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3OUG
Asym. Unit
Info
Asym.Unit (336 KB)
Biol.Unit 1 (158 KB)
Biol.Unit 2 (162 KB)
Biol.Unit 3 (317 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF CLEAVED L-ASPARTATE-ALPHA-DECARBOXYLASE FROM FRANCISELLA TULARENSIS
Authors
:
B. Nocek, M. Gu, L. Papazisi, W. Anderson, A. Joachimiak, Center For S Genomics Of Infectious Diseases (Csgid)
Date
:
14 Sep 10 (Deposition) - 20 Oct 10 (Release) - 20 Oct 10 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.55
Chains
:
Asym. Unit : A,B,C,E,F,G,H,I
Biol. Unit 1: A,B,C,E (1x)
Biol. Unit 2: F,G,H,I (1x)
Biol. Unit 3: A,B,C,E,F,G,H,I (1x)
Keywords
:
Structural Genomics, Center For Structural Genomics Of Infectious Diseases, Csgid, Double-Psi Beta Barrel, Aspartic Alpha- Decarboxylase, L-Aspartate 1-Carboxy-Lyase (Beta-Alanine-Forming), Pantothenate Biosynthesis, Lyase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
B. Nocek, M. Gu, L. Papazisi, W. Anderson, A. Joachimiak
Crystal Structure Of Cleaved L-Aspartate-Alpha-Decarboxylas From Francisella Tularensis
To Be Published
[
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]
Hetero Components
(3, 30)
Info
All Hetero Components
1a: CHLORIDE ION (CLa)
1b: CHLORIDE ION (CLb)
1c: CHLORIDE ION (CLc)
1d: CHLORIDE ION (CLd)
1e: CHLORIDE ION (CLe)
1f: CHLORIDE ION (CLf)
1g: CHLORIDE ION (CLg)
1h: CHLORIDE ION (CLh)
2a: GLYCEROL (GOLa)
2b: GLYCEROL (GOLb)
2c: GLYCEROL (GOLc)
2d: GLYCEROL (GOLd)
2e: GLYCEROL (GOLe)
2f: GLYCEROL (GOLf)
3a: SELENOMETHIONINE (MSEa)
3b: SELENOMETHIONINE (MSEb)
3c: SELENOMETHIONINE (MSEc)
3d: SELENOMETHIONINE (MSEd)
3e: SELENOMETHIONINE (MSEe)
3f: SELENOMETHIONINE (MSEf)
3g: SELENOMETHIONINE (MSEg)
3h: SELENOMETHIONINE (MSEh)
3i: SELENOMETHIONINE (MSEi)
3j: SELENOMETHIONINE (MSEj)
3k: SELENOMETHIONINE (MSEk)
3l: SELENOMETHIONINE (MSEl)
3m: SELENOMETHIONINE (MSEm)
3n: SELENOMETHIONINE (MSEn)
3o: SELENOMETHIONINE (MSEo)
3p: SELENOMETHIONINE (MSEp)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
CL
8
Ligand/Ion
CHLORIDE ION
2
GOL
6
Ligand/Ion
GLYCEROL
3
MSE
16
Mod. Amino Acid
SELENOMETHIONINE
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Sites
(14, 14)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
SER A:25 , ASN A:72 , PRO A:74 , ALA A:75 , ARG C:54 , HOH C:318
BINDING SITE FOR RESIDUE CL A 201
02
AC2
SOFTWARE
ARG A:54 , PRO B:74 , ALA B:75 , HOH B:261
BINDING SITE FOR RESIDUE CL A 112
03
AC3
SOFTWARE
SER A:4 , SER B:4 , LYS B:43 , TYR B:90 , HOH B:209 , HOH B:658 , LYS E:43
BINDING SITE FOR RESIDUE GOL A 302
04
AC4
SOFTWARE
ARG B:54 , SER E:25 , ASN E:72 , PRO E:74 , ALA E:75 , HOH E:368
BINDING SITE FOR RESIDUE CL B 201
05
AC5
SOFTWARE
SER C:25 , ASN C:72 , PRO C:74 , ALA C:75 , HOH C:439 , ARG E:54
BINDING SITE FOR RESIDUE CL C 201
06
AC6
SOFTWARE
LYS A:43 , SER C:4 , LYS C:43 , GLU C:56 , TYR C:90 , HOH C:187 , HOH C:684 , HOH C:1050
BINDING SITE FOR RESIDUE GOL C 302
07
AC7
SOFTWARE
ARG F:54 , ASN I:72 , PRO I:74 , ALA I:75 , HOH I:121
BINDING SITE FOR RESIDUE CL F 201
08
AC8
SOFTWARE
LYS F:43 , TYR F:90 , HOH F:303 , HOH F:1034 , HOH F:1125 , SER H:4 , GOL H:112 , LYS I:43
BINDING SITE FOR RESIDUE GOL F 301
09
AC9
SOFTWARE
SER F:4 , LYS G:43 , HOH G:199 , HOH G:698 , HOH G:1082 , GOL H:301 , SER I:4 , GLN I:92 , HOH I:323
BINDING SITE FOR RESIDUE GOL G 301
10
BC1
SOFTWARE
ARG G:54 , PRO H:74 , ALA H:75 , HOH H:960
BINDING SITE FOR RESIDUE CL G 201
11
BC2
SOFTWARE
PRO F:74 , ALA F:75 , ARG H:54 , HOH H:215
BINDING SITE FOR RESIDUE CL H 201
12
BC3
SOFTWARE
LYS G:43 , TYR G:90 , GOL G:301 , LYS H:43 , GOL H:112 , HOH H:152 , HOH H:327 , HOH H:451 , SER I:4
BINDING SITE FOR RESIDUE GOL H 301
13
BC4
SOFTWARE
LYS F:43 , GOL F:301 , SER G:4 , SER H:4 , LYS H:43 , TYR H:90 , GLN H:92 , HOH H:161 , GOL H:301 , HOH H:598 , HOH H:1078
BINDING SITE FOR RESIDUE GOL H 112
14
BC5
SOFTWARE
PRO G:74 , ALA G:75 , ARG I:54 , HOH I:181
BINDING SITE FOR RESIDUE CL I 201
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
(0, 0)
Info
All PROSITE Patterns/Profiles
;
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End label:
Sorry, no Info available
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Exons
(0, 0)
Info
All Exons
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All Exon Boundaries
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 8)
Info
All SCOP Domains
1a: SCOP_d3ouga_ (A:)
1b: SCOP_d3ougb_ (B:)
1c: SCOP_d3ougc_ (C:)
1d: SCOP_d3ouge_ (E:)
1e: SCOP_d3ougf_ (F:)
1f: SCOP_d3ougg_ (G:)
1g: SCOP_d3ough_ (H:)
1h: SCOP_d3ougi_ (I:)
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Protein Domains
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Class
:
All beta proteins
(24004)
Fold
:
Double psi beta-barrel
(111)
Superfamily
:
ADC-like
(88)
Family
:
automated matches
(19)
Protein domain
:
automated matches
(19)
Francisella tularensis [TaxId: 177416]
(1)
1a
d3ouga_
A:
1b
d3ougb_
B:
1c
d3ougc_
C:
1d
d3ouge_
E:
1e
d3ougf_
F:
1f
d3ougg_
G:
1g
d3ough_
H:
1h
d3ougi_
I:
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CATH Domains
(0, 0)
Info
all CATH domains
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Sorry, no Info available
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Pfam Domains
(1, 8)
Info
all PFAM domains
1a: PFAM_Asp_decarbox_3ougI01 (I:1-108)
1b: PFAM_Asp_decarbox_3ougI02 (I:1-108)
1c: PFAM_Asp_decarbox_3ougI03 (I:1-108)
1d: PFAM_Asp_decarbox_3ougI04 (I:1-108)
1e: PFAM_Asp_decarbox_3ougI05 (I:1-108)
1f: PFAM_Asp_decarbox_3ougI06 (I:1-108)
1g: PFAM_Asp_decarbox_3ougI07 (I:1-108)
1h: PFAM_Asp_decarbox_3ougI08 (I:1-108)
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Clans
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(
)
Clan
:
AcetylDC-like
(37)
Family
:
Asp_decarbox
(13)
Francisella tularensis subsp. tularensis
(1)
1a
Asp_decarbox-3ougI01
I:1-108
1b
Asp_decarbox-3ougI02
I:1-108
1c
Asp_decarbox-3ougI03
I:1-108
1d
Asp_decarbox-3ougI04
I:1-108
1e
Asp_decarbox-3ougI05
I:1-108
1f
Asp_decarbox-3ougI06
I:1-108
1g
Asp_decarbox-3ougI07
I:1-108
1h
Asp_decarbox-3ougI08
I:1-108
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Asymmetric Unit 1
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Asym.Unit (336 KB)
Header - Asym.Unit
Biol.Unit 1 (158 KB)
Header - Biol.Unit 1
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