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3OZG
Biol. Unit 1
Info
Asym.Unit (162 KB)
Biol.Unit 1 (157 KB)
Biol.Unit 2 (154 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF PLASMODIUM FALCIPARUM HYPOXANTHINE-GUANINE-XANTHINE PHOSPHORIBOSYLTRANSFERASE IN COMPLEX WITH S-SERME-IMMH PHOSPHONATE
Authors
:
M. Ho, K. Z. Hazleton, S. C. Almo, V. L. Schramm
Date
:
24 Sep 10 (Deposition) - 28 Sep 11 (Release) - 11 Jul 12 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.99
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A,B (2x)
Biol. Unit 2: C,D (2x)
Keywords
:
Hypoxanthine, Transferase-Transferase Inhibitor Complex
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
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Reference
:
K. Z. Hazleton, M. C. Ho, M. B. Cassera, K. Clinch, D. R. Crump, I. Rosario, E. F. Merino, S. C. Almo, P. C. Tyler, V. L. Schramm
Acyclic Immucillin Phosphonates: Second-Generation Inhibitors Of Plasmodium Falciparum Hypoxanthine- Guanine-Xanthine Phosphoribosyltransferase.
Chem. Biol. V. 19 721 2012
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Hetero Components
(2, 8)
Info
All Hetero Components
1a: MAGNESIUM ION (MGa)
1b: MAGNESIUM ION (MGb)
1c: MAGNESIUM ION (MGc)
1d: MAGNESIUM ION (MGd)
2a: PYROPHOSPHATE 2- (POPa)
2b: PYROPHOSPHATE 2- (POPb)
2c: PYROPHOSPHATE 2- (POPc)
2d: PYROPHOSPHATE 2- (POPd)
3a: [(3S)-4-HYDROXY-3-{[(4-OXO-4,5-DIH... (SSIa)
3b: [(3S)-4-HYDROXY-3-{[(4-OXO-4,5-DIH... (SSIb)
3c: [(3S)-4-HYDROXY-3-{[(4-OXO-4,5-DIH... (SSIc)
3d: [(3S)-4-HYDROXY-3-{[(4-OXO-4,5-DIH... (SSId)
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No.
Name
Count
Type
Full Name
1
MG
-1
Ligand/Ion
MAGNESIUM ION
2
POP
4
Ligand/Ion
PYROPHOSPHATE 2-
3
SSI
4
Ligand/Ion
[(3S)-4-HYDROXY-3-{[(4-OXO-4,5-DIHYDRO-3H-PYRROLO[3,2-D]PYRIMIDIN-7-YL)METHYL]AMINO}BUTYL]PHOSPHONIC ACID
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Sites
(6, 6)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
6: AC6 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
TYR A:116 , GLU A:144 , ASP A:145 , ILE A:146 , ASP A:148 , THR A:149 , GLY A:150 , LYS A:151 , THR A:152 , LYS A:176 , PHE A:197 , VAL A:198 , ASP A:204 , POP A:233 , HOH A:237 , HOH A:250 , HOH A:269 , HOH A:291
BINDING SITE FOR RESIDUE SSI A 232
2
AC2
SOFTWARE
LYS A:77 , GLY A:78 , ARG A:112 , VAL A:113 , LYS A:114 , SER A:115 , TYR A:116 , ASP A:204 , ARG A:210 , SSI A:232 , MG A:234 , HOH A:252 , HOH A:289 , HOH A:290 , HOH A:291 , HOH A:292
BINDING SITE FOR RESIDUE POP A 233
3
AC3
SOFTWARE
ASP A:204 , POP A:233 , HOH A:269 , HOH A:289 , HOH A:290
BINDING SITE FOR RESIDUE MG A 234
4
AC4
SOFTWARE
ASP B:204 , POP B:234 , HOH B:256 , HOH B:283 , HOH B:284
BINDING SITE FOR RESIDUE MG B 232
5
AC5
SOFTWARE
TYR B:116 , GLU B:144 , ASP B:145 , ILE B:146 , ASP B:148 , THR B:149 , GLY B:150 , LYS B:151 , THR B:152 , LYS B:176 , PHE B:197 , VAL B:198 , ASP B:204 , POP B:234 , HOH B:256 , HOH B:266 , HOH B:280 , HOH B:285
BINDING SITE FOR RESIDUE SSI B 233
6
AC6
SOFTWARE
LYS B:77 , GLY B:78 , ARG B:112 , VAL B:113 , LYS B:114 , SER B:115 , TYR B:116 , ASP B:204 , ARG B:210 , MG B:232 , SSI B:233 , HOH B:279 , HOH B:283 , HOH B:285 , HOH B:286
BINDING SITE FOR RESIDUE POP B 234
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are only available for the asymmetric unit)
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PROSITE Patterns/Profiles
(1, 4)
Info
All PROSITE Patterns/Profiles
1: PUR_PYR_PR_TRANSFER (A:140-152,B:140-152)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
PUR_PYR_PR_TRANSFER
PS00103
Purine/pyrimidine phosphoribosyl transferases signature.
HGXR_PLAFG
140-152
4
A:140-152
B:140-152
-
-
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Exons
(0, 0)
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(1, 4)
Info
All SCOP Domains
1a: SCOP_d3ozga_ (A:)
1b: SCOP_d3ozgb_ (B:)
1c: SCOP_d3ozgc_ (C:)
1d: SCOP_d3ozgd_ (D:)
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Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
PRTase-like
(145)
Superfamily
:
PRTase-like
(145)
Family
:
automated matches
(39)
Protein domain
:
automated matches
(39)
Plasmodium falciparum [TaxId: 5838]
(2)
1a
d3ozga_
A:
1b
d3ozgb_
B:
1c
d3ozgc_
C:
1d
d3ozgd_
D:
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CATH Domains
(0, 0)
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Pfam Domains
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Asym.Unit (162 KB)
Header - Asym.Unit
Biol.Unit 1 (157 KB)
Header - Biol.Unit 1
Biol.Unit 2 (154 KB)
Header - Biol.Unit 2
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