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Biol. Unit 1
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Asym.Unit (126 KB)
Biol.Unit 1 (121 KB)
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(1)
Title
:
I-SCEI COMPLEXED WITH C/G+4 DNA SUBSTRATE
Authors
:
R. Joshi, J-H. Chen, B. L. Golden, F. S. Gimble
Date
:
31 Aug 10 (Deposition) - 17 Nov 10 (Release) - 12 Jan 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.30
Chains
:
Asym. Unit : A,C,D
Biol. Unit 1: A,C,D (1x)
Keywords
:
Homing Endonuclease, Intron Homing, Laglidadg, Hydrolase-Dna Complex
(Keyword Search:
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)
Reference
:
R. Joshi, K. K. Ho, K. Tenney, J. H. Chen, B. L. Golden, F. S. Gimble
Evolution Of I-Scei Homing Endonucleases With Increased Dna Recognition Site Specificity.
J. Mol. Biol. V. 405 185 2011
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Hetero Components
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1a: CALCIUM ION (CAa)
1b: CALCIUM ION (CAb)
1c: CALCIUM ION (CAc)
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Sites
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2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
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Name
Evidence
Residues
Description
1
AC1
SOFTWARE
ASP A:44 , ASP A:144 , HOH A:243 , DA C:14 , DC D:17
BINDING SITE FOR RESIDUE CA A 236
2
AC2
SOFTWARE
GLY A:43 , ASP A:44 , ASP A:145 , HOH A:253 , DC C:15 , HOH D:31
BINDING SITE FOR RESIDUE CA A 237
3
AC3
SOFTWARE
DC C:15 , HOH C:31 , HOH C:33 , DT D:16 , HOH D:29
BINDING SITE FOR RESIDUE CA C 26
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Exons
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SCOP Domains
(1, 2)
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All SCOP Domains
1a: SCOP_d3oola1 (A:3-120)
1b: SCOP_d3oola2 (A:121-225)
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Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
Homing endonuclease-like
(42)
Superfamily
:
Homing endonucleases
(38)
Family
:
Group I mobile intron endonuclease
(29)
Protein domain
:
automated matches
(12)
Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
(2)
1a
d3oola1
A:3-120
1b
d3oola2
A:121-225
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CATH Domains
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Pfam Domains
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1a: PFAM_LAGLIDADG_2_3oolA01 (A:33-209)
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Clan
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Homing_endonuc
(19)
Family
:
LAGLIDADG_2
(3)
Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Bakers yeast)
(3)
1a
LAGLIDADG_2-3oolA01
A:33-209
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Asymmetric Unit 1
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Asym.Unit (126 KB)
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