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3NWK
Biol. Unit 2
Info
Asym.Unit (321 KB)
Biol.Unit 1 (310 KB)
Biol.Unit 2 (313 KB)
Biol.Unit 3 (157 KB)
Biol.Unit 4 (158 KB)
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Title
:
A SECOND C2221 FORM OF CONCANAVALIN A (CANAVALIA ENSIFORMIS)
Authors
:
L. M. Foroughi, Y. N. Kang, A. J. Matzger
Date
:
09 Jul 10 (Deposition) - 13 Jul 11 (Release) - 05 Jul 17 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.09
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A,C (2x)
Biol. Unit 2: B,D (2x)
Biol. Unit 3: A,C (1x)
Biol. Unit 4: B,D (1x)
Keywords
:
Lectin, Sugar Binding Protein, Glycoprotein, Manganese, Metal-Binding
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
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Reference
:
L. M. Foroughi, Y. N. Kang, A. J. Matzger
Polymer-Induced Heteronucleation For Protein Single Crystal Growth: Structural Elucidation Of Bovine Liver Catalase And Concanavalin A Forms
Cryst. Growth Des. V. 11 1294 2011
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Hetero Components
(1, 12)
Info
All Hetero Components
1a: CALCIUM ION (CAa)
1b: CALCIUM ION (CAb)
1c: CALCIUM ION (CAc)
1d: CALCIUM ION (CAd)
2a: GLYCEROL (GOLa)
2b: GLYCEROL (GOLb)
2c: GLYCEROL (GOLc)
2d: GLYCEROL (GOLd)
2e: GLYCEROL (GOLe)
2f: GLYCEROL (GOLf)
2g: GLYCEROL (GOLg)
2h: GLYCEROL (GOLh)
2i: GLYCEROL (GOLi)
2j: GLYCEROL (GOLj)
2k: GLYCEROL (GOLk)
3a: MANGANESE (II) ION (MNa)
3b: MANGANESE (II) ION (MNb)
3c: MANGANESE (II) ION (MNc)
3d: MANGANESE (II) ION (MNd)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
CA
-1
Ligand/Ion
CALCIUM ION
2
GOL
12
Ligand/Ion
GLYCEROL
3
MN
-1
Ligand/Ion
MANGANESE (II) ION
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Sites
(10, 10)
Info
All Sites
01: AC5 (SOFTWARE)
02: AC6 (SOFTWARE)
03: AC7 (SOFTWARE)
04: AC8 (SOFTWARE)
05: AC9 (SOFTWARE)
06: BC1 (SOFTWARE)
07: BC7 (SOFTWARE)
08: BC8 (SOFTWARE)
09: BC9 (SOFTWARE)
10: CC1 (SOFTWARE)
View:
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No.
Name
Evidence
Residues
Description
01
AC5
SOFTWARE
ASP B:10 , TYR B:12 , ASN B:14 , ASP B:19 , HOH B:244 , HOH B:270
BINDING SITE FOR RESIDUE CA B 238
02
AC6
SOFTWARE
GLU B:8 , ASP B:10 , ASP B:19 , HIS B:24 , HOH B:298 , HOH B:377
BINDING SITE FOR RESIDUE MN B 239
03
AC7
SOFTWARE
TYR B:12 , ASN B:14 , GLY B:98 , LEU B:99 , TYR B:100 , ALA B:207 , ASP B:208 , ARG B:228 , HOH B:387
BINDING SITE FOR RESIDUE GOL B 240
04
AC8
SOFTWARE
SER B:113 , HIS B:180 , HOH B:325 , ASP D:139 , HOH D:289
BINDING SITE FOR RESIDUE GOL B 241
05
AC9
SOFTWARE
ASN B:44 , SER B:201 , ASP B:203 , HOH B:445 , PRO D:13 , ASN D:14 , THR D:15 , ASP D:16 , HOH D:253
BINDING SITE FOR RESIDUE GOL B 242
06
BC1
SOFTWARE
ILE B:221 , SER B:223 , GLY B:224 , HOH B:317
BINDING SITE FOR RESIDUE GOL B 243
07
BC7
SOFTWARE
ASP D:10 , TYR D:12 , ASN D:14 , ASP D:19 , HOH D:287 , HOH D:442
BINDING SITE FOR RESIDUE CA D 238
08
BC8
SOFTWARE
GLU D:8 , ASP D:10 , ASP D:19 , HIS D:24 , HOH D:242 , HOH D:426
BINDING SITE FOR RESIDUE MN D 239
09
BC9
SOFTWARE
TYR D:12 , ASN D:14 , GLY D:98 , LEU D:99 , TYR D:100 , ALA D:207 , ASP D:208 , ARG D:228 , HOH D:279
BINDING SITE FOR RESIDUE GOL D 240
10
CC1
SOFTWARE
ASP B:139 , HOH B:319 , SER D:113 , HIS D:180 , HOH D:320
BINDING SITE FOR RESIDUE GOL D 241
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are only available for the asymmetric unit)
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PROSITE Patterns/Profiles
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Exons
(0, 0)
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All Exons
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All Exon Boundaries
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(1, 4)
Info
All SCOP Domains
1a: SCOP_d3nwka_ (A:)
1b: SCOP_d3nwkb_ (B:)
1c: SCOP_d3nwkc_ (C:)
1d: SCOP_d3nwkd_ (D:)
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Classes
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)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
All beta proteins
(24004)
Fold
:
Concanavalin A-like lectins/glucanases
(797)
Superfamily
:
Concanavalin A-like lectins/glucanases
(797)
Family
:
Legume lectins
(238)
Protein domain
:
Concanavalin A
(59)
Jack bean (Canavalia ensiformis) [TaxId: 3823]
(52)
1a
d3nwka_
A:
1b
d3nwkb_
B:
1c
d3nwkc_
C:
1d
d3nwkd_
D:
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CATH Domains
(0, 0)
Info
all CATH domains
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Sorry, no Info available
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Pfam Domains
(0, 0)
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Protein & NOT Site
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Chain B
Chain D
Asymmetric Unit 1
Asymmetric Unit 2
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Show PDB file:
Asym.Unit (321 KB)
Header - Asym.Unit
Biol.Unit 1 (310 KB)
Header - Biol.Unit 1
Biol.Unit 2 (313 KB)
Header - Biol.Unit 2
Biol.Unit 3 (157 KB)
Header - Biol.Unit 3
Biol.Unit 4 (158 KB)
Header - Biol.Unit 4
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