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3OOR
Asym. Unit
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Asym.Unit (128 KB)
Biol.Unit 1 (123 KB)
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(1)
Title
:
I-SCEI MUTANT (K86R/G100T)COMPLEXED WITH C/G+4 DNA SUBSTRATE
Authors
:
R. Joshi, J-H. Chen, B. L. Golden, F. S. Gimble
Date
:
31 Aug 10 (Deposition) - 17 Nov 10 (Release) - 12 Jan 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.50
Chains
:
Asym. Unit : A,C,D
Biol. Unit 1: A,C,D (1x)
Keywords
:
Homing Endonuclease, Intron Homing, Laglidadg, Hydrolase-Dna Complex, I-Scei Mutant (K86R/G100T)
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
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Reference
:
R. Joshi, K. K. Ho, K. Tenney, J. H. Chen, B. L. Golden, F. S. Gimble
Evolution Of I-Scei Homing Endonucleases With Increased Dna Recognition Site Specificity.
J. Mol. Biol. V. 405 185 2011
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Hetero Components
(1, 3)
Info
All Hetero Components
1a: CALCIUM ION (CAa)
1b: CALCIUM ION (CAb)
1c: CALCIUM ION (CAc)
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No.
Name
Count
Type
Full Name
1
CA
3
Ligand/Ion
CALCIUM ION
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Sites
(3, 3)
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1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
ASP A:44 , ASP A:144 , DA C:14 , DC D:17
BINDING SITE FOR RESIDUE CA A 236
2
AC2
SOFTWARE
GLY A:43 , ASP A:44 , ASP A:145 , DC C:15 , DC D:17
BINDING SITE FOR RESIDUE CA A 237
3
AC3
SOFTWARE
DC C:15 , HOH C:28 , DA D:15 , DT D:16 , HOH D:27
BINDING SITE FOR RESIDUE CA D 26
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PROSITE Patterns/Profiles
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Exons
(1, 1)
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Exon 1.1 (A:3-225)
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1: Boundary -/1.1
2: Boundary 1.1/-
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1
Q0160
1
Q0160.1
Mito:61022-61729
708
SCE1_YEAST
1-235
235
1
A:3-225
223
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SCOP Domains
(1, 2)
Info
All SCOP Domains
1a: SCOP_d3oora1 (A:3-120)
1b: SCOP_d3oora2 (A:121-225)
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Protein Domains
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Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
Homing endonuclease-like
(42)
Superfamily
:
Homing endonucleases
(38)
Family
:
Group I mobile intron endonuclease
(29)
Protein domain
:
automated matches
(12)
Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
(2)
1a
d3oora1
A:3-120
1b
d3oora2
A:121-225
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CATH Domains
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Pfam Domains
(1, 1)
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1a: PFAM_LAGLIDADG_2_3oorA01 (A:33-209)
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Clan
:
Homing_endonuc
(19)
Family
:
LAGLIDADG_2
(3)
Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Bakers yeast)
(3)
1a
LAGLIDADG_2-3oorA01
A:33-209
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Asymmetric Unit 1
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