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Asym. Unit
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Asym.Unit (177 KB)
Biol.Unit 1 (170 KB)
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(1)
Title
:
RESTRICTION ENDONUCLEASE HPY188I IN COMPLEX WITH PRODUCT DNA
Authors
:
M. Sokolowska, H. Czapinska, M. Bochtler
Date
:
06 Sep 10 (Deposition) - 20 Oct 10 (Release) - 06 Apr 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.95
Chains
:
Asym. Unit : A,B,C,D,E,F
Biol. Unit 1: A,B,C,D,E,F (1x)
Keywords
:
Endonuclease-Dna Complex, Restriction Enzyme, Hpy188I, Intercalation, Giy-Yig Nuclease, Catalytic Mechanism, Pseudopalindrome, Hydrolase- Dna Complex, Restriction Endonuclease, Dna
(Keyword Search:
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Reference
:
M. Sokolowska, H. Czapinska, M. Bochtler
Hpy188I-Dna Pre- And Post-Cleavage Complexes--Snapshots Of The Giy-Yig Nuclease Mediated Catalysis.
Nucleic Acids Res. V. 39 1554 2011
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Hetero Components
(3, 9)
Info
All Hetero Components
1a: CALCIUM ION (CAa)
1b: CALCIUM ION (CAb)
1c: CALCIUM ION (CAc)
2a: CHLORIDE ION (CLa)
2b: CHLORIDE ION (CLb)
2c: CHLORIDE ION (CLc)
2d: CHLORIDE ION (CLd)
3a: SELENOMETHIONINE (MSEa)
3b: SELENOMETHIONINE (MSEb)
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No.
Name
Count
Type
Full Name
1
CA
3
Ligand/Ion
CALCIUM ION
2
CL
4
Ligand/Ion
CHLORIDE ION
3
MSE
2
Mod. Amino Acid
SELENOMETHIONINE
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Sites
(10, 10)
Info
All Sites
01: AC1 (AUTHOR)
02: AC2 (AUTHOR)
03: AC3 (AUTHOR)
04: AC4 (AUTHOR)
05: AC5 (AUTHOR)
06: AC7 (AUTHOR)
07: BC1 (AUTHOR)
08: BC2 (AUTHOR)
09: BC5 (AUTHOR)
10: BC6 (AUTHOR)
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No.
Name
Evidence
Residues
Description
01
AC1
AUTHOR
GLU A:149 , HIS B:76 , DA D:0 , DG F:1 , HOH D:53 , HOH F:39
BINDING SITE FOR RESIDUE CA A 171, CONFORMER A
02
AC2
AUTHOR
GLU B:149 , HIS A:76 , DT C:0 , DG E:1 , HOH C:358 , HOH F:52
BINDING SITE FOR RESIDUE CA A 172, CONFORMER A
03
AC3
AUTHOR
ASP A:18 , ASP B:18 , HOH A:218 , HOH A:219 , HOH A:221 , HOH A:222
BINDING SITE FOR RESIDUE CA A 173
04
AC4
AUTHOR
ASN A:159 , HIS A:160 , GLU B:26 , HOH A:210
BINDING SITE FOR RESIDUE CL A 174
05
AC5
AUTHOR
SER B:143 , HOH B:201 , HOH B:230 , HOH A:178
BINDING SITE FOR RESIDUE CL A 175, CONFORMER A
06
AC7
AUTHOR
GLU A:26 , ASN B:159 , HIS B:160 , HOH B:176
BINDING SITE FOR RESIDUE CL B 171
07
BC1
AUTHOR
GLU A:149 , HIS B:76 , DT C:0 , DG E:1 , HOH D:53 , HOH F:39
BINDING SITE FOR RESIDUE CA A 171, CONFORMER B
08
BC2
AUTHOR
GLU B:149 , HIS A:76 , DA D:0 , DG F:1 , HOH C:358 , HOH F:52
BINDING SITE FOR RESIDUE CA A 172, CONFORMER B
09
BC5
AUTHOR
SER A:143 , HOH A:276 , HOH E:183 , HOH B:181
BINDING SITE FOR RESIDUE CL A 175, CONFORMER B
10
BC6
AUTHOR
LYS A:92 , HOH D:323
BINDING SITE FOR RESIDUE CL A 176
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SAPs(SNPs)/Variants
(0, 0)
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Exons
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SCOP Domains
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CATH Domains
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Pfam Domains
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Asymmetric Unit 1
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Asym.Unit (177 KB)
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