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Getting 'Biological Unit' information from database.
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Getting 'Exon' information from database.
3NUP
Asym. Unit
Info
Asym.Unit (48 KB)
Biol.Unit 1 (44 KB)
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(1)
Title
:
CDK6 (MONOMERIC) IN COMPLEX WITH INHIBITOR
Authors
:
R Chopra
Date
:
07 Jul 10 (Deposition) - 22 Dec 10 (Release) - 22 Dec 10 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.60
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
Kinase, Protein Kinase, Atp Binding, Phosphorylation, Transferase- Transferase Inhibitor Complex
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
Y. S. Cho, M. Borland, C. Brain, C. H. Chen, H. Cheng, R. Chopra, K. Chung J. Groarke, G. He, Y. Hou, S. Kim, S. Kovats, Y. Lu, M. O'Reilly, J. Shen, T. Smith, G. Trakshel, M. Vogtle, M. Xu, M. Xu, M. J. Sung
4-(Pyrazol-4-Yl)-Pyrimidines As Selective Inhibitors Of Cyclin-Dependent Kinase 4/6.
J. Med. Chem. V. 53 7938 2010
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Hetero Components
(1, 1)
Info
All Hetero Components
1a: 4-[3-(1-METHYLETHYL)-1H-PYRAZOL-4-... (3NUa)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
3NU
1
Ligand/Ion
4-[3-(1-METHYLETHYL)-1H-PYRAZOL-4-YL]-N-(1-METHYLPIPERIDIN-4-YL)PYRIMIDIN-2-AMINE
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Sites
(1, 1)
Info
All Sites
1: AC1 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
ILE A:19 , VAL A:27 , ALA A:41 , LYS A:43 , GLU A:99 , VAL A:101 , ASP A:104 , GLN A:149 , LEU A:152
BINDING SITE FOR RESIDUE 3NU A 900
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SAPs(SNPs)/Variants
(3, 3)
Info
(mutated residues are not available)
All SNPs/Variants
1: VAR_041978 (D110N, chain A, )
2: VAR_072638 (A197T, chain A, )
3: VAR_041979 (P199L, chain A, )
View:
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Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_041978
D
110
N
CDK6_HUMAN
Polymorphism
35654944
A
D
110
N
2
UniProt
VAR_072638
A
197
T
CDK6_HUMAN
Disease (MCPH12)
---
A
A
197
T
3
UniProt
VAR_041979
P
199
L
CDK6_HUMAN
Unclassified
---
A
P
199
L
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(2, 2)
Info
All PROSITE Patterns/Profiles
1: PROTEIN_KINASE_ATP (A:19-43)
2: PROTEIN_KINASE_ST (A:141-153)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
PROTEIN_KINASE_ATP
PS00107
Protein kinases ATP-binding region signature.
CDK6_HUMAN
19-43
1
A:19-43
2
PROTEIN_KINASE_ST
PS00108
Serine/Threonine protein kinases active-site signature.
CDK6_HUMAN
141-153
1
A:141-153
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Exons
(7, 7)
Info
All Exons
Exon 1.4b (A:12-78 (gaps))
Exon 1.5 (A:78-123 (gaps))
Exon 1.6a (A:124-166)
Exon 1.7a (A:181-216)
Exon 1.8 (A:216-233)
Exon 1.9b (A:233-278 (gaps))
Exon 1.10c (A:279-300)
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All Exon Boundaries
1: Boundary 1.3/1.4b
2: Boundary 1.4b/1.5
3: Boundary 1.5/1.6a
4: Boundary 1.6a/1.7a
5: Boundary 1.7a/1.8
6: Boundary 1.8/1.9b
7: Boundary 1.9b/1.10c
8: Boundary 1.10c/-
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.3
ENST00000265734
3
ENSE00001337042
chr7:
92463231-92463187
45
CDK6_HUMAN
-
0
0
-
-
1.4b
ENST00000265734
4b
ENSE00001132651
chr7:
92463004-92462405
600
CDK6_HUMAN
1-78
78
1
A:12-78 (gaps)
67
1.5
ENST00000265734
5
ENSE00000877375
chr7:
92404145-92404010
136
CDK6_HUMAN
78-123
46
1
A:78-123 (gaps)
46
1.6a
ENST00000265734
6a
ENSE00000877376
chr7:
92355107-92354940
168
CDK6_HUMAN
124-179
56
1
A:124-166
43
1.7a
ENST00000265734
7a
ENSE00001764561
chr7:
92300849-92300740
110
CDK6_HUMAN
180-216
37
1
A:181-216
36
1.8
ENST00000265734
8
ENSE00000705202
chr7:
92252400-92252350
51
CDK6_HUMAN
216-233
18
1
A:216-233
18
1.9b
ENST00000265734
9b
ENSE00000705199
chr7:
92247521-92247386
136
CDK6_HUMAN
233-278
46
1
A:233-278 (gaps)
46
1.10c
ENST00000265734
10c
ENSE00001132644
chr7:
92244600-92234235
10366
CDK6_HUMAN
279-326
48
1
A:279-300
22
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SCOP Domains
(1, 1)
Info
All SCOP Domains
1a: SCOP_d3nupa_ (A:)
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(
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(
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)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
Protein kinase-like (PK-like)
(2589)
Superfamily
:
Protein kinase-like (PK-like)
(2589)
Family
:
Protein kinases, catalytic subunit
(1977)
Protein domain
:
Cyclin-dependent PK, CDK6
(11)
Human (Homo sapiens) [TaxId: 9606]
(11)
1a
d3nupa_
A:
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CATH Domains
(0, 0)
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all CATH domains
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Sorry, no Info available
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Pfam Domains
(0, 0)
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Chain A
Asymmetric Unit 1
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