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3OXN
Asym. Unit
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Asym.Unit (146 KB)
Biol.Unit 1 (72 KB)
Biol.Unit 2 (72 KB)
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(1)
Title
:
THE CRYSTAL STRUCTURE OF A PUTATIVE TRANSCRIPTIONAL REGULATOR FROM VIBRIO PARAHAEMOLYTICUS
Authors
:
Z. Zhang, S. K. Burley, S. Swaminathan, New York Sgx Research Cente Structural Genomics (Nysgxrc)
Date
:
21 Sep 10 (Deposition) - 13 Oct 10 (Release) - 13 Oct 10 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.70
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A,D (1x)
Biol. Unit 2: B,C (1x)
Keywords
:
Structural Genomics, Psi-2, Protein Structure Initiative, New York Sgx Research Center For Structural Genomics, Nysgxrc, Putative Transcriptional Regulator, Psi, Sgx, Transcription Regulator
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
Z. Zhang, S. K. Burley, S. Swaminathan
The Crystal Structure Of A Putative Transcriptional Regulator From Vibrio Parahaemolyticus
To Be Published
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Hetero Components
(2, 21)
Info
All Hetero Components
1a: SELENOMETHIONINE (MSEa)
1b: SELENOMETHIONINE (MSEb)
1c: SELENOMETHIONINE (MSEc)
1d: SELENOMETHIONINE (MSEd)
1e: SELENOMETHIONINE (MSEe)
1f: SELENOMETHIONINE (MSEf)
1g: SELENOMETHIONINE (MSEg)
1h: SELENOMETHIONINE (MSEh)
1i: SELENOMETHIONINE (MSEi)
1j: SELENOMETHIONINE (MSEj)
1k: SELENOMETHIONINE (MSEk)
1l: SELENOMETHIONINE (MSEl)
1m: SELENOMETHIONINE (MSEm)
1n: SELENOMETHIONINE (MSEn)
1o: SELENOMETHIONINE (MSEo)
1p: SELENOMETHIONINE (MSEp)
1q: SELENOMETHIONINE (MSEq)
1r: SELENOMETHIONINE (MSEr)
1s: SELENOMETHIONINE (MSEs)
1t: SELENOMETHIONINE (MSEt)
2a: SULFATE ION (SO4a)
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No.
Name
Count
Type
Full Name
1
MSE
20
Mod. Amino Acid
SELENOMETHIONINE
2
SO4
1
Ligand/Ion
SULFATE ION
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Sites
(1, 1)
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1: AC1 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
HOH D:58 , THR D:123 , HIS D:154 , ARG D:172 , ILE D:220 , SER D:221 , TYR D:291
BINDING SITE FOR RESIDUE SO4 D 1
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SAPs(SNPs)/Variants
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 4)
Info
All SCOP Domains
1a: SCOP_d3oxna_ (A:)
1b: SCOP_d3oxnb_ (B:)
1c: SCOP_d3oxnc_ (C:)
1d: SCOP_d3oxnd_ (D:)
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Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
Periplasmic binding protein-like II
(813)
Superfamily
:
Periplasmic binding protein-like II
(813)
Family
:
automated matches
(267)
Protein domain
:
automated matches
(267)
Vibrio parahaemolyticus [TaxId: 670]
(1)
1a
d3oxna_
A:
1b
d3oxnb_
B:
1c
d3oxnc_
C:
1d
d3oxnd_
D:
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CATH Domains
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Pfam Domains
(1, 4)
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all PFAM domains
1a: PFAM_LysR_substrate_3oxnD01 (D:112-317)
1b: PFAM_LysR_substrate_3oxnD02 (D:112-317)
1c: PFAM_LysR_substrate_3oxnD03 (D:112-317)
1d: PFAM_LysR_substrate_3oxnD04 (D:112-317)
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Clan
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PBP
(391)
Family
:
LysR_substrate
(13)
Vibrio parahaemolyticus
(1)
1a
LysR_substrate-3oxnD01
D:112-317
1b
LysR_substrate-3oxnD02
D:112-317
1c
LysR_substrate-3oxnD03
D:112-317
1d
LysR_substrate-3oxnD04
D:112-317
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Asym.Unit (146 KB)
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