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3NXQ
Biol. Unit 1
Info
Asym.Unit (426 KB)
Biol.Unit 1 (210 KB)
Biol.Unit 2 (211 KB)
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(1)
Title
:
ANGIOTENSIN CONVERTING ENZYME N DOMAIN GLYCSOYLATION MUTANT (NDOM389) IN COMPLEX WITH RXP407
Authors
:
C. S. Anthony, H. R. Corradi, S. L. U. Schwager, P. Redelinghuys, D. Geor V. Dive, K. R. Acharya, E. D. Sturrock
Date
:
14 Jul 10 (Deposition) - 08 Sep 10 (Release) - 19 Jan 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.99
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Keywords
:
Dicarboxy Zinc Metallopeptidase, Hydrolase, Hydrolase-Hydrolase Inhibitor Complex
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
C. S. Anthony, H. R. Corradi, S. L. Schwager, P. Redelinghuys, D. Georgiadis, V. Dive, K. R. Acharya, E. D. Sturrock
The N Domain Of Human Angiotensin-I-Converting Enzyme: The Role Of N-Glycosylation And The Crystal Structure In Comple With An N Domain-Specific Phosphinic Inhibitor, Rxp407.
J. Biol. Chem. V. 285 35685 2010
[
close entry info
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Hetero Components
(6, 11)
Info
All Hetero Components
1a: BETA-D-MANNOSE (BMAa)
1b: BETA-D-MANNOSE (BMAb)
2a: CHLORIDE ION (CLa)
2b: CHLORIDE ION (CLb)
3a: ALPHA-L-FUCOSE (FUCa)
3b: ALPHA-L-FUCOSE (FUCb)
3c: ALPHA-L-FUCOSE (FUCc)
3d: ALPHA-L-FUCOSE (FUCd)
4a: N-ACETYL-D-GLUCOSAMINE (NAGa)
4b: N-ACETYL-D-GLUCOSAMINE (NAGb)
4c: N-ACETYL-D-GLUCOSAMINE (NAGc)
4d: N-ACETYL-D-GLUCOSAMINE (NAGd)
4e: N-ACETYL-D-GLUCOSAMINE (NAGe)
4f: N-ACETYL-D-GLUCOSAMINE (NAGf)
4g: N-ACETYL-D-GLUCOSAMINE (NAGg)
4h: N-ACETYL-D-GLUCOSAMINE (NAGh)
4i: N-ACETYL-D-GLUCOSAMINE (NAGi)
4j: N-ACETYL-D-GLUCOSAMINE (NAGj)
5a: HEXAETHYLENE GLYCOL (P6Ga)
5b: HEXAETHYLENE GLYCOL (P6Gb)
6a: DI(HYDROXYETHYL)ETHER (PEGa)
6b: DI(HYDROXYETHYL)ETHER (PEGb)
7a: TETRAETHYLENE GLYCOL (PG4a)
7b: TETRAETHYLENE GLYCOL (PG4b)
8a: N~2~-ACETYL-N-{(1R)-1-[(S)-[(2S)-3... (RX4a)
8b: N~2~-ACETYL-N-{(1R)-1-[(S)-[(2S)-3... (RX4b)
9a: ZINC ION (ZNa)
9b: ZINC ION (ZNb)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
BMA
1
Ligand/Ion
BETA-D-MANNOSE
2
CL
-1
Ligand/Ion
CHLORIDE ION
3
FUC
2
Ligand/Ion
ALPHA-L-FUCOSE
4
NAG
5
Ligand/Ion
N-ACETYL-D-GLUCOSAMINE
5
P6G
1
Ligand/Ion
HEXAETHYLENE GLYCOL
6
PEG
1
Ligand/Ion
DI(HYDROXYETHYL)ETHER
7
PG4
-1
Ligand/Ion
TETRAETHYLENE GLYCOL
8
RX4
1
Ligand/Ion
N~2~-ACETYL-N-{(1R)-1-[(S)-[(2S)-3-{[(2S)-1-AMINO-1-OXOPROPAN-2-YL]AMINO}-2-METHYL-3-OXOPROPYL](HYDROXY)PHOSPHORYL]-2-PHENYLETHYL}-L-ALPHA-ASPARAGINE
9
ZN
-1
Ligand/Ion
ZINC ION
[
close Hetero Component info
]
Sites
(17, 17)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC8 (SOFTWARE)
15: CC7 (SOFTWARE)
16: CC8 (SOFTWARE)
17: CC9 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
HIS A:361 , HIS A:365 , GLU A:389 , RX4 A:700
BINDING SITE FOR RESIDUE ZN A 650
02
AC2
SOFTWARE
GLN A:259 , HIS A:331 , ALA A:332 , SER A:333 , ALA A:334 , HIS A:361 , GLU A:362 , HIS A:365 , TYR A:369 , ARG A:381 , GLU A:389 , LYS A:489 , PHE A:490 , HIS A:491 , TYR A:498 , TYR A:501 , ZN A:650 , HOH A:656 , HOH A:666 , HOH A:697 , HOH A:707 , HOH A:813
BINDING SITE FOR RESIDUE RX4 A 700
03
AC3
SOFTWARE
ASN A:480 , THR A:482 , FUC A:631 , ARG B:245 , GLU B:596
BINDING SITE FOR RESIDUE NAG A 630
04
AC4
SOFTWARE
NAG A:630 , HOH A:705
BINDING SITE FOR RESIDUE FUC A 631
05
AC5
SOFTWARE
ASN A:45 , THR A:47 , GLU A:49 , ASN A:50 , ARG A:326 , NAG A:633
BINDING SITE FOR RESIDUE NAG A 632
06
AC6
SOFTWARE
NAG A:632 , HOH A:927
BINDING SITE FOR RESIDUE NAG A 633
07
AC7
SOFTWARE
ASN A:416 , PRO A:524 , GLN A:527 , NAG A:635 , FUC A:637
BINDING SITE FOR RESIDUE NAG A 634
08
AC8
SOFTWARE
NAG A:634 , BMA A:636
BINDING SITE FOR RESIDUE NAG A 635
09
AC9
SOFTWARE
GLU A:522 , NAG A:635
BINDING SITE FOR RESIDUE BMA A 636
10
BC1
SOFTWARE
PHE A:10 , SER A:11 , NAG A:634
BINDING SITE FOR RESIDUE FUC A 637
11
BC2
SOFTWARE
PHE A:228 , ARG A:231 , ARG A:235 , VAL A:268 , VAL A:269 , ASN A:588 , HOH A:736
BINDING SITE FOR RESIDUE P6G A 708
12
BC3
SOFTWARE
TYR A:202 , PRO A:497 , ARG A:500 , HOH A:751
BINDING SITE FOR RESIDUE CL A 900
13
BC4
SOFTWARE
ARG A:96 , PHE A:191
BINDING SITE FOR RESIDUE PEG A 706
14
BC8
SOFTWARE
ARG A:245 , GLU A:596 , ASN B:480 , THR B:482 , FUC B:631
BINDING SITE FOR RESIDUE NAG B 630
15
CC7
SOFTWARE
TYR A:465 , ARG B:453 , TYR B:465 , LEU B:466 , HOH B:793
BINDING SITE FOR RESIDUE PG4 B 704
16
CC8
SOFTWARE
GLN A:286 , GLY A:287 , HIS A:292 , GLN B:286 , GLY B:287 , HIS B:292 , P6G B:709
BINDING SITE FOR RESIDUE PG4 B 705
17
CC9
SOFTWARE
ARG A:295 , ILE A:408 , ILE B:408 , PG4 B:705 , HOH B:756
BINDING SITE FOR RESIDUE P6G B 709
[
close Site info
]
SAPs(SNPs)/Variants
(12, 12)
Info
(mutated residues are only available for the asymmetric unit)
All SNPs/Variants
01: VAR_029139 (A125T, chain A, )
02: VAR_029140 (A154T, chain A, )
03: VAR_023430 (Y215C, chain A, )
04: VAR_054000 (R231C, chain A, )
05: VAR_054001 (R231L, chain A, )
06: VAR_011707 (A232S, chain A, )
07: VAR_023431 (P322L, chain A, )
08: VAR_035434 (G325R, chain A, )
09: VAR_029141 (R350Q, chain A, )
10: VAR_029142 (V495A, chain A, )
11: VAR_011708 (R532W, chain A, )
12: VAR_020053 (D563G, chain A, )
View:
Select:
Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
01
UniProt
VAR_029139
A
154
T
ACE_HUMAN
Polymorphism
13306087
A
A
125
T
02
UniProt
VAR_029140
A
183
T
ACE_HUMAN
Polymorphism
12720754
A
A
154
T
03
UniProt
VAR_023430
Y
244
C
ACE_HUMAN
Polymorphism
3730025
A
Y
215
C
04
UniProt
VAR_054000
R
260
C
ACE_HUMAN
Polymorphism
4302
A
R
231
C
05
UniProt
VAR_054001
R
260
L
ACE_HUMAN
Polymorphism
4303
A
R
231
L
06
UniProt
VAR_011707
A
261
S
ACE_HUMAN
Polymorphism
4303
A
A
232
S
07
UniProt
VAR_023431
P
351
L
ACE_HUMAN
Polymorphism
2229839
A
P
322
L
08
UniProt
VAR_035434
G
354
R
ACE_HUMAN
Polymorphism
56394458
A
G
325
R
09
UniProt
VAR_029141
R
379
Q
ACE_HUMAN
Polymorphism
13306085
A
R
350
Q
10
UniProt
VAR_029142
V
524
A
ACE_HUMAN
Polymorphism
12720746
A
V
495
A
11
UniProt
VAR_011708
R
561
W
ACE_HUMAN
Polymorphism
4314
A
R
532
W
12
UniProt
VAR_020053
D
592
G
ACE_HUMAN
Polymorphism
12709426
A
D
563
G
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
[
close SNP/Variant info
]
PROSITE Patterns/Profiles
(1, 1)
Info
All PROSITE Patterns/Profiles
1: ZINC_PROTEASE (A:358-367)
;
View:
Select:
Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
ZINC_PROTEASE
PS00142
Neutral zinc metallopeptidases, zinc-binding region signature.
ACE_HUMAN
387-396
985-994
1
A:358-367
-
-
[
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]
Exons
(0, 0)
Info
All Exons
View:
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All Exon Boundaries
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(1, 2)
Info
All SCOP Domains
1a: SCOP_d3nxqa_ (A:)
1b: SCOP_d3nxqb_ (B:)
View:
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Classes
(
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(
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Folds
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(
)
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(
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(
)
Families
(
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(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
Zincin-like
(701)
Superfamily
:
Metalloproteases (zincins), catalytic domain
(647)
Family
:
automated matches
(37)
Protein domain
:
automated matches
(37)
Human (Homo sapiens) [TaxId: 9606]
(22)
1a
d3nxqa_
A:
1b
d3nxqb_
B:
[
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]
CATH Domains
(0, 0)
Info
all CATH domains
View:
Select:
Label:
Sorry, no Info available
[
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]
Pfam Domains
(0, 0)
Info
all PFAM domains
View:
Select:
Label:
Sorry, no Info available
[
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Atom Selection
(currently selected atoms:
all
)
Protein
Nucleic
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Sidechain
Hetero
Ligand
Solvent
All Atoms
Protein & NOT Variant
Protein & NOT Site
Protein & NOT PROSITE
Chain A
Asymmetric Unit 1
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