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Biol. Unit 1
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Asym.Unit (352 KB)
Biol.Unit 1 (173 KB)
Biol.Unit 2 (174 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF TYPE I 3-DEHYDROQUINATE DEHYDRATASE (AROD) FROM SALMONELLA TYPHIMURIUM WITH CLOSE LOOP CONFORMATION.
Authors
:
G. Minasov, S. H. Light, L. Shuvalova, L. Papazisi, W. F. Anderson, Cent Structural Genomics Of Infectious Diseases (Csgid)
Date
:
13 Aug 10 (Deposition) - 01 Sep 10 (Release) - 04 May 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.90
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A,B (1x)
Biol. Unit 2: C,D (1x)
Keywords
:
Structural Genomics, Center For Structural Genomics Of Infectious Diseases, Csgid, Tim Barrel, Lyase
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Reference
:
S. H. Light, G. Minasov, L. Shuvalova, S. N. Peterson, M. Caffrey, W. F. Anderson, A. Lavie
A Conserved Surface Loop In Type I Dehydroquinate Dehydratases Positions An Active Site Arginine And Function In Substrate Binding.
Biochemistry V. 50 2357 2011
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Hetero Components
(0, 0)
Info
All Hetero Components
1a: CHLORIDE ION (CLa)
1b: CHLORIDE ION (CLb)
1c: CHLORIDE ION (CLc)
1d: CHLORIDE ION (CLd)
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Sites
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1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
ARG A:213 , ALA A:233 , GLN A:236 , HOH A:354
BINDING SITE FOR RESIDUE CL A 253
2
AC2
SOFTWARE
ARG B:213 , ALA B:233 , GLN B:236
BINDING SITE FOR RESIDUE CL B 253
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PROSITE Patterns/Profiles
(1, 2)
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1: DEHYDROQUINASE_I (A:114-144,B:114-144)
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
DEHYDROQUINASE_I
PS01028
Dehydroquinase class I active site.
AROD_SALTY
114-144
2
A:114-144
B:114-144
-
-
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Exons
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SCOP Domains
(1, 4)
Info
All SCOP Domains
1a: SCOP_d3oexa_ (A:)
1b: SCOP_d3oexb_ (B:)
1c: SCOP_d3oexc_ (C:)
1d: SCOP_d3oexd_ (D:)
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Class
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Alpha and beta proteins (a/b)
(23833)
Fold
:
TIM beta/alpha-barrel
(3956)
Superfamily
:
Aldolase
(457)
Family
:
Class I aldolase
(182)
Protein domain
:
automated matches
(54)
Salmonella typhimurium [TaxId: 90371]
(5)
1a
d3oexa_
A:
1b
d3oexb_
B:
1c
d3oexc_
C:
1d
d3oexd_
D:
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Pfam Domains
(1, 4)
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all PFAM domains
1a: PFAM_DHquinase_I_3oexD01 (D:19-247)
1b: PFAM_DHquinase_I_3oexD02 (D:19-247)
1c: PFAM_DHquinase_I_3oexD03 (D:19-247)
1d: PFAM_DHquinase_I_3oexD04 (D:19-247)
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Clan
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TIM_barrel
(694)
Family
:
DHquinase_I
(17)
Salmonella typhimurium
(7)
1a
DHquinase_I-3oexD01
D:19-247
1b
DHquinase_I-3oexD02
D:19-247
1c
DHquinase_I-3oexD03
D:19-247
1d
DHquinase_I-3oexD04
D:19-247
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Asym.Unit (352 KB)
Header - Asym.Unit
Biol.Unit 1 (173 KB)
Header - Biol.Unit 1
Biol.Unit 2 (174 KB)
Header - Biol.Unit 2
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