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Getting 'Exon' information from database.
3OCG
Asym. Unit
Info
Asym.Unit (64 KB)
Biol.Unit 1 (60 KB)
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(1)
Title
:
P38 ALPHA KINASE COMPLEXED WITH A 5-AMINO-PYRAZOLE BASED INHIBITOR
Authors
:
J. S. Sack
Date
:
10 Aug 10 (Deposition) - 17 Nov 10 (Release) - 17 Nov 10 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.21
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
P38 Map Kinase, Serine/Threonine-Protine Kinase, Transferase, Transferase-Transferase Inhibitor Complex
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
J. Das, R. V. Moquin, A. J. Dyckman, T. Li, S. Pitt, R. Zhang, D. R. Shen, K. W. Mcintyre, K. Gillooly, A. M. Doweyko, J. A. Newitt, J. S. Sack, H. Zhang, S. E. Kiefer, K. Kish, M. Mckinnon, J. C. Barrish, J. H. Dodd, G. L. Schieven, K. Leftheris
5-Amino-Pyrazoles As Potent And Selective P38α Inhibitors
Bioorg. Med. Chem. Lett. V. 20 6886 2010
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Hetero Components
(1, 1)
Info
All Hetero Components
1a: 5-AMINO-N-[5-(ISOXAZOL-3-YLCARBAMO... (OCGa)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
OCG
1
Ligand/Ion
5-AMINO-N-[5-(ISOXAZOL-3-YLCARBAMOYL)-2-METHYLPHENYL]-1-PHENYL-1H-PYRAZOLE-4-CARBOXAMIDE
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Sites
(1, 1)
Info
All Sites
1: AC1 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
ALA A:51 , LYS A:53 , GLU A:71 , LEU A:75 , ILE A:84 , LEU A:104 , THR A:106 , HIS A:107 , MET A:109 , LEU A:167 , ASP A:168 , PHE A:169 , LEU A:171 , HOH A:407
BINDING SITE FOR RESIDUE OCG A 361
[
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SAPs(SNPs)/Variants
(3, 3)
Info
(mutated residues are not available)
All SNPs/Variants
1: VAR_042270 (A51V, chain A, )
2: VAR_042271 (P322R, chain A, )
3: VAR_042272 (D343G, chain A, )
View:
Select:
Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_042270
A
51
V
MK14_HUMAN
Unclassified
---
A
A
51
V
2
UniProt
VAR_042271
P
322
R
MK14_HUMAN
Unclassified
---
A
P
322
R
3
UniProt
VAR_042272
D
343
G
MK14_HUMAN
Polymorphism
45496794
A
D
343
G
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(2, 2)
Info
All PROSITE Patterns/Profiles
1: PROTEIN_KINASE_ATP (A:30-54)
2: MAPK (A:59-162)
;
View:
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Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
PROTEIN_KINASE_ATP
PS00107
Protein kinases ATP-binding region signature.
MK14_HUMAN
30-54
1
A:30-54
2
MAPK
PS01351
MAP kinase signature.
MK14_HUMAN
59-162
1
A:59-162
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Exons
(12, 12)
Info
All Exons
Exon 1.1b (A:4-39)
Exon 1.3 (A:39-82)
Exon 1.4 (A:83-102)
Exon 1.5 (A:102-139)
Exon 1.7 (A:140-149)
Exon 1.8 (A:150-165)
Exon 1.9b (A:166-204 (gaps))
Exon 1.10b (A:204-228)
Exon 1.11a (A:228-254)
Exon 1.13 (A:255-281)
Exon 1.14b (A:281-339)
Exon 1.15c (A:339-352)
View:
Select:
Label:
All Exon Boundaries
01: Boundary -/1.1b
02: Boundary 1.1b/1.3
03: Boundary 1.3/1.4
04: Boundary 1.4/1.5
05: Boundary 1.5/1.7
06: Boundary 1.7/1.8
07: Boundary 1.8/1.9b
08: Boundary 1.9b/1.10b
09: Boundary 1.10b/1.11a
10: Boundary 1.11a/1.13
11: Boundary 1.13/1.14b
12: Boundary 1.14b/1.15c
13: Boundary 1.15c/-
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1b
ENST00000229794
1b
ENSE00001809695
chr6:
35995547-35996050
504
MK14_HUMAN
1-39
39
1
A:4-39
36
1.3
ENST00000229794
3
ENSE00002157398
chr6:
36020476-36020605
130
MK14_HUMAN
39-82
44
1
A:39-82
44
1.4
ENST00000229794
4
ENSE00002195466
chr6:
36027066-36027124
59
MK14_HUMAN
83-102
20
1
A:83-102
20
1.5
ENST00000229794
5
ENSE00002173328
chr6:
36040650-36040761
112
MK14_HUMAN
102-139
38
1
A:102-139
38
1.7
ENST00000229794
7
ENSE00002199098
chr6:
36041468-36041497
30
MK14_HUMAN
140-149
10
1
A:140-149
10
1.8
ENST00000229794
8
ENSE00002174022
chr6:
36041826-36041873
48
MK14_HUMAN
150-165
16
1
A:150-165
16
1.9b
ENST00000229794
9b
ENSE00002154502
chr6:
36043625-36043739
115
MK14_HUMAN
166-204
39
1
A:166-204 (gaps)
39
1.10b
ENST00000229794
10b
ENSE00002189763
chr6:
36044314-36044385
72
MK14_HUMAN
204-228
25
1
A:204-228
25
1.11a
ENST00000229794
11a
ENSE00002184355
chr6:
36063764-36063843
80
MK14_HUMAN
228-254
27
1
A:228-254
27
1.13
ENST00000229794
13
ENSE00002147851
chr6:
36070348-36070426
79
MK14_HUMAN
255-281
27
1
A:255-281
27
1.14b
ENST00000229794
14b
ENSE00002152484
chr6:
36075232-36075405
174
MK14_HUMAN
281-339
59
1
A:281-339
59
1.15c
ENST00000229794
15c
ENSE00001919602
chr6:
36076157-36078532
2376
MK14_HUMAN
339-360
22
1
A:339-352
14
[
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SCOP Domains
(1, 1)
Info
All SCOP Domains
1a: SCOP_d3ocga_ (A:)
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Classes
(
)
(
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)
(
)
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)
(
)
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)
(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
Protein kinase-like (PK-like)
(2589)
Superfamily
:
Protein kinase-like (PK-like)
(2589)
Family
:
Protein kinases, catalytic subunit
(1977)
Protein domain
:
MAP kinase p38
(184)
Human (Homo sapiens) [TaxId: 9606]
(162)
1a
d3ocga_
A:
[
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CATH Domains
(0, 0)
Info
all CATH domains
View:
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Sorry, no Info available
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Pfam Domains
(1, 1)
Info
all PFAM domains
1a: PFAM_Pkinase_3ocgA01 (A:24-308)
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Clans
(
)
(
)
Families
(
)
(
)
Organisms
(
)
(
)
Clan
:
PKinase
(934)
Family
:
Pkinase
(680)
Homo sapiens (Human)
(521)
1a
Pkinase-3ocgA01
A:24-308
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Chain A
Asymmetric Unit 1
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