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3OZ0
Asym. Unit
Info
Asym.Unit (48 KB)
Biol.Unit 1 (44 KB)
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(1)
Title
:
PPAR DELTA IN COMPLEX WITH AZPPARD02
Authors
:
D. Ogg
Date
:
24 Sep 10 (Deposition) - 19 Jan 11 (Release) - 29 Feb 12 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
3.00
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
Transcription Factor, Transcription, Nuclear Receptor Fold, Transcription Regulation, Transcription-Transcription Regulator Complex
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
C. A. Luckhurst, L. A. Stein, M. Furber, N. Webb, M. J. Ratcliffe, G. Allenby, S. Botterell, W. Tomlinson, B. Martin, A. Walding
Discovery Of Isoindoline And Tetrahydroisoquinoline Derivatives As Potent, Selective Pparδ Agonists
Bioorg. Med. Chem. Lett. V. 21 492 2011
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Hetero Components
(1, 1)
Info
All Hetero Components
1a: [4-({(1S)-1-[(2,4-DICHLOROPHENYL)C... (3OZa)
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No.
Name
Count
Type
Full Name
1
3OZ
1
Ligand/Ion
[4-({(1S)-1-[(2,4-DICHLOROPHENYL)CARBAMOYL]-1,3-DIHYDRO-2H-ISOINDOL-2-YL}METHYL)-2-METHYLPHENOXY]ACETIC ACID
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Sites
(1, 1)
Info
All Sites
1: AC1 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
VAL A:281 , PHE A:282 , ARG A:284 , CYS A:285 , THR A:288 , THR A:289 , HIS A:323 , PHE A:327 , LEU A:330 , VAL A:334 , LEU A:339 , VAL A:341 , LEU A:353 , ILE A:363 , LYS A:367 , HIS A:449 , MET A:453 , LEU A:469 , TYR A:473
BINDING SITE FOR RESIDUE 3OZ A 1
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
(0, 0)
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;
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Exons
(3, 3)
Info
All Exons
Exon 1.7 (A:211-245 (gaps))
Exon 1.8a (A:246-396)
Exon 1.9 (A:396-476)
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1: Boundary 1.6/1.7
2: Boundary 1.7/1.8a
3: Boundary 1.8a/1.9
4: Boundary 1.9/-
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1a
ENST00000360694
1a
ENSE00001407360
chr6:
35310335-35310458
124
PPARD_HUMAN
-
0
0
-
-
1.2
ENST00000360694
2
ENSE00001173010
chr6:
35314844-35314927
84
PPARD_HUMAN
-
0
0
-
-
1.4
ENST00000360694
4
ENSE00001159519
chr6:
35378764-35378994
231
PPARD_HUMAN
1-44
44
0
-
-
1.5
ENST00000360694
5
ENSE00001032078
chr6:
35387904-35388058
155
PPARD_HUMAN
44-95
52
0
-
-
1.6
ENST00000360694
6
ENSE00000747035
chr6:
35389597-35389735
139
PPARD_HUMAN
96-142
47
0
-
-
1.7
ENST00000360694
7
ENSE00000747037
chr6:
35391723-35391925
203
PPARD_HUMAN
142-209
68
1
A:211-245 (gaps)
35
1.8a
ENST00000360694
8a
ENSE00001324592
chr6:
35392106-35392556
451
PPARD_HUMAN
210-360
151
1
A:246-396
151
1.9
ENST00000360694
9
ENSE00001401034
chr6:
35393609-35395955
2347
PPARD_HUMAN
360-441
82
1
A:396-476
81
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SCOP Domains
(1, 1)
Info
All SCOP Domains
1a: SCOP_d3oz0a_ (A:)
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Protein Domains
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Organisms
(
)
(
)
Class
:
All alpha proteins
(14657)
Fold
:
Nuclear receptor ligand-binding domain
(609)
Superfamily
:
Nuclear receptor ligand-binding domain
(609)
Family
:
Nuclear receptor ligand-binding domain
(598)
Protein domain
:
Peroxisome proliferator-activated receptor delta, PPAR-DELTA
(16)
Human (Homo sapiens) [TaxId: 9606]
(16)
1a
d3oz0a_
A:
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CATH Domains
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all CATH domains
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Pfam Domains
(1, 1)
Info
all PFAM domains
1a: PFAM_Hormone_recep_3oz0A01 (A:266-463)
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(
)
Clan
:
no clan defined [family: Hormone_recep]
(290)
Family
:
Hormone_recep
(290)
Homo sapiens (Human)
(244)
1a
Hormone_recep-3oz0A01
A:266-463
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Chain A
Asymmetric Unit 1
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Asym.Unit (48 KB)
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