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3OE4
Asym. Unit
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Asym.Unit (45 KB)
Biol.Unit 1 (40 KB)
Biol.Unit 2 (78 KB)
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(1)
Title
:
RAT CATECHOL O-METHYLTRANSFERASE IN COMPLEX WITH A CATECHOL-TYPE, PURINE-CONTAINING BISUBSTRATE INHIBITOR - HUMANIZED FORM
Authors
:
A. Ehler, D. Schlatter, M. Stihle, J. Benz, M. G. Rudolph
Date
:
12 Aug 10 (Deposition) - 16 Mar 11 (Release) - 15 Aug 12 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.49
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Biol. Unit 2: A (2x)
Keywords
:
Methyltransferase, Neurotransmitter Degradation, Alternative Initiation, Catecholamine Metabolism, Cell Membrane, Magnesium, Membrane, Metal-Binding, Phosphoprotein, S-Adenosyl-L-Methionine, Signal-Anchor, Transferase, Transmembrane, Transferase-Transferase Inhibitor Complex
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
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Reference
:
M. Ellermann, R. Paulini, R. Jakob-Roetne, C. Lerner, E. Borroni, D. Roth, A. Ehler, W. B. Schweizer, D. Schlatter, M. G. Rudolph, F. Diederich
Molecular Recognition At The Active Site Of Catechol-O-Methyltransferase (Comt): Adenine Replacements I Bisubstrate Inhibitors
Chemistry V. 17 6369 2011
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Hetero Components
(2, 2)
Info
All Hetero Components
1a: N-[(E)-3-[(2R,3S,4R,5R)-3,4-DIHYDR... (610a)
2a: MAGNESIUM ION (MGa)
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No.
Name
Count
Type
Full Name
1
610
1
Ligand/Ion
N-[(E)-3-[(2R,3S,4R,5R)-3,4-DIHYDROXY-5-PURIN-9-YL-OXOLAN-2-YL]PROP-2-ENYL]-2,3-DIHYDROXY-5-NITRO-BENZAMIDE
2
MG
1
Ligand/Ion
MAGNESIUM ION
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Sites
(2, 2)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
ASP A:141 , ASP A:169 , ASN A:170 , 610 A:223 , HOH A:236
BINDING SITE FOR RESIDUE MG A 222
2
AC2
SOFTWARE
TRP A:38 , MET A:40 , GLY A:66 , TYR A:68 , GLU A:90 , ILE A:91 , GLY A:117 , ALA A:118 , SER A:119 , ASP A:141 , HIS A:142 , TRP A:143 , LYS A:144 , ASP A:169 , ASN A:170 , PRO A:174 , GLU A:199 , MG A:222 , HOH A:236
BINDING SITE FOR RESIDUE 610 A 223
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are not available)
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PROSITE Patterns/Profiles
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Exons
(4, 4)
Info
All Exons
Exon 1.2 (A:3-47)
Exon 1.3 (A:47-111)
Exon 1.4 (A:112-155)
Exon 1.5 (A:156-215)
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All Exon Boundaries
1: Boundary 1.1/1.2
2: Boundary 1.2/1.3
3: Boundary 1.3/1.4
4: Boundary 1.4/1.5
5: Boundary 1.5/-
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1
ENSRNOT00000050269
1
ENSRNOE00000455167
chr11:
84561591-84561757
167
COMT_RAT
-
0
0
-
-
1.2
ENSRNOT00000050269
2
ENSRNOE00000018229
chr11:
84576767-84577034
268
COMT_RAT
1-90
90
1
A:3-47
45
1.3
ENSRNOT00000050269
3
ENSRNOE00000018230
chr11:
84577399-84577592
194
COMT_RAT
90-154
65
1
A:47-111
65
1.4
ENSRNOT00000050269
4
ENSRNOE00000018231
chr11:
84577902-84578033
132
COMT_RAT
155-198
44
1
A:112-155
44
1.5
ENSRNOT00000050269
5
ENSRNOE00000317236
chr11:
84580831-84581705
875
COMT_RAT
199-264
66
1
A:156-215
60
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SCOP Domains
(1, 1)
Info
All SCOP Domains
1a: SCOP_d3oe4a_ (A:)
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Protein Domains
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(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
S-adenosyl-L-methionine-dependent methyltransferases
(533)
Superfamily
:
S-adenosyl-L-methionine-dependent methyltransferases
(533)
Family
:
COMT-like
(31)
Protein domain
:
automated matches
(25)
Norway rat (Rattus norvegicus) [TaxId: 10116]
(20)
1a
d3oe4a_
A:
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CATH Domains
(0, 0)
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Pfam Domains
(1, 1)
Info
all PFAM domains
1a: PFAM_Methyltransf_3_3oe4A01 (A:19-181)
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Clan
:
NADP_Rossmann
(1239)
Family
:
Methyltransf_3
(13)
Rattus norvegicus (Rat)
(10)
1a
Methyltransf_3-3oe4A01
A:19-181
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Chain A
Asymmetric Unit 1
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Asym.Unit (45 KB)
Header - Asym.Unit
Biol.Unit 1 (40 KB)
Header - Biol.Unit 1
Biol.Unit 2 (78 KB)
Header - Biol.Unit 2
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