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3OJB
Asym. Unit
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Asym.Unit (180 KB)
Biol.Unit 1 (45 KB)
Biol.Unit 2 (45 KB)
Biol.Unit 3 (46 KB)
Biol.Unit 4 (45 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF C-TERMINAL DOMAIN OF HUMAN GALECTIN-8
Authors
:
D. Zhou, M. Teng, L. Niu
Date
:
21 Aug 10 (Deposition) - 07 Sep 11 (Release) - 07 Sep 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
3.01
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Biol. Unit 3: C (1x)
Biol. Unit 4: D (1x)
Keywords
:
Jelly-Roll, Sugar Binding Protein, Carbohydrate/Sugar Binding
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
D. Zhou, M. Teng, L. Niu
Crystal Structure Of C-Terminal Carbohydrate Recognition Domain Of Human Galectin-8
To Be Published
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Hetero Components
(0, 0)
Info
All Hetero Components
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Sites
(0, 0)
Info
All Sites
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
(1, 4)
Info
All PROSITE Patterns/Profiles
1: GALECTIN (-|A:11-139,B:11-139,C:11-139,D:11-...)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
GALECTIN
PS51304
Galactoside-binding lectin (galectin) domain profile.
LEG8_HUMAN
19-152
187-317
4
-
A:11-139
B:11-139
C:11-139
D:11-139
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Exons
(3, 12)
Info
All Exons
Exon 1.11r (A:9-37 | B:9-37 | C:9-37 | D:9-37)
Exon 1.12c (A:37-92 | B:37-92 | C:37-92 | D:37...)
Exon 1.14j (A:93-139 | B:93-139 | C:93-139 | D...)
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All Exon Boundaries
1: Boundary 1.11c/1.11r
2: Boundary 1.11r/1.12c
3: Boundary 1.12c/1.14j
4: Boundary 1.14j/-
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.3c
ENST00000366584
3c
ENSE00001381502
chr1:
236686899-236687361
463
LEG8_HUMAN
-
0
0
-
-
1.6a
ENST00000366584
6a
ENSE00002193374
chr1:
236689268-236689415
148
LEG8_HUMAN
1-15
15
0
-
-
1.7b
ENST00000366584
7b
ENSE00002141991
chr1:
236700797-236700885
89
LEG8_HUMAN
16-45
30
0
-
-
1.8b
ENST00000366584
8b
ENSE00000793501
chr1:
236702179-236702389
211
LEG8_HUMAN
45-115
71
0
-
-
1.9b
ENST00000366584
9b
ENSE00000805377
chr1:
236703864-236703983
120
LEG8_HUMAN
116-155
40
0
-
-
1.10e
ENST00000366584
10e
ENSE00000793503
chr1:
236704954-236705010
57
LEG8_HUMAN
156-174
19
0
-
-
1.11c
ENST00000366584
11c
ENSE00001226656
chr1:
236706061-236706087
27
LEG8_HUMAN
175-183
9
0
-
-
1.11r
ENST00000366584
11r
ENSE00002191373
chr1:
236706860-236706948
89
LEG8_HUMAN
184-213
30
4
A:9-37
B:9-37
C:9-37
D:9-37
29
29
29
29
1.12c
ENST00000366584
12c
ENSE00000805385
chr1:
236708050-236708215
166
LEG8_HUMAN
213-268
56
4
A:37-92
B:37-92
C:37-92
D:37-92
56
56
56
56
1.14j
ENST00000366584
14j
ENSE00001911385
chr1:
236711312-236714310
2999
LEG8_HUMAN
269-317
49
4
A:93-139
B:93-139
C:93-139
D:93-139
47
47
47
47
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SCOP Domains
(1, 4)
Info
All SCOP Domains
1a: SCOP_d3ojba_ (A:)
1b: SCOP_d3ojbb_ (B:)
1c: SCOP_d3ojbc_ (C:)
1d: SCOP_d3ojbd_ (D:)
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Class
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All beta proteins
(24004)
Fold
:
Concanavalin A-like lectins/glucanases
(797)
Superfamily
:
Concanavalin A-like lectins/glucanases
(797)
Family
:
automated matches
(133)
Protein domain
:
automated matches
(133)
Human (Homo sapiens) [TaxId: 9606]
(36)
1a
d3ojba_
A:
1b
d3ojbb_
B:
1c
d3ojbc_
C:
1d
d3ojbd_
D:
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CATH Domains
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Pfam Domains
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Asym.Unit (180 KB)
Header - Asym.Unit
Biol.Unit 1 (45 KB)
Header - Biol.Unit 1
Biol.Unit 2 (45 KB)
Header - Biol.Unit 2
Biol.Unit 3 (46 KB)
Header - Biol.Unit 3
Biol.Unit 4 (45 KB)
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