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3OV2
Biol. Unit 2
Info
Asym.Unit (527 KB)
Biol.Unit 1 (264 KB)
Biol.Unit 2 (262 KB)
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(1)
Title
:
CURCUMIN SYNTHASE 1 FROM CURCUMA LONGA
Authors
:
Y. Katsuyama, K. Miyazono, M. Tanokura, Y. Ohnishi, S. Horinouchi
Date
:
15 Sep 10 (Deposition) - 08 Dec 10 (Release) - 08 Dec 10 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.32
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A,B (1x)
Biol. Unit 2: C,D (1x)
Keywords
:
Type Iii Polyketide Synthase, Transferase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
Y. Katsuyama, K. Miyazono, M. Tanokura, Y. Ohnishi, S. Horinouchi
A Hydrophobic Cavity Discovered In A Curcumin Synthase Facilitates Utilization Of A Beta-Keto Acid As An Extender Substrate For The Atypical Type Iii Polyleteide Synthase
To Be Published
[
close entry info
]
Hetero Components
(2, 32)
Info
All Hetero Components
1a: 1,2-ETHANEDIOL (EDOa)
1aa: 1,2-ETHANEDIOL (EDOaa)
1ab: 1,2-ETHANEDIOL (EDOab)
1ac: 1,2-ETHANEDIOL (EDOac)
1ad: 1,2-ETHANEDIOL (EDOad)
1ae: 1,2-ETHANEDIOL (EDOae)
1af: 1,2-ETHANEDIOL (EDOaf)
1ag: 1,2-ETHANEDIOL (EDOag)
1ah: 1,2-ETHANEDIOL (EDOah)
1ai: 1,2-ETHANEDIOL (EDOai)
1aj: 1,2-ETHANEDIOL (EDOaj)
1ak: 1,2-ETHANEDIOL (EDOak)
1al: 1,2-ETHANEDIOL (EDOal)
1am: 1,2-ETHANEDIOL (EDOam)
1an: 1,2-ETHANEDIOL (EDOan)
1ao: 1,2-ETHANEDIOL (EDOao)
1ap: 1,2-ETHANEDIOL (EDOap)
1aq: 1,2-ETHANEDIOL (EDOaq)
1ar: 1,2-ETHANEDIOL (EDOar)
1as: 1,2-ETHANEDIOL (EDOas)
1at: 1,2-ETHANEDIOL (EDOat)
1au: 1,2-ETHANEDIOL (EDOau)
1av: 1,2-ETHANEDIOL (EDOav)
1aw: 1,2-ETHANEDIOL (EDOaw)
1ax: 1,2-ETHANEDIOL (EDOax)
1ay: 1,2-ETHANEDIOL (EDOay)
1az: 1,2-ETHANEDIOL (EDOaz)
1b: 1,2-ETHANEDIOL (EDOb)
1ba: 1,2-ETHANEDIOL (EDOba)
1bb: 1,2-ETHANEDIOL (EDObb)
1bc: 1,2-ETHANEDIOL (EDObc)
1bd: 1,2-ETHANEDIOL (EDObd)
1be: 1,2-ETHANEDIOL (EDObe)
1bf: 1,2-ETHANEDIOL (EDObf)
1bg: 1,2-ETHANEDIOL (EDObg)
1bh: 1,2-ETHANEDIOL (EDObh)
1bi: 1,2-ETHANEDIOL (EDObi)
1bj: 1,2-ETHANEDIOL (EDObj)
1bk: 1,2-ETHANEDIOL (EDObk)
1c: 1,2-ETHANEDIOL (EDOc)
1d: 1,2-ETHANEDIOL (EDOd)
1e: 1,2-ETHANEDIOL (EDOe)
1f: 1,2-ETHANEDIOL (EDOf)
1g: 1,2-ETHANEDIOL (EDOg)
1h: 1,2-ETHANEDIOL (EDOh)
1i: 1,2-ETHANEDIOL (EDOi)
1j: 1,2-ETHANEDIOL (EDOj)
1k: 1,2-ETHANEDIOL (EDOk)
1l: 1,2-ETHANEDIOL (EDOl)
1m: 1,2-ETHANEDIOL (EDOm)
1n: 1,2-ETHANEDIOL (EDOn)
1o: 1,2-ETHANEDIOL (EDOo)
1p: 1,2-ETHANEDIOL (EDOp)
1q: 1,2-ETHANEDIOL (EDOq)
1r: 1,2-ETHANEDIOL (EDOr)
1s: 1,2-ETHANEDIOL (EDOs)
1t: 1,2-ETHANEDIOL (EDOt)
1u: 1,2-ETHANEDIOL (EDOu)
1v: 1,2-ETHANEDIOL (EDOv)
1w: 1,2-ETHANEDIOL (EDOw)
1x: 1,2-ETHANEDIOL (EDOx)
1y: 1,2-ETHANEDIOL (EDOy)
1z: 1,2-ETHANEDIOL (EDOz)
2a: MALONATE ION (MLIa)
2b: MALONATE ION (MLIb)
2c: MALONATE ION (MLIc)
2d: MALONATE ION (MLId)
2e: MALONATE ION (MLIe)
2f: MALONATE ION (MLIf)
2g: MALONATE ION (MLIg)
2h: MALONATE ION (MLIh)
2i: MALONATE ION (MLIi)
2j: MALONATE ION (MLIj)
2k: MALONATE ION (MLIk)
2l: MALONATE ION (MLIl)
2m: MALONATE ION (MLIm)
2n: MALONATE ION (MLIn)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
EDO
27
Ligand/Ion
1,2-ETHANEDIOL
2
MLI
5
Ligand/Ion
MALONATE ION
[
close Hetero Component info
]
Sites
(37, 37)
Info
All Sites
01: AC2 (SOFTWARE)
02: AC4 (SOFTWARE)
03: AC6 (SOFTWARE)
04: BC2 (SOFTWARE)
05: BC5 (SOFTWARE)
06: CC2 (SOFTWARE)
07: CC5 (SOFTWARE)
08: CC8 (SOFTWARE)
09: DC1 (SOFTWARE)
10: DC3 (SOFTWARE)
11: DC4 (SOFTWARE)
12: DC6 (SOFTWARE)
13: DC7 (SOFTWARE)
14: DC8 (SOFTWARE)
15: DC9 (SOFTWARE)
16: EC1 (SOFTWARE)
17: EC2 (SOFTWARE)
18: EC4 (SOFTWARE)
19: EC6 (SOFTWARE)
20: EC7 (SOFTWARE)
21: EC9 (SOFTWARE)
22: FC4 (SOFTWARE)
23: FC5 (SOFTWARE)
24: FC7 (SOFTWARE)
25: FC9 (SOFTWARE)
26: GC3 (SOFTWARE)
27: GC4 (SOFTWARE)
28: GC7 (SOFTWARE)
29: GC9 (SOFTWARE)
30: HC1 (SOFTWARE)
31: HC3 (SOFTWARE)
32: HC4 (SOFTWARE)
33: HC5 (SOFTWARE)
34: HC9 (SOFTWARE)
35: IC2 (SOFTWARE)
36: IC3 (SOFTWARE)
37: IC4 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC2
SOFTWARE
ILE D:132 , SER D:133 , ILE D:193 , THR D:194 , VAL D:195 , LEU D:196 , SER D:197 , PHE D:265 , GLN D:338 , HOH D:534
BINDING SITE FOR RESIDUE MLI D 394
02
AC4
SOFTWARE
THR C:246 , ALA D:145 , THR D:146 , LEU D:150 , PRO D:151 , LEU D:152 , VAL D:154 , ARG D:156
BINDING SITE FOR RESIDUE MLI D 395
03
AC6
SOFTWARE
CYS D:164 , LEU D:271 , ASN D:336 , EDO D:402 , HOH D:494
BINDING SITE FOR RESIDUE MLI D 396
04
BC2
SOFTWARE
GLY B:252 , LYS D:107 , LEU D:147 , HOH D:417
BINDING SITE FOR RESIDUE MLI D 397
05
BC5
SOFTWARE
CYS C:164 , ASN C:336 , PHE C:373 , GLY C:374 , EDO C:401 , HOH C:443
BINDING SITE FOR RESIDUE MLI C 394
06
CC2
SOFTWARE
TYR C:31 , GLU C:32 , THR C:35 , PHE C:36
BINDING SITE FOR RESIDUE EDO C 395
07
CC5
SOFTWARE
THR D:24 , PHE D:344 , ASP D:347 , GLU D:348
BINDING SITE FOR RESIDUE EDO D 398
08
CC8
SOFTWARE
ASP D:322 , SER D:325 , THR D:326 , ARG D:352 , ASP D:363
BINDING SITE FOR RESIDUE EDO D 399
09
DC1
SOFTWARE
GLU C:249 , GLN C:251 , GLY C:252
BINDING SITE FOR RESIDUE EDO C 396
10
DC3
SOFTWARE
ASP C:92 , ARG D:259 , PHE D:261
BINDING SITE FOR RESIDUE EDO D 400
11
DC4
SOFTWARE
ASN D:269 , GLN D:270 , HOH D:433
BINDING SITE FOR RESIDUE EDO D 401
12
DC6
SOFTWARE
TRP C:307 , ASP C:311
BINDING SITE FOR RESIDUE EDO C 397
13
DC7
SOFTWARE
GLY C:139 , ASP C:141 , ARG C:156 , GLN D:162 , ALA D:163 , HIS D:165 , PRO D:375 , EDO D:410
BINDING SITE FOR RESIDUE EDO C 398
14
DC8
SOFTWARE
GLN C:33 , CYS C:60 , GLU C:61 , HOH C:553
BINDING SITE FOR RESIDUE EDO C 399
15
DC9
SOFTWARE
GLU C:32 , GLN C:33 , SER C:34 , LYS C:66
BINDING SITE FOR RESIDUE EDO C 400
16
EC1
SOFTWARE
GLY D:305 , ASN D:306 , MLI D:396
BINDING SITE FOR RESIDUE EDO D 402
17
EC2
SOFTWARE
GLY C:305 , ASN C:306 , MLI C:394 , HOH C:453
BINDING SITE FOR RESIDUE EDO C 401
18
EC4
SOFTWARE
GLU B:356 , SER D:325
BINDING SITE FOR RESIDUE EDO B 405
19
EC6
SOFTWARE
ALA C:145 , LEU C:150 , PRO C:151 , LEU C:152 , ARG C:156 , HOH C:516 , THR D:246
BINDING SITE FOR RESIDUE EDO C 402
20
EC7
SOFTWARE
HIS C:126 , ASN C:155 , LEU C:157 , LEU C:177 , ARG D:172 , HOH D:515
BINDING SITE FOR RESIDUE EDO C 403
21
EC9
SOFTWARE
ARG D:182 , GLY D:183 , ALA D:184
BINDING SITE FOR RESIDUE EDO D 403
22
FC4
SOFTWARE
GLN D:95 , ILE D:132 , SER D:133 , GLY D:134 , ILE D:135 , SER D:161 , LEU D:196 , TRP D:263
BINDING SITE FOR RESIDUE EDO D 404
23
FC5
SOFTWARE
HIS D:71 , ILE D:97 , GLU D:101 , EDO D:406
BINDING SITE FOR RESIDUE EDO D 405
24
FC7
SOFTWARE
ARG C:80 , PRO C:81 , LYS C:82 , ASP C:93
BINDING SITE FOR RESIDUE EDO C 404
25
FC9
SOFTWARE
ASP A:277 , HOH A:481 , GLN C:50 , GLU C:51
BINDING SITE FOR RESIDUE EDO A 408
26
GC3
SOFTWARE
GLU A:249 , SER A:250 , GLN A:251 , GLY A:252 , ALA A:253 , LYS C:54
BINDING SITE FOR RESIDUE EDO A 409
27
GC4
SOFTWARE
GLN C:95 , ILE C:132 , SER C:133 , GLY C:134 , ILE C:135 , SER C:161 , LEU C:196 , TRP C:263
BINDING SITE FOR RESIDUE EDO C 405
28
GC7
SOFTWARE
GLU B:203 , ILE D:76 , GLU D:79 , ARG D:80 , EDO D:405
BINDING SITE FOR RESIDUE EDO D 406
29
GC9
SOFTWARE
LEU D:30 , TYR D:31 , GLU D:32 , THR D:35 , PHE D:39 , HOH D:504
BINDING SITE FOR RESIDUE EDO D 407
30
HC1
SOFTWARE
LYS B:55 , PHE B:206 , GLU D:79
BINDING SITE FOR RESIDUE EDO B 413
31
HC3
SOFTWARE
SER D:197 , ARG D:199 , GLN D:212 , TRP D:263 , THR D:264 , PHE D:265
BINDING SITE FOR RESIDUE EDO D 408
32
HC4
SOFTWARE
GLY D:183 , ASP D:227 , LEU D:229
BINDING SITE FOR RESIDUE EDO D 409
33
HC5
SOFTWARE
GLU A:79 , VAL C:247 , ALA C:248 , GLU C:249
BINDING SITE FOR RESIDUE EDO C 406
34
HC9
SOFTWARE
ASP C:141 , ARG C:156 , MET C:158 , EDO C:398 , GLN D:162 , HIS D:165 , GLN D:244
BINDING SITE FOR RESIDUE EDO D 410
35
IC2
SOFTWARE
ASP D:297 , LEU D:365 , GLN D:366 , TRP D:367
BINDING SITE FOR RESIDUE EDO D 411
36
IC3
SOFTWARE
ALA A:248 , ILE A:274 , LYS C:54
BINDING SITE FOR RESIDUE EDO A 417
37
IC4
SOFTWARE
GLU C:207 , GLY C:252 , PHE C:267 , HOH C:550
BINDING SITE FOR RESIDUE EDO C 407
[
close Site info
]
SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are only available for the asymmetric unit)
All SNPs/Variants
View:
Select:
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Sorry, no Info available
[
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PROSITE Patterns/Profiles
(, 0)
Info
All PROSITE Patterns/Profiles
;
View:
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Label:
End label:
Sorry, no Info available
[
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Exons
(0, 0)
Info
All Exons
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All Exon Boundaries
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Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(1, 8)
Info
All SCOP Domains
1a: SCOP_d3ov2a1 (A:3-235)
1b: SCOP_d3ov2a2 (A:236-391)
1c: SCOP_d3ov2b1 (B:3-235)
1d: SCOP_d3ov2b2 (B:236-391)
1e: SCOP_d3ov2c1 (C:2-235)
1f: SCOP_d3ov2c2 (C:236-393)
1g: SCOP_d3ov2d1 (D:3-235)
1h: SCOP_d3ov2d2 (D:236-391)
View:
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Classes
(
)
(
)
Folds
(
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(
)
Superfamilies
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)
(
)
Families
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)
(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
Thiolase-like
(231)
Superfamily
:
Thiolase-like
(231)
Family
:
automated matches
(108)
Protein domain
:
automated matches
(108)
Curcuma longa [TaxId: 136217]
(2)
1a
d3ov2a1
A:3-235
1b
d3ov2a2
A:236-391
1c
d3ov2b1
B:3-235
1d
d3ov2b2
B:236-391
1e
d3ov2c1
C:2-235
1f
d3ov2c2
C:236-393
1g
d3ov2d1
D:3-235
1h
d3ov2d2
D:236-391
[
close SCOP info
]
CATH Domains
(0, 0)
Info
all CATH domains
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Label:
Sorry, no Info available
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Pfam Domains
(0, 0)
Info
all PFAM domains
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Sorry, no Info available
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Protein & NOT Site
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Chain C
Chain D
Asymmetric Unit 1
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select all 'ALA' residues (Alanines) in chain 'A'
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select residue range 5 to 10 in all chains
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select residue range 5 to 10 in chain 'A'
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Asym.Unit (527 KB)
Header - Asym.Unit
Biol.Unit 1 (264 KB)
Header - Biol.Unit 1
Biol.Unit 2 (262 KB)
Header - Biol.Unit 2
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