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3OOW
Asym. Unit
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Asym.Unit (426 KB)
Biol.Unit 1 (414 KB)
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(1)
Title
:
OCTAMERIC STRUCTURE OF THE PHOSPHORIBOSYLAMINOIMIDAZOLE CARBOXYLASE CATALYTIC SUBUNIT FROM FRANCISELLA TULARENSIS SUBSP. TULARENSIS SCHU S4.
Authors
:
E. V. Filippova, Z. Wawrzak, M. Kudritska, A. Edwards, A. Savchenko, F. W. Anderson, Center For Structural Genomics Of Infectious D (Csgid)
Date
:
31 Aug 10 (Deposition) - 15 Sep 10 (Release) - 15 Sep 10 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.75
Chains
:
Asym. Unit : A,B,C,D,E,F,G,H
Biol. Unit 1: A,B,C,D,E,F,G,H (1x)
Keywords
:
Structural Genomics, Center For Structural Genomics Of Infectious Diseases, Csgid, Phosphoribosylaminoimidazole Carboxylase, Catalyic Subunit, Pure, Francisella Tularensis Subsp. Tularensis Schu S4, Center For Structural Genomics Of Infectious Diseases (Csgid), Lyase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
E. V. Filippova, Z. Wawrzak, M. Kudritska, A. Edwards, A. Savchenko, F. W. Anderson
Octameric Structure Of The Phosphoribosylaminoimidazole Carboxylase Catalytic Subunit From Francisella Tularensis Subsp. Tularensis Schu S4.
To Be Published
[
close entry info
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Hetero Components
(5, 97)
Info
All Hetero Components
1a: CHLORIDE ION (CLa)
1b: CHLORIDE ION (CLb)
1c: CHLORIDE ION (CLc)
1d: CHLORIDE ION (CLd)
1e: CHLORIDE ION (CLe)
1f: CHLORIDE ION (CLf)
1g: CHLORIDE ION (CLg)
1h: CHLORIDE ION (CLh)
1i: CHLORIDE ION (CLi)
1j: CHLORIDE ION (CLj)
1k: CHLORIDE ION (CLk)
1l: CHLORIDE ION (CLl)
1m: CHLORIDE ION (CLm)
1n: CHLORIDE ION (CLn)
2a: FORMIC ACID (FMTa)
2b: FORMIC ACID (FMTb)
2c: FORMIC ACID (FMTc)
2d: FORMIC ACID (FMTd)
2e: FORMIC ACID (FMTe)
2f: FORMIC ACID (FMTf)
2g: FORMIC ACID (FMTg)
2h: FORMIC ACID (FMTh)
2i: FORMIC ACID (FMTi)
2j: FORMIC ACID (FMTj)
2k: FORMIC ACID (FMTk)
2l: FORMIC ACID (FMTl)
2m: FORMIC ACID (FMTm)
3a: (4S)-2-METHYL-2,4-PENTANEDIOL (MPDa)
3b: (4S)-2-METHYL-2,4-PENTANEDIOL (MPDb)
3c: (4S)-2-METHYL-2,4-PENTANEDIOL (MPDc)
3d: (4S)-2-METHYL-2,4-PENTANEDIOL (MPDd)
4a: SELENOMETHIONINE (MSEa)
4aa: SELENOMETHIONINE (MSEaa)
4ab: SELENOMETHIONINE (MSEab)
4ac: SELENOMETHIONINE (MSEac)
4ad: SELENOMETHIONINE (MSEad)
4ae: SELENOMETHIONINE (MSEae)
4af: SELENOMETHIONINE (MSEaf)
4ag: SELENOMETHIONINE (MSEag)
4ah: SELENOMETHIONINE (MSEah)
4ai: SELENOMETHIONINE (MSEai)
4aj: SELENOMETHIONINE (MSEaj)
4ak: SELENOMETHIONINE (MSEak)
4al: SELENOMETHIONINE (MSEal)
4am: SELENOMETHIONINE (MSEam)
4an: SELENOMETHIONINE (MSEan)
4ao: SELENOMETHIONINE (MSEao)
4ap: SELENOMETHIONINE (MSEap)
4aq: SELENOMETHIONINE (MSEaq)
4ar: SELENOMETHIONINE (MSEar)
4as: SELENOMETHIONINE (MSEas)
4at: SELENOMETHIONINE (MSEat)
4au: SELENOMETHIONINE (MSEau)
4av: SELENOMETHIONINE (MSEav)
4aw: SELENOMETHIONINE (MSEaw)
4b: SELENOMETHIONINE (MSEb)
4c: SELENOMETHIONINE (MSEc)
4d: SELENOMETHIONINE (MSEd)
4e: SELENOMETHIONINE (MSEe)
4f: SELENOMETHIONINE (MSEf)
4g: SELENOMETHIONINE (MSEg)
4h: SELENOMETHIONINE (MSEh)
4i: SELENOMETHIONINE (MSEi)
4j: SELENOMETHIONINE (MSEj)
4k: SELENOMETHIONINE (MSEk)
4l: SELENOMETHIONINE (MSEl)
4m: SELENOMETHIONINE (MSEm)
4n: SELENOMETHIONINE (MSEn)
4o: SELENOMETHIONINE (MSEo)
4p: SELENOMETHIONINE (MSEp)
4q: SELENOMETHIONINE (MSEq)
4r: SELENOMETHIONINE (MSEr)
4s: SELENOMETHIONINE (MSEs)
4t: SELENOMETHIONINE (MSEt)
4u: SELENOMETHIONINE (MSEu)
4v: SELENOMETHIONINE (MSEv)
4w: SELENOMETHIONINE (MSEw)
4x: SELENOMETHIONINE (MSEx)
4y: SELENOMETHIONINE (MSEy)
4z: SELENOMETHIONINE (MSEz)
5a: PHOSPHATE ION (PO4a)
5b: PHOSPHATE ION (PO4b)
5c: PHOSPHATE ION (PO4c)
5d: PHOSPHATE ION (PO4d)
5e: PHOSPHATE ION (PO4e)
5f: PHOSPHATE ION (PO4f)
5g: PHOSPHATE ION (PO4g)
5h: PHOSPHATE ION (PO4h)
5i: PHOSPHATE ION (PO4i)
5j: PHOSPHATE ION (PO4j)
5k: PHOSPHATE ION (PO4k)
5l: PHOSPHATE ION (PO4l)
5m: PHOSPHATE ION (PO4m)
5n: PHOSPHATE ION (PO4n)
5o: PHOSPHATE ION (PO4o)
5p: PHOSPHATE ION (PO4p)
5q: PHOSPHATE ION (PO4q)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
CL
14
Ligand/Ion
CHLORIDE ION
2
FMT
13
Ligand/Ion
FORMIC ACID
3
MPD
4
Ligand/Ion
(4S)-2-METHYL-2,4-PENTANEDIOL
4
MSE
49
Mod. Amino Acid
SELENOMETHIONINE
5
PO4
17
Ligand/Ion
PHOSPHATE ION
[
close Hetero Component info
]
Sites
(48, 48)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
17: BC8 (SOFTWARE)
18: BC9 (SOFTWARE)
19: CC1 (SOFTWARE)
20: CC2 (SOFTWARE)
21: CC3 (SOFTWARE)
22: CC4 (SOFTWARE)
23: CC5 (SOFTWARE)
24: CC6 (SOFTWARE)
25: CC7 (SOFTWARE)
26: CC8 (SOFTWARE)
27: CC9 (SOFTWARE)
28: DC1 (SOFTWARE)
29: DC2 (SOFTWARE)
30: DC3 (SOFTWARE)
31: DC4 (SOFTWARE)
32: DC5 (SOFTWARE)
33: DC6 (SOFTWARE)
34: DC7 (SOFTWARE)
35: DC8 (SOFTWARE)
36: DC9 (SOFTWARE)
37: EC1 (SOFTWARE)
38: EC2 (SOFTWARE)
39: EC3 (SOFTWARE)
40: EC4 (SOFTWARE)
41: EC5 (SOFTWARE)
42: EC6 (SOFTWARE)
43: EC7 (SOFTWARE)
44: EC8 (SOFTWARE)
45: EC9 (SOFTWARE)
46: FC1 (SOFTWARE)
47: FC2 (SOFTWARE)
48: FC3 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
HIS A:70 , LEU A:71 , HOH A:182 , HOH A:203
BINDING SITE FOR RESIDUE CL A 164
02
AC2
SOFTWARE
THR A:42 , ASP A:44 , LYS A:45 , HOH A:250
BINDING SITE FOR RESIDUE CL A 165
03
AC3
SOFTWARE
SER A:38 , HIS A:40 , ARG A:41 , PO4 A:167 , HOH A:182 , HOH A:311 , HOH A:531 , PRO G:106
BINDING SITE FOR RESIDUE PO4 A 166
04
AC4
SOFTWARE
GLY A:10 , SER A:11 , ASP A:14 , ALA A:65 , GLY A:66 , PO4 A:166 , HOH A:203
BINDING SITE FOR RESIDUE PO4 A 167
05
AC5
SOFTWARE
GLU A:51 , LYS A:78 , HOH A:465 , LYS D:141 , ASP G:44
BINDING SITE FOR RESIDUE PO4 A 168
06
AC6
SOFTWARE
ASN A:94 , ASN B:94 , ASN C:94 , ASN F:94
BINDING SITE FOR RESIDUE FMT A 169
07
AC7
SOFTWARE
GLY A:117 , MSE A:118 , HOH A:175 , HOH A:534
BINDING SITE FOR RESIDUE FMT A 170
08
AC8
SOFTWARE
THR B:42 , ASP B:44 , LYS B:45 , HOH B:205
BINDING SITE FOR RESIDUE CL B 164
09
AC9
SOFTWARE
ASN A:138 , GLY B:29 , ASP B:136 , ASN B:138 , ILE B:139 , HOH B:193 , HOH B:294
BINDING SITE FOR RESIDUE PO4 B 165
10
BC1
SOFTWARE
SER B:38 , HIS B:40 , ARG B:41 , FMT B:168 , HOH B:183 , HOH B:206 , PRO D:106
BINDING SITE FOR RESIDUE PO4 B 166
11
BC2
SOFTWARE
THR B:52 , ARG B:56
BINDING SITE FOR RESIDUE FMT B 167
12
BC3
SOFTWARE
SER B:11 , ASP B:14 , ALA B:65 , GLY B:66 , PO4 B:166
BINDING SITE FOR RESIDUE FMT B 168
13
BC4
SOFTWARE
MSE B:118
BINDING SITE FOR RESIDUE FMT B 169
14
BC5
SOFTWARE
HIS C:70 , LEU C:71 , HOH C:187 , HOH C:192
BINDING SITE FOR RESIDUE CL C 164
15
BC6
SOFTWARE
THR C:42 , ASP C:44 , LYS C:45 , HOH C:301
BINDING SITE FOR RESIDUE CL C 165
16
BC7
SOFTWARE
GLN B:96 , GLN C:96 , HOH C:526 , GLN D:96
BINDING SITE FOR RESIDUE MPD C 166
17
BC8
SOFTWARE
GLY C:10 , SER C:38 , HIS C:40 , ARG C:41 , PO4 C:168 , HOH C:187 , HOH C:207 , HOH C:335 , PRO H:106
BINDING SITE FOR RESIDUE PO4 C 167
18
BC9
SOFTWARE
GLY C:10 , SER C:11 , ASP C:14 , ALA C:65 , GLY C:66 , PO4 C:167 , HOH C:192
BINDING SITE FOR RESIDUE PO4 C 168
19
CC1
SOFTWARE
MSE C:118 , HOH C:177
BINDING SITE FOR RESIDUE FMT C 169
20
CC2
SOFTWARE
HIS D:70 , LEU D:71 , HOH D:172 , HOH D:202
BINDING SITE FOR RESIDUE CL D 164
21
CC3
SOFTWARE
THR D:42 , ASP D:44 , LYS D:45 , HOH E:302
BINDING SITE FOR RESIDUE CL D 165
22
CC4
SOFTWARE
GLN B:96 , GLN D:96 , HOH D:515 , HOH D:528 , GLN E:96
BINDING SITE FOR RESIDUE MPD D 166
23
CC5
SOFTWARE
PRO B:106 , GLY D:10 , SER D:38 , HIS D:40 , ARG D:41 , PO4 D:168 , HOH D:172 , HOH D:399
BINDING SITE FOR RESIDUE PO4 D 167
24
CC6
SOFTWARE
PRO B:106 , GLY D:10 , SER D:11 , ASP D:14 , ALA D:65 , GLY D:66 , PO4 D:167 , HOH D:202
BINDING SITE FOR RESIDUE PO4 D 168
25
CC7
SOFTWARE
GLY D:117 , MSE D:118 , HOH D:188
BINDING SITE FOR RESIDUE FMT D 169
26
CC8
SOFTWARE
HIS E:40 , HIS E:70 , LEU E:71 , HOH E:196 , HOH E:383
BINDING SITE FOR RESIDUE CL E 164
27
CC9
SOFTWARE
THR E:42 , ASP E:44 , LYS E:45 , HOH E:257 , HOH E:478
BINDING SITE FOR RESIDUE CL E 165
28
DC1
SOFTWARE
GLY E:10 , SER E:11 , ASP E:14 , ALA E:65 , GLY E:66 , PO4 E:167 , HOH E:383
BINDING SITE FOR RESIDUE PO4 E 166
29
DC2
SOFTWARE
SER E:38 , HIS E:40 , ARG E:41 , PO4 E:166 , HOH E:196 , HOH E:289 , PRO F:106
BINDING SITE FOR RESIDUE PO4 E 167
30
DC3
SOFTWARE
MSE E:118 , HOH E:183 , HOH E:509
BINDING SITE FOR RESIDUE FMT E 168
31
DC4
SOFTWARE
ASN E:94 , ASN H:94
BINDING SITE FOR RESIDUE FMT E 169
32
DC5
SOFTWARE
HIS F:40 , HIS F:70 , LEU F:71 , HOH F:174 , HOH F:221
BINDING SITE FOR RESIDUE CL F 164
33
DC6
SOFTWARE
THR F:42 , ASP F:44 , LYS F:45 , HOH F:286
BINDING SITE FOR RESIDUE CL F 165
34
DC7
SOFTWARE
GLN F:96 , HOH F:527 , GLN G:96 , LEU G:100
BINDING SITE FOR RESIDUE MPD F 166
35
DC8
SOFTWARE
PRO E:106 , GLY F:10 , SER F:38 , HIS F:40 , ARG F:41 , PO4 F:168 , HOH F:174 , HOH F:342
BINDING SITE FOR RESIDUE PO4 F 167
36
DC9
SOFTWARE
GLY F:10 , SER F:11 , ASP F:14 , ALA F:65 , GLY F:66 , PO4 F:167 , HOH F:221
BINDING SITE FOR RESIDUE PO4 F 168
37
EC1
SOFTWARE
GLY F:117 , MSE F:118 , HOH F:184
BINDING SITE FOR RESIDUE FMT F 169
38
EC2
SOFTWARE
HIS G:70 , LEU G:71 , HOH G:178 , HOH G:191
BINDING SITE FOR RESIDUE CL G 164
39
EC3
SOFTWARE
HOH C:530 , GLN G:96 , HOH G:529 , GLN H:96
BINDING SITE FOR RESIDUE MPD G 165
40
EC4
SOFTWARE
PRO A:106 , GLY G:10 , SER G:11 , ASP G:14 , ALA G:65 , GLY G:66 , PO4 G:167 , HOH G:178
BINDING SITE FOR RESIDUE PO4 G 166
41
EC5
SOFTWARE
PRO A:106 , SER G:38 , HIS G:40 , ARG G:41 , PO4 G:166 , HOH G:169 , HOH G:191 , HOH G:541
BINDING SITE FOR RESIDUE PO4 G 167
42
EC6
SOFTWARE
MSE G:118 , HOH G:186 , HOH G:188
BINDING SITE FOR RESIDUE FMT G 168
43
EC7
SOFTWARE
HIS H:70 , LEU H:71 , HOH H:191 , HOH H:262
BINDING SITE FOR RESIDUE CL H 164
44
EC8
SOFTWARE
THR H:42 , ASP H:44 , LYS H:45 , HOH H:194 , HOH H:475
BINDING SITE FOR RESIDUE CL H 165
45
EC9
SOFTWARE
GLY H:10 , SER H:11 , ASP H:14 , ALA H:65 , GLY H:66 , PO4 H:167 , HOH H:262
BINDING SITE FOR RESIDUE PO4 H 166
46
FC1
SOFTWARE
PRO C:106 , SER H:38 , HIS H:40 , ARG H:41 , PO4 H:166 , HOH H:191 , HOH H:351
BINDING SITE FOR RESIDUE PO4 H 167
47
FC2
SOFTWARE
MSE H:118 , HOH H:179 , HOH H:188
BINDING SITE FOR RESIDUE FMT H 168
48
FC3
SOFTWARE
GLY H:29
BINDING SITE FOR RESIDUE FMT H 169
[
close Site info
]
SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
View:
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Sorry, no Info available
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PROSITE Patterns/Profiles
(0, 0)
Info
All PROSITE Patterns/Profiles
;
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End label:
Sorry, no Info available
[
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]
Exons
(0, 0)
Info
All Exons
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All Exon Boundaries
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 8)
Info
All SCOP Domains
1a: SCOP_d3oowa_ (A:)
1b: SCOP_d3oowb_ (B:)
1c: SCOP_d3oowc_ (C:)
1d: SCOP_d3oowd_ (D:)
1e: SCOP_d3oowe_ (E:)
1f: SCOP_d3oowf_ (F:)
1g: SCOP_d3oowg_ (G:)
1h: SCOP_d3oowh_ (H:)
View:
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Classes
(
)
(
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Folds
(
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(
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Superfamilies
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(
)
Families
(
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(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
Flavodoxin-like
(1057)
Superfamily
:
N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE)
(32)
Family
:
N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE)
(22)
Protein domain
:
automated matches
(3)
Francisella tularensis [TaxId: 119856]
(2)
1a
d3oowa_
A:
1b
d3oowb_
B:
1c
d3oowc_
C:
1d
d3oowd_
D:
1e
d3oowe_
E:
1f
d3oowf_
F:
1g
d3oowg_
G:
1h
d3oowh_
H:
[
close SCOP info
]
CATH Domains
(0, 0)
Info
all CATH domains
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Label:
Sorry, no Info available
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Pfam Domains
(1, 8)
Info
all PFAM domains
1a: PFAM_AIRC_3oowH01 (H:3-154)
1b: PFAM_AIRC_3oowH02 (H:3-154)
1c: PFAM_AIRC_3oowH03 (H:3-154)
1d: PFAM_AIRC_3oowH04 (H:3-154)
1e: PFAM_AIRC_3oowH05 (H:3-154)
1f: PFAM_AIRC_3oowH06 (H:3-154)
1g: PFAM_AIRC_3oowH07 (H:3-154)
1h: PFAM_AIRC_3oowH08 (H:3-154)
View:
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Clans
(
)
(
)
Families
(
)
(
)
Organisms
(
)
(
)
Clan
:
no clan defined [family: AIRC]
(12)
Family
:
AIRC
(12)
Francisella tularensis subsp. tularensis
(2)
1a
AIRC-3oowH01
H:3-154
1b
AIRC-3oowH02
H:3-154
1c
AIRC-3oowH03
H:3-154
1d
AIRC-3oowH04
H:3-154
1e
AIRC-3oowH05
H:3-154
1f
AIRC-3oowH06
H:3-154
1g
AIRC-3oowH07
H:3-154
1h
AIRC-3oowH08
H:3-154
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Asym.Unit (426 KB)
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