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3O9M
Asym. Unit
Info
Asym.Unit (176 KB)
Biol.Unit 1 (337 KB)
Biol.Unit 2 (338 KB)
Biol.Unit 3 (671 KB)
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(1)
Title
:
CO-CRYSTALLIZATION STUDIES OF FULL LENGTH RECOMBINANT BCHE WITH COCAINE OFFERS INSIGHTS INTO COCAINE DETOXIFICATION
Authors
:
O. A. Asojo, M. N. Ngamelue, K. Homma, O. Lockridge
Date
:
04 Aug 10 (Deposition) - 13 Apr 11 (Release) - 11 May 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.98
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A (4x)
Biol. Unit 2: B (4x)
Biol. Unit 3: A,B (4x)
Keywords
:
Cholinesterase, Hydrolase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
O. A. Asojo, M. N. Ngamelue, K. Homma, O. Lockridge
Cocrystallization Studies Of Full-Length Recombinant Butyrylcholinesterase (Bche) With Cocaine.
Acta Crystallogr. , Sect. F V. 67 434 2011
[
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Hetero Components
(1, 2)
Info
All Hetero Components
1a: BENZOIC ACID (BEZa)
1b: BENZOIC ACID (BEZb)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
BEZ
2
Ligand/Ion
BENZOIC ACID
[
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]
Sites
(2, 2)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
GLY A:116 , GLY A:117 , SER A:198 , LEU A:286 , HIS A:438
BINDING SITE FOR RESIDUE BEZ A 999
2
AC2
SOFTWARE
GLY B:116 , GLY B:117 , SER B:198 , HIS B:438
BINDING SITE FOR RESIDUE BEZ B 999
[
close Site info
]
SAPs(SNPs)/Variants
(42, 84)
Info
(mutated residues are not available)
All SNPs/Variants
01: VAR_072094 (K12R, chain A/B, )
02: VAR_040012 (T24M, chain A/B, )
03: VAR_040013 (F28I, chain A/B, )
04: VAR_040014 (Y33C, chain A/B, )
05: VAR_072730 (A34V, chain A/B, )
06: VAR_040015 (P37S, chain A/B, )
07: VAR_002360 (D70G, chain A/B, )
08: VAR_040016 (D70H, chain A/B, )
09: VAR_072095 (G75R, chain A/B, )
10: VAR_072096 (E90D, chain A/B, )
11: VAR_040017 (N96Y, chain A/B, )
12: VAR_072097 (I99M, chain A/B, )
13: VAR_040018 (P100S, chain A/B, )
14: VAR_040019 (G115D, chain A/B, )
15: VAR_040020 (L125F, chain A/B, )
16: VAR_040021 (Y128C, chain A/B, )
17: VAR_040022 (V142M, chain A/B, )
18: VAR_040023 (D170E, chain A/B, )
19: VAR_040024 (S198G, chain A/B, )
20: VAR_040025 (A199V, chain A/B, )
21: VAR_040026 (A201T, chain A/B, )
22: VAR_072098 (V204D, chain A/B, )
23: VAR_040027 (T243M, chain A/B, )
24: VAR_040028 (T250P, chain A/B, )
25: VAR_040029 (E255D, chain A/B, )
26: VAR_040030 (K267R, chain A/B, )
27: VAR_072099 (V294M, chain A/B, )
28: VAR_040031 (L307P, chain A/B, )
29: VAR_040032 (A328D, chain A/B, )
30: VAR_002362 (L330I, chain A/B, )
31: VAR_072100 (G333C, chain A/B, )
32: VAR_040033 (G365R, chain A/B, )
33: VAR_040034 (R386C, chain A/B, )
34: VAR_040035 (G390V, chain A/B, )
35: VAR_040036 (F418S, chain A/B, )
36: VAR_040037 (E460K, chain A/B, )
37: VAR_072101 (R470W, chain A/B, )
38: VAR_040038 (W471R, chain A/B, )
39: VAR_040039 (F474L, chain A/B, )
40: VAR_040040 (E497V, chain A/B, )
41: VAR_040041 (R515C, chain A/B, )
42: VAR_040042 (Q518L, chain A/B, )
View:
Select:
Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
01
UniProt
VAR_072094
K
40
R
CHLE_HUMAN
Polymorphism
116047990
A/B
K
12
R
02
UniProt
VAR_040012
T
52
M
CHLE_HUMAN
Disease (BChE deficiency)
56309853
A/B
T
24
M
03
UniProt
VAR_040013
F
56
I
CHLE_HUMAN
Disease (BChE deficiency)
---
A/B
F
28
I
04
UniProt
VAR_040014
Y
61
C
CHLE_HUMAN
Disease (BChE deficiency)
---
A/B
Y
33
C
05
UniProt
VAR_072730
A
62
V
CHLE_HUMAN
Disease (BChE deficiency)
---
A/B
A
34
V
06
UniProt
VAR_040015
P
65
S
CHLE_HUMAN
Disease (BChE deficiency)
---
A/B
P
37
S
07
UniProt
VAR_002360
D
98
G
CHLE_HUMAN
Disease (BChE deficiency)
1799807
A/B
D
70
G
08
UniProt
VAR_040016
D
98
H
CHLE_HUMAN
Disease (BChE deficiency)
---
A/B
D
70
H
09
UniProt
VAR_072095
G
103
R
CHLE_HUMAN
Disease (BChE deficiency)
---
A/B
G
75
R
10
UniProt
VAR_072096
E
118
D
CHLE_HUMAN
Disease (BChE deficiency)
---
A/B
E
90
D
11
UniProt
VAR_040017
N
124
Y
CHLE_HUMAN
Disease (BChE deficiency)
---
A/B
N
96
Y
12
UniProt
VAR_072097
I
127
M
CHLE_HUMAN
Polymorphism
---
A/B
I
99
M
13
UniProt
VAR_040018
P
128
S
CHLE_HUMAN
Disease (BChE deficiency)
3732880
A/B
P
100
S
14
UniProt
VAR_040019
G
143
D
CHLE_HUMAN
Disease (BChE deficiency)
---
A/B
G
115
D
15
UniProt
VAR_040020
L
153
F
CHLE_HUMAN
Disease (BChE deficiency)
---
A/B
L
125
F
16
UniProt
VAR_040021
Y
156
C
CHLE_HUMAN
Disease (BChE deficiency)
---
A/B
Y
128
C
17
UniProt
VAR_040022
V
170
M
CHLE_HUMAN
Disease (BChE deficiency)
---
A/B
V
142
M
18
UniProt
VAR_040023
D
198
E
CHLE_HUMAN
Disease (BChE deficiency)
---
A/B
D
170
E
19
UniProt
VAR_040024
S
226
G
CHLE_HUMAN
Disease (BChE deficiency)
---
A/B
S
198
G
20
UniProt
VAR_040025
A
227
V
CHLE_HUMAN
Disease (BChE deficiency)
---
A/B
A
199
V
21
UniProt
VAR_040026
A
229
T
CHLE_HUMAN
Disease (BChE deficiency)
---
A/B
A
201
T
22
UniProt
VAR_072098
V
232
D
CHLE_HUMAN
Disease (BChE deficiency)
---
A/B
V
204
D
23
UniProt
VAR_040027
T
271
M
CHLE_HUMAN
Disease (BChE deficiency)
28933389
A/B
T
243
M
24
UniProt
VAR_040028
T
278
P
CHLE_HUMAN
Disease (BChE deficiency)
---
A/B
T
250
P
25
UniProt
VAR_040029
E
283
D
CHLE_HUMAN
Polymorphism
16849700
A/B
E
255
D
26
UniProt
VAR_040030
K
295
R
CHLE_HUMAN
Disease (BChE deficiency)
115624085
A/B
K
267
R
27
UniProt
VAR_072099
V
322
M
CHLE_HUMAN
Polymorphism
---
A/B
V
294
M
28
UniProt
VAR_040031
L
335
P
CHLE_HUMAN
Disease (BChE deficiency)
---
A/B
L
307
P
29
UniProt
VAR_040032
A
356
D
CHLE_HUMAN
Disease (BChE deficiency)
---
A/B
A
328
D
30
UniProt
VAR_002362
L
358
I
CHLE_HUMAN
Disease (BChE deficiency)
121918557
A/B
L
330
I
31
UniProt
VAR_072100
G
361
C
CHLE_HUMAN
Disease (BChE deficiency)
---
A/B
G
333
C
32
UniProt
VAR_040033
G
393
R
CHLE_HUMAN
Disease (BChE deficiency)
115129687
A/B
G
365
R
33
UniProt
VAR_040034
R
414
C
CHLE_HUMAN
Disease (BChE deficiency)
---
A/B
R
386
C
34
UniProt
VAR_040035
G
418
V
CHLE_HUMAN
Disease (BChE deficiency)
28933390
A/B
G
390
V
35
UniProt
VAR_040036
F
446
S
CHLE_HUMAN
Disease (BChE deficiency)
---
A/B
F
418
S
36
UniProt
VAR_040037
E
488
K
CHLE_HUMAN
Disease (BChE deficiency)
---
A/B
E
460
K
37
UniProt
VAR_072101
R
498
W
CHLE_HUMAN
Polymorphism
115017300
A/B
R
470
W
38
UniProt
VAR_040038
W
499
R
CHLE_HUMAN
Disease (BChE deficiency)
---
A/B
W
471
R
39
UniProt
VAR_040039
F
502
L
CHLE_HUMAN
Disease (BChE deficiency)
---
A/B
F
474
L
40
UniProt
VAR_040040
E
525
V
CHLE_HUMAN
Disease (BChE deficiency)
---
A/B
E
497
V
41
UniProt
VAR_040041
R
543
C
CHLE_HUMAN
Disease (BChE deficiency)
---
A/B
R
515
C
42
UniProt
VAR_040042
Q
546
L
CHLE_HUMAN
Disease (BChE deficiency)
---
A/B
Q
518
L
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
[
close SNP/Variant info
]
PROSITE Patterns/Profiles
(2, 4)
Info
All PROSITE Patterns/Profiles
1: CARBOXYLESTERASE_B_2 (A:90-100,B:90-100)
2: CARBOXYLESTERASE_B_1 (A:185-200,B:185-200)
;
View:
Select:
Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
CARBOXYLESTERASE_B_2
PS00941
Carboxylesterases type-B signature 2.
CHLE_HUMAN
118-128
2
A:90-100
B:90-100
2
CARBOXYLESTERASE_B_1
PS00122
Carboxylesterases type-B serine active site.
CHLE_HUMAN
213-228
2
A:185-200
B:185-200
[
close PROSITE info
]
Exons
(3, 6)
Info
All Exons
Exon 1.2 (A:4-478 | B:4-478)
Exon 1.4 (A:478-534 | B:478-534)
Exon 1.7c (A:534-534 | B:534-534)
View:
Select:
Label:
All Exon Boundaries
1: Boundary 1.1a/1.2
2: Boundary 1.2/1.4
3: Boundary 1.4/1.7c
4: Boundary 1.7c/-
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1a
ENST00000264381
1a
ENSE00001954521
chr3:
165555260-165555102
159
CHLE_HUMAN
-
0
0
-
-
1.2
ENST00000264381
2
ENSE00000826111
chr3:
165548829-165547305
1525
CHLE_HUMAN
1-506
506
2
A:4-478
B:4-478
475
475
1.4
ENST00000264381
4
ENSE00000780132
chr3:
165504099-165503933
167
CHLE_HUMAN
506-562
57
2
A:478-534
B:478-534
57
57
1.7c
ENST00000264381
7c
ENSE00001810445
chr3:
165491294-165490692
603
CHLE_HUMAN
562-602
41
2
A:534-534
B:534-534
1
1
[
close EXON info
]
SCOP Domains
(1, 2)
Info
All SCOP Domains
1a: SCOP_d3o9ma_ (A:)
1b: SCOP_d3o9mb_ (B:)
View:
Select:
Label:
Classes
(
)
(
)
Folds
(
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(
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(
)
(
)
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(
)
(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
alpha/beta-Hydrolases
(971)
Superfamily
:
alpha/beta-Hydrolases
(971)
Family
:
automated matches
(184)
Protein domain
:
automated matches
(184)
Human (Homo sapiens) [TaxId: 9606]
(42)
1a
d3o9ma_
A:
1b
d3o9mb_
B:
[
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CATH Domains
(0, 0)
Info
all CATH domains
View:
Select:
Label:
Sorry, no Info available
[
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Pfam Domains
(1, 2)
Info
all PFAM domains
1a: PFAM_COesterase_3o9mB01 (B:4-522)
1b: PFAM_COesterase_3o9mB02 (B:4-522)
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Clans
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(
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Families
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(
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Organisms
(
)
(
)
Clan
:
AB_hydrolase
(347)
Family
:
COesterase
(79)
Homo sapiens (Human)
(38)
1a
COesterase-3o9mB01
B:4-522
1b
COesterase-3o9mB02
B:4-522
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Asym.Unit (176 KB)
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