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3OV2
Biol. Unit 1
Info
Asym.Unit (527 KB)
Biol.Unit 1 (264 KB)
Biol.Unit 2 (262 KB)
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(1)
Title
:
CURCUMIN SYNTHASE 1 FROM CURCUMA LONGA
Authors
:
Y. Katsuyama, K. Miyazono, M. Tanokura, Y. Ohnishi, S. Horinouchi
Date
:
15 Sep 10 (Deposition) - 08 Dec 10 (Release) - 08 Dec 10 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.32
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A,B (1x)
Biol. Unit 2: C,D (1x)
Keywords
:
Type Iii Polyketide Synthase, Transferase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
Y. Katsuyama, K. Miyazono, M. Tanokura, Y. Ohnishi, S. Horinouchi
A Hydrophobic Cavity Discovered In A Curcumin Synthase Facilitates Utilization Of A Beta-Keto Acid As An Extender Substrate For The Atypical Type Iii Polyleteide Synthase
To Be Published
[
close entry info
]
Hetero Components
(2, 45)
Info
All Hetero Components
1a: 1,2-ETHANEDIOL (EDOa)
1aa: 1,2-ETHANEDIOL (EDOaa)
1ab: 1,2-ETHANEDIOL (EDOab)
1ac: 1,2-ETHANEDIOL (EDOac)
1ad: 1,2-ETHANEDIOL (EDOad)
1ae: 1,2-ETHANEDIOL (EDOae)
1af: 1,2-ETHANEDIOL (EDOaf)
1ag: 1,2-ETHANEDIOL (EDOag)
1ah: 1,2-ETHANEDIOL (EDOah)
1ai: 1,2-ETHANEDIOL (EDOai)
1aj: 1,2-ETHANEDIOL (EDOaj)
1ak: 1,2-ETHANEDIOL (EDOak)
1al: 1,2-ETHANEDIOL (EDOal)
1am: 1,2-ETHANEDIOL (EDOam)
1an: 1,2-ETHANEDIOL (EDOan)
1ao: 1,2-ETHANEDIOL (EDOao)
1ap: 1,2-ETHANEDIOL (EDOap)
1aq: 1,2-ETHANEDIOL (EDOaq)
1ar: 1,2-ETHANEDIOL (EDOar)
1as: 1,2-ETHANEDIOL (EDOas)
1at: 1,2-ETHANEDIOL (EDOat)
1au: 1,2-ETHANEDIOL (EDOau)
1av: 1,2-ETHANEDIOL (EDOav)
1aw: 1,2-ETHANEDIOL (EDOaw)
1ax: 1,2-ETHANEDIOL (EDOax)
1ay: 1,2-ETHANEDIOL (EDOay)
1az: 1,2-ETHANEDIOL (EDOaz)
1b: 1,2-ETHANEDIOL (EDOb)
1ba: 1,2-ETHANEDIOL (EDOba)
1bb: 1,2-ETHANEDIOL (EDObb)
1bc: 1,2-ETHANEDIOL (EDObc)
1bd: 1,2-ETHANEDIOL (EDObd)
1be: 1,2-ETHANEDIOL (EDObe)
1bf: 1,2-ETHANEDIOL (EDObf)
1bg: 1,2-ETHANEDIOL (EDObg)
1bh: 1,2-ETHANEDIOL (EDObh)
1bi: 1,2-ETHANEDIOL (EDObi)
1bj: 1,2-ETHANEDIOL (EDObj)
1bk: 1,2-ETHANEDIOL (EDObk)
1c: 1,2-ETHANEDIOL (EDOc)
1d: 1,2-ETHANEDIOL (EDOd)
1e: 1,2-ETHANEDIOL (EDOe)
1f: 1,2-ETHANEDIOL (EDOf)
1g: 1,2-ETHANEDIOL (EDOg)
1h: 1,2-ETHANEDIOL (EDOh)
1i: 1,2-ETHANEDIOL (EDOi)
1j: 1,2-ETHANEDIOL (EDOj)
1k: 1,2-ETHANEDIOL (EDOk)
1l: 1,2-ETHANEDIOL (EDOl)
1m: 1,2-ETHANEDIOL (EDOm)
1n: 1,2-ETHANEDIOL (EDOn)
1o: 1,2-ETHANEDIOL (EDOo)
1p: 1,2-ETHANEDIOL (EDOp)
1q: 1,2-ETHANEDIOL (EDOq)
1r: 1,2-ETHANEDIOL (EDOr)
1s: 1,2-ETHANEDIOL (EDOs)
1t: 1,2-ETHANEDIOL (EDOt)
1u: 1,2-ETHANEDIOL (EDOu)
1v: 1,2-ETHANEDIOL (EDOv)
1w: 1,2-ETHANEDIOL (EDOw)
1x: 1,2-ETHANEDIOL (EDOx)
1y: 1,2-ETHANEDIOL (EDOy)
1z: 1,2-ETHANEDIOL (EDOz)
2a: MALONATE ION (MLIa)
2b: MALONATE ION (MLIb)
2c: MALONATE ION (MLIc)
2d: MALONATE ION (MLId)
2e: MALONATE ION (MLIe)
2f: MALONATE ION (MLIf)
2g: MALONATE ION (MLIg)
2h: MALONATE ION (MLIh)
2i: MALONATE ION (MLIi)
2j: MALONATE ION (MLIj)
2k: MALONATE ION (MLIk)
2l: MALONATE ION (MLIl)
2m: MALONATE ION (MLIm)
2n: MALONATE ION (MLIn)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
EDO
36
Ligand/Ion
1,2-ETHANEDIOL
2
MLI
9
Ligand/Ion
MALONATE ION
[
close Hetero Component info
]
Sites
(48, 48)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC3 (SOFTWARE)
03: AC5 (SOFTWARE)
04: AC7 (SOFTWARE)
05: AC8 (SOFTWARE)
06: AC9 (SOFTWARE)
07: BC1 (SOFTWARE)
08: BC2 (SOFTWARE)
09: BC3 (SOFTWARE)
10: BC4 (SOFTWARE)
11: BC6 (SOFTWARE)
12: BC7 (SOFTWARE)
13: BC8 (SOFTWARE)
14: BC9 (SOFTWARE)
15: CC1 (SOFTWARE)
16: CC3 (SOFTWARE)
17: CC4 (SOFTWARE)
18: CC6 (SOFTWARE)
19: CC7 (SOFTWARE)
20: CC9 (SOFTWARE)
21: DC2 (SOFTWARE)
22: DC5 (SOFTWARE)
23: EC3 (SOFTWARE)
24: EC4 (SOFTWARE)
25: EC5 (SOFTWARE)
26: EC8 (SOFTWARE)
27: FC1 (SOFTWARE)
28: FC2 (SOFTWARE)
29: FC3 (SOFTWARE)
30: FC6 (SOFTWARE)
31: FC8 (SOFTWARE)
32: FC9 (SOFTWARE)
33: GC1 (SOFTWARE)
34: GC2 (SOFTWARE)
35: GC3 (SOFTWARE)
36: GC5 (SOFTWARE)
37: GC6 (SOFTWARE)
38: GC7 (SOFTWARE)
39: GC8 (SOFTWARE)
40: HC1 (SOFTWARE)
41: HC2 (SOFTWARE)
42: HC5 (SOFTWARE)
43: HC6 (SOFTWARE)
44: HC7 (SOFTWARE)
45: HC8 (SOFTWARE)
46: IC1 (SOFTWARE)
47: IC3 (SOFTWARE)
48: IC5 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
CYS A:164 , HIS A:303 , ASN A:336 , PHE A:373 , GLY A:374 , HOH A:480
BINDING SITE FOR RESIDUE MLI A 394
02
AC3
SOFTWARE
THR A:24 , TYR A:334 , PHE A:344 , ASP A:347 , GLU A:348
BINDING SITE FOR RESIDUE MLI A 395
03
AC5
SOFTWARE
CYS B:164 , LEU B:271 , HIS B:303 , GLY B:305 , ASN B:336 , PHE B:373 , MLI B:396
BINDING SITE FOR RESIDUE MLI B 394
04
AC7
SOFTWARE
PRO B:27 , PRO B:28 , HIS B:71 , GLU B:101 , HOH B:483
BINDING SITE FOR RESIDUE MLI B 395
05
AC8
SOFTWARE
ASP A:141 , ARG A:156 , LEU A:157 , MET A:158 , GLN B:162 , HIS B:165 , MET B:166 , ALA B:169 , ARG B:172 , GLN B:244 , GLU B:380
BINDING SITE FOR RESIDUE MLI A 396
06
AC9
SOFTWARE
GLY B:214 , GLY B:305 , ASN B:306 , ASN B:336 , MLI B:394 , HOH B:532
BINDING SITE FOR RESIDUE MLI B 396
07
BC1
SOFTWARE
ALA A:145 , THR A:146 , LEU A:150 , PRO A:151 , LEU A:152 , ARG A:156 , THR B:246
BINDING SITE FOR RESIDUE MLI A 397
08
BC2
SOFTWARE
GLY B:252 , LYS D:107 , LEU D:147 , HOH D:417
BINDING SITE FOR RESIDUE MLI D 397
09
BC3
SOFTWARE
MET A:243 , GLN A:244 , ARG A:285 , THR B:153 , ASN B:155
BINDING SITE FOR RESIDUE MLI B 397
10
BC4
SOFTWARE
ILE A:132 , SER A:133 , ILE A:193 , THR A:194 , VAL A:195 , LEU A:196 , SER A:197 , TRP A:263 , PHE A:265 , GLN A:338 , HOH A:461
BINDING SITE FOR RESIDUE MLI A 398
11
BC6
SOFTWARE
ARG B:119 , GLY B:183 , HOH B:476
BINDING SITE FOR RESIDUE EDO B 398
12
BC7
SOFTWARE
ALA B:145 , THR B:146 , LEU B:150 , PRO B:151
BINDING SITE FOR RESIDUE EDO B 399
13
BC8
SOFTWARE
LEU A:258 , ARG A:259 , EDO A:412 , GLN B:95 , HOH B:490
BINDING SITE FOR RESIDUE EDO A 399
14
BC9
SOFTWARE
LEU B:30 , TYR B:31 , GLU B:32 , THR B:35 , PHE B:36
BINDING SITE FOR RESIDUE EDO B 400
15
CC1
SOFTWARE
THR B:24 , PHE B:344 , ASP B:347 , GLU B:348 , HOH B:525
BINDING SITE FOR RESIDUE EDO B 401
16
CC3
SOFTWARE
GLU A:207 , GLY A:252 , TYR A:266 , HOH A:475
BINDING SITE FOR RESIDUE EDO A 400
17
CC4
SOFTWARE
ASP A:297 , LEU A:365 , GLN A:366 , TRP A:367
BINDING SITE FOR RESIDUE EDO A 401
18
CC6
SOFTWARE
ASP B:277
BINDING SITE FOR RESIDUE EDO B 402
19
CC7
SOFTWARE
HIS A:126 , ASN A:155 , ARG A:156 , LEU A:157 , LEU A:177 , HOH A:433 , ARG B:172
BINDING SITE FOR RESIDUE EDO A 402
20
CC9
SOFTWARE
ASP B:297 , GLN B:366 , TRP B:367
BINDING SITE FOR RESIDUE EDO B 403
21
DC2
SOFTWARE
TRP A:307 , ASP A:311
BINDING SITE FOR RESIDUE EDO A 403
22
DC5
SOFTWARE
THR B:194 , SER B:197 , GLY B:211 , GLN B:212 , PHE B:215
BINDING SITE FOR RESIDUE EDO B 404
23
EC3
SOFTWARE
LYS A:53 , LYS A:54 , ARG A:57 , HOH A:526
BINDING SITE FOR RESIDUE EDO A 404
24
EC4
SOFTWARE
GLU B:356 , SER D:325
BINDING SITE FOR RESIDUE EDO B 405
25
EC5
SOFTWARE
ARG B:182 , GLY B:183 , ASP B:227
BINDING SITE FOR RESIDUE EDO B 406
26
EC8
SOFTWARE
LYS A:234 , PRO A:235 , THR A:361 , HOH A:435 , HOH A:524
BINDING SITE FOR RESIDUE EDO A 405
27
FC1
SOFTWARE
GLU B:88 , ALA B:89
BINDING SITE FOR RESIDUE EDO B 407
28
FC2
SOFTWARE
GLN A:95 , ILE A:132 , GLY A:134 , ILE A:135 , SER A:161 , TRP A:263
BINDING SITE FOR RESIDUE EDO A 406
29
FC3
SOFTWARE
GLN B:95 , ILE B:132 , GLY B:134 , ILE B:135 , SER B:161 , LEU B:196 , TRP B:263
BINDING SITE FOR RESIDUE EDO B 408
30
FC6
SOFTWARE
SER B:133 , ILE B:193 , THR B:194 , VAL B:195 , LEU B:196 , SER B:197 , GLN B:338 , HOH B:491
BINDING SITE FOR RESIDUE EDO B 409
31
FC8
SOFTWARE
SER A:197 , ARG A:199 , GLN A:212 , TRP A:263 , THR A:264 , PHE A:265 , HOH A:459
BINDING SITE FOR RESIDUE EDO A 407
32
FC9
SOFTWARE
ASP A:277 , HOH A:481 , GLN C:50 , GLU C:51
BINDING SITE FOR RESIDUE EDO A 408
33
GC1
SOFTWARE
GLU B:123
BINDING SITE FOR RESIDUE EDO B 410
34
GC2
SOFTWARE
ASP A:48 , GLN A:50 , ILE B:114 , GLY B:118 , ARG B:119 , HOH B:455
BINDING SITE FOR RESIDUE EDO B 411
35
GC3
SOFTWARE
GLU A:249 , SER A:250 , GLN A:251 , GLY A:252 , ALA A:253 , LYS C:54
BINDING SITE FOR RESIDUE EDO A 409
36
GC5
SOFTWARE
ARG A:172 , HIS B:126 , LEU B:127 , ASN B:155 , ARG B:156 , LEU B:157 , LEU B:177 , HOH B:459
BINDING SITE FOR RESIDUE EDO B 412
37
GC6
SOFTWARE
GLN A:162 , HIS A:165 , MET A:166 , GLN A:244 , ASP B:141 , ARG B:156 , LEU B:157 , MET B:158
BINDING SITE FOR RESIDUE EDO A 410
38
GC7
SOFTWARE
GLU B:203 , ILE D:76 , GLU D:79 , ARG D:80 , EDO D:405
BINDING SITE FOR RESIDUE EDO D 406
39
GC8
SOFTWARE
LEU A:30 , TYR A:31 , GLU A:32 , THR A:35 , PHE A:36
BINDING SITE FOR RESIDUE EDO A 411
40
HC1
SOFTWARE
LYS B:55 , PHE B:206 , GLU D:79
BINDING SITE FOR RESIDUE EDO B 413
41
HC2
SOFTWARE
HIS A:257 , EDO A:399 , ASP B:136
BINDING SITE FOR RESIDUE EDO A 412
42
HC5
SOFTWARE
GLU A:79 , VAL C:247 , ALA C:248 , GLU C:249
BINDING SITE FOR RESIDUE EDO C 406
43
HC6
SOFTWARE
THR A:194 , SER A:197 , GLY A:211 , GLN A:212
BINDING SITE FOR RESIDUE EDO A 413
44
HC7
SOFTWARE
GLU A:294 , TRP A:295 , ASN A:296 , LEU A:317
BINDING SITE FOR RESIDUE EDO A 414
45
HC8
SOFTWARE
LYS A:175 , ALA A:241 , ALA A:242
BINDING SITE FOR RESIDUE EDO A 415
46
IC1
SOFTWARE
LYS A:112 , LYS A:115 , HOH A:509
BINDING SITE FOR RESIDUE EDO A 416
47
IC3
SOFTWARE
ALA A:248 , ILE A:274 , LYS C:54
BINDING SITE FOR RESIDUE EDO A 417
48
IC5
SOFTWARE
SER B:197 , ARG B:199 , ALA B:208 , TRP B:263 , THR B:264 , PHE B:265
BINDING SITE FOR RESIDUE EDO B 414
[
close Site info
]
SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are only available for the asymmetric unit)
All SNPs/Variants
View:
Select:
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Sorry, no Info available
[
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PROSITE Patterns/Profiles
(, 0)
Info
All PROSITE Patterns/Profiles
;
View:
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Label:
End label:
Sorry, no Info available
[
close PROSITE info
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Exons
(0, 0)
Info
All Exons
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All Exon Boundaries
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Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(1, 8)
Info
All SCOP Domains
1a: SCOP_d3ov2a1 (A:3-235)
1b: SCOP_d3ov2a2 (A:236-391)
1c: SCOP_d3ov2b1 (B:3-235)
1d: SCOP_d3ov2b2 (B:236-391)
1e: SCOP_d3ov2c1 (C:2-235)
1f: SCOP_d3ov2c2 (C:236-393)
1g: SCOP_d3ov2d1 (D:3-235)
1h: SCOP_d3ov2d2 (D:236-391)
View:
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Classes
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(
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Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
Thiolase-like
(231)
Superfamily
:
Thiolase-like
(231)
Family
:
automated matches
(108)
Protein domain
:
automated matches
(108)
Curcuma longa [TaxId: 136217]
(2)
1a
d3ov2a1
A:3-235
1b
d3ov2a2
A:236-391
1c
d3ov2b1
B:3-235
1d
d3ov2b2
B:236-391
1e
d3ov2c1
C:2-235
1f
d3ov2c2
C:236-393
1g
d3ov2d1
D:3-235
1h
d3ov2d2
D:236-391
[
close SCOP info
]
CATH Domains
(0, 0)
Info
all CATH domains
View:
Select:
Label:
Sorry, no Info available
[
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Pfam Domains
(0, 0)
Info
all PFAM domains
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Label:
Sorry, no Info available
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select residue range 5 to 10 in chain 'A'
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Asym.Unit (527 KB)
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