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3O1W
Asym. Unit
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Asym.Unit (338 KB)
Biol.Unit 1 (332 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF DIMERIC KLHXK1 IN CRYSTAL FORM III
Authors
:
E. B. Kuettner, K. Kettner, A. Keim, T. M. Kriegel, N. Strater
Date
:
22 Jul 10 (Deposition) - 13 Oct 10 (Release) - 29 Dec 10 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.66
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (1x)
Keywords
:
Rnaseh-Like Fold, Hexokinase, Glycolysis, Glucose Repression, Atp Binding, Mig1 Binding, Transferase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
E. B. Kuettner, K. Kettner, A. Keim, D. I. Svergun, D. Volke, D. Singer, R. Hoffmann, E. C. Muller, A. Otto, T. M. Kriegel, N. Strater
Crystal Structure Of Hexokinase Klhxk1 Of Kluyveromyces Lactis: A Molecular Basis For Understanding The Control Of Yeast Hexokinase Functions Via Covalent Modification And Oligomerization.
J. Biol. Chem. V. 285 41019 2010
(for further references see the
PDB file header
)
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Hetero Components
(3, 13)
Info
All Hetero Components
1a: GLYCEROL (GOLa)
1b: GLYCEROL (GOLb)
1c: GLYCEROL (GOLc)
2a: 2-[N-CYCLOHEXYLAMINO]ETHANE SULFON... (NHEa)
2b: 2-[N-CYCLOHEXYLAMINO]ETHANE SULFON... (NHEb)
2c: 2-[N-CYCLOHEXYLAMINO]ETHANE SULFON... (NHEc)
2d: 2-[N-CYCLOHEXYLAMINO]ETHANE SULFON... (NHEd)
3a: PHOSPHATE ION (PO4a)
3b: PHOSPHATE ION (PO4b)
3c: PHOSPHATE ION (PO4c)
3d: PHOSPHATE ION (PO4d)
3e: PHOSPHATE ION (PO4e)
3f: PHOSPHATE ION (PO4f)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
GOL
3
Ligand/Ion
GLYCEROL
2
NHE
4
Ligand/Ion
2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID
3
PO4
6
Ligand/Ion
PHOSPHATE ION
[
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Sites
(13, 13)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
ASN A:209 , ASP A:210 , THR A:211 , ILE A:230 , GLY A:234 , ASN A:236 , VAL B:2
BINDING SITE FOR RESIDUE GOL A 486
02
AC2
SOFTWARE
LYS A:226 , ASN A:369 , ARG A:406 , GLY A:407 , TYR A:408 , LYS A:409 , THR A:410 , HOH A:842
BINDING SITE FOR RESIDUE NHE A 487
03
AC3
SOFTWARE
PHE A:420 , LYS A:427 , GLU A:428 , MET A:445 , VAL A:453 , ALA A:454 , HOH A:616
BINDING SITE FOR RESIDUE NHE A 488
04
AC4
SOFTWARE
GLY A:232 , THR A:233 , GLY A:417 , SER A:418 , HOH A:597 , ARG B:3
BINDING SITE FOR RESIDUE PO4 A 489
05
AC5
SOFTWARE
THR A:90 , ASN A:91 , LYS A:111 , ARG A:113
BINDING SITE FOR RESIDUE PO4 A 490
06
AC6
SOFTWARE
SER A:292 , PRO A:293 , ARG A:294 , GLN A:298 , LYS A:302 , HOH A:640 , HOH A:854
BINDING SITE FOR RESIDUE PO4 A 491
07
AC7
SOFTWARE
VAL A:2 , ASN B:209 , ASP B:210 , THR B:211 , GLY B:234 , ASN B:236 , HOH B:616
BINDING SITE FOR RESIDUE GOL B 486
08
AC8
SOFTWARE
ASP B:104 , PHE B:105 , GLU B:456 , HOH B:592
BINDING SITE FOR RESIDUE GOL B 487
09
AC9
SOFTWARE
SER B:37 , SER B:38 , GLU B:39 , ARG B:42 , HOH B:584
BINDING SITE FOR RESIDUE NHE B 488
10
BC1
SOFTWARE
ASN A:356 , VAL A:374 , ARG A:377 , HOH A:696 , TYR B:112 , GLU B:136 , HOH B:598 , HOH B:662
BINDING SITE FOR RESIDUE NHE B 489
11
BC2
SOFTWARE
ARG A:3 , GLY B:232 , THR B:233 , GLY B:417 , SER B:418
BINDING SITE FOR RESIDUE PO4 B 490
12
BC3
SOFTWARE
SER B:292 , PRO B:293 , ARG B:294 , GLN B:298 , LYS B:302 , TYR B:308
BINDING SITE FOR RESIDUE PO4 B 491
13
BC4
SOFTWARE
PHE B:420 , LYS B:427 , VAL B:453 , ALA B:454 , HOH B:837
BINDING SITE FOR RESIDUE PO4 B 492
[
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
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Sorry, no Info available
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PROSITE Patterns/Profiles
(2, 4)
Info
All PROSITE Patterns/Profiles
1: HEXOKINASE_2 (A:21-468,B:21-468)
2: HEXOKINASE_1 (A:152-177,B:152-177)
;
View:
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
HEXOKINASE_2
PS51748
Hexokinase domain profile.
HXK_KLULA
21-468
2
A:21-468
B:21-468
2
HEXOKINASE_1
PS00378
Hexokinase domain signature.
HXK_KLULA
152-177
2
A:152-177
B:152-177
[
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Exons
(0, 0)
Info
All Exons
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 4)
Info
All SCOP Domains
1a: SCOP_d3o1wa1 (A:2-223)
1b: SCOP_d3o1wa2 (A:224-485)
1c: SCOP_d3o1wb1 (B:2-223)
1d: SCOP_d3o1wb2 (B:224-485)
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Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
Ribonuclease H-like motif
(1424)
Superfamily
:
Actin-like ATPase domain
(426)
Family
:
automated matches
(111)
Protein domain
:
automated matches
(111)
Milk yeast (Kluyveromyces lactis) [TaxId: 28985]
(8)
1a
d3o1wa1
A:2-223
1b
d3o1wa2
A:224-485
1c
d3o1wb1
B:2-223
1d
d3o1wb2
B:224-485
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CATH Domains
(0, 0)
Info
all CATH domains
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Sorry, no Info available
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Pfam Domains
(2, 4)
Info
all PFAM domains
1a: PFAM_Hexokinase_1_3o1wB01 (B:21-222)
1b: PFAM_Hexokinase_1_3o1wB02 (B:21-222)
2a: PFAM_Hexokinase_2_3o1wB03 (B:224-472)
2b: PFAM_Hexokinase_2_3o1wB04 (B:224-472)
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Organisms
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Clan
:
Actin_ATPase
(173)
Family
:
Hexokinase_1
(12)
Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) (Yea
(8)
1a
Hexokinase_1-3o1wB01
B:21-222
1b
Hexokinase_1-3o1wB02
B:21-222
Family
:
Hexokinase_2
(12)
Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) (Yea
(8)
2a
Hexokinase_2-3o1wB03
B:224-472
2b
Hexokinase_2-3o1wB04
B:224-472
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Asymmetric Unit 1
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Asym.Unit (338 KB)
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