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Asym. Unit
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Asym.Unit (150 KB)
Biol.Unit 1 (144 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF ENOLASE SUPERFAMILY MEMBER FROM BORDETELLA BRONCHISEPTICA COMPLEXED WITH MG AND M-XYLARATE
Authors
:
A. A. Fedorov, E. V. Fedorov, D. Wichelecki, J. A. Gerlt, S. C. Almo
Date
:
27 Sep 10 (Deposition) - 28 Sep 11 (Release) - 28 Sep 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.30
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (1x)
Keywords
:
Beta-Alpha Barrel, Enolase Superfamily Member, M-Xylarate, Unknown Function
(Keyword Search:
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)
Reference
:
A. A. Fedorov, E. V. Fedorov, D. Wichelecki, J. A. Gerlt, S. C. Almo
Crystal Structure Of Enolase Superfamily Member From Bordetella Bronchiseptica Complexed With Mg And M-Xylarate
To Be Published
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Hetero Components
(4, 15)
Info
All Hetero Components
1a: ACETIC ACID (ACYa)
1b: ACETIC ACID (ACYb)
1c: ACETIC ACID (ACYc)
1d: ACETIC ACID (ACYd)
1e: ACETIC ACID (ACYe)
1f: ACETIC ACID (ACYf)
2a: D-XYLARIC ACID (DXLa)
3a: GLYCEROL (GOLa)
3b: GLYCEROL (GOLb)
3c: GLYCEROL (GOLc)
3d: GLYCEROL (GOLd)
4a: MAGNESIUM ION (MGa)
4b: MAGNESIUM ION (MGb)
4c: MAGNESIUM ION (MGc)
4d: MAGNESIUM ION (MGd)
View:
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Label:
No.
Name
Count
Type
Full Name
1
ACY
6
Ligand/Ion
ACETIC ACID
2
DXL
1
Ligand/Ion
D-XYLARIC ACID
3
GOL
4
Ligand/Ion
GLYCEROL
4
MG
4
Ligand/Ion
MAGNESIUM ION
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Sites
(15, 15)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
View:
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No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
ASP A:201 , GLU A:227 , GLU A:254 , HOH A:972 , HOH A:1031 , HOH A:1032
BINDING SITE FOR RESIDUE MG A 390
02
AC2
SOFTWARE
ASP B:201 , GLU B:227 , GLU B:254 , DXL B:392 , HOH B:971
BINDING SITE FOR RESIDUE MG B 390
03
AC3
SOFTWARE
HIS A:86 , HIS A:90 , HOH A:1024 , HOH B:978
BINDING SITE FOR RESIDUE MG A 391
04
AC4
SOFTWARE
HOH A:976 , HIS B:86 , HIS B:90 , HOH B:734
BINDING SITE FOR RESIDUE MG B 391
05
AC5
SOFTWARE
SER B:25 , LYS B:30 , TYR B:147 , LYS B:171 , LYS B:173 , ASP B:201 , ASN B:203 , GLU B:227 , GLU B:254 , HIS B:304 , PHE B:306 , GLU B:329 , MG B:390 , HOH B:531 , HOH B:971
BINDING SITE FOR RESIDUE DXL B 392
06
AC6
SOFTWARE
HIS A:99 , ARG A:100 , ASP A:264 , HOH A:405 , ARG B:100 , LEU B:256 , ALA B:261 , ASP B:264 , HOH B:498 , HOH B:588
BINDING SITE FOR RESIDUE GOL B 393
07
AC7
SOFTWARE
ARG A:63 , GLU A:92 , ASP B:57 , GLU B:378 , PRO B:379 , HOH B:521 , HOH B:525 , HOH B:615 , HOH B:623 , HOH B:763
BINDING SITE FOR RESIDUE GOL B 394
08
AC8
SOFTWARE
ASP A:57 , GLU A:378 , HOH A:508 , HOH A:525 , HOH A:559 , HOH A:605 , ARG B:63 , ASP B:67 , GLU B:92 , HOH B:508
BINDING SITE FOR RESIDUE GOL A 392
09
AC9
SOFTWARE
GLU A:197 , GLY A:222 , CYS A:223 , PRO A:247 , ARG A:249 , HOH A:484 , HOH A:611 , HOH A:675
BINDING SITE FOR RESIDUE GOL A 393
10
BC1
SOFTWARE
HOH A:741 , ARG B:22 , HOH B:571 , HOH B:820 , HOH B:868
BINDING SITE FOR RESIDUE ACY B 395
11
BC2
SOFTWARE
GLY B:207 , ARG B:208 , HIS B:298 , HOH B:483 , HOH B:487 , HOH B:540 , HOH B:850
BINDING SITE FOR RESIDUE ACY B 396
12
BC3
SOFTWARE
ASP B:149 , ARG B:176 , ASP B:181 , HOH B:538 , HOH B:634
BINDING SITE FOR RESIDUE ACY B 397
13
BC4
SOFTWARE
GLY A:207 , ARG A:208 , HIS A:298 , HOH A:496 , HOH A:500 , HOH A:542 , HOH A:807 , HOH A:996
BINDING SITE FOR RESIDUE ACY A 394
14
BC5
SOFTWARE
ASP A:149 , ARG A:176 , ASP A:181 , HOH A:447 , HOH A:581
BINDING SITE FOR RESIDUE ACY A 395
15
BC6
SOFTWARE
SER A:25 , ALA A:27 , LYS A:30 , TYR A:147 , LYS A:173 , ASN A:203 , HOH A:1035
BINDING SITE FOR RESIDUE ACY A 396
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
(0, 0)
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Exons
(0, 0)
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(2, 4)
Info
All SCOP Domains
1a: SCOP_d3ozya1 (A:2-132)
1b: SCOP_d3ozyb1 (B:2-132)
2a: SCOP_d3ozya2 (A:133-387)
2b: SCOP_d3ozyb2 (B:133-387)
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Classes
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Protein Domains
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Organisms
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Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
Enolase N-terminal domain-like
(211)
Superfamily
:
Enolase N-terminal domain-like
(211)
Family
:
automated matches
(123)
Protein domain
:
automated matches
(123)
Bordetella bronchiseptica [TaxId: 518]
(3)
1a
d3ozya1
A:2-132
1b
d3ozyb1
B:2-132
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
TIM beta/alpha-barrel
(3956)
Superfamily
:
Enolase C-terminal domain-like
(212)
Family
:
automated matches
(102)
Protein domain
:
automated matches
(102)
Bordetella bronchiseptica [TaxId: 518]
(3)
2a
d3ozya2
A:133-387
2b
d3ozyb2
B:133-387
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CATH Domains
(0, 0)
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all CATH domains
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Pfam Domains
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Asymmetric Unit 1
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Asym.Unit (150 KB)
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Header - Biol.Unit 1
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