495313-56497128
1816
ERBB3_HUMAN
1168-1342
175
0
-
-
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SCOP Domains
(0, 0)
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CATH Domains
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all CATH domains
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Sorry, no Info available
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Pfam Domains
(0, 0)
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all PFAM domains
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Sorry, no Info available
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