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3NT3
Biol. Unit 6
Info
Asym.Unit (317 KB)
Biol.Unit 1 (82 KB)
Biol.Unit 2 (81 KB)
Biol.Unit 3 (81 KB)
Biol.Unit 4 (80 KB)
Biol.Unit 5 (159 KB)
Biol.Unit 6 (156 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF LSSMKATE2 RED FLUORESCENT PROTEINS WITH LARGE STOKES SHIFT
Authors
:
V. N. Malashkevich, K. Piatkevich, S. C. Almo, V. Verkhusha
Date
:
02 Jul 10 (Deposition) - 18 Aug 10 (Release) - 15 Sep 10 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.50
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Biol. Unit 3: C (1x)
Biol. Unit 4: D (1x)
Biol. Unit 5: A,B (1x)
Biol. Unit 6: C,D (1x)
Keywords
:
Large Stokes Shift, Site-Directed Mutagenesis, Fluorescent Protein
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Reference
:
K. D. Piatkevich, V. N. Malashkevich, S. C. Almo, V. V. Verkhusha
Engineering Espt Pathways Based On Structural Analysis Of Lssmkate Red Fluorescent Proteins With Large Stokes Shift.
J. Am. Chem. Soc. V. 132 10762 2010
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Hetero Components
(2, 3)
Info
All Hetero Components
1a: GLYCEROL (GOLa)
1b: GLYCEROL (GOLb)
2a: {(4Z)-4-(4-HYDROXYBENZYLIDENE)-2-[... (NRQa)
2b: {(4Z)-4-(4-HYDROXYBENZYLIDENE)-2-[... (NRQb)
2c: {(4Z)-4-(4-HYDROXYBENZYLIDENE)-2-[... (NRQc)
2d: {(4Z)-4-(4-HYDROXYBENZYLIDENE)-2-[... (NRQd)
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No.
Name
Count
Type
Full Name
1
GOL
1
Ligand/Ion
GLYCEROL
2
NRQ
2
Mod. Amino Acid
{(4Z)-4-(4-HYDROXYBENZYLIDENE)-2-[3-(METHYLTHIO)PROPANIMIDOYL]-5-OXO-4,5-DIHYDRO-1H-IMIDAZOL-1-YL}ACETIC ACID
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Sites
(1, 1)
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All Sites
1: AC2 (SOFTWARE)
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Name
Evidence
Residues
Description
1
AC2
SOFTWARE
THR C:144 , ARG C:157 , SER C:158 , ASP C:159 , THR D:144 , SER D:158 , ASP D:159
BINDING SITE FOR RESIDUE GOL C 501
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(0, 0)
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SCOP Domains
(1, 4)
Info
All SCOP Domains
1a: SCOP_d3nt3a_ (A:)
1b: SCOP_d3nt3b_ (B:)
1c: SCOP_d3nt3c_ (C:)
1d: SCOP_d3nt3d_ (D:)
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Alpha and beta proteins (a+b)
(23004)
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GFP-like
(339)
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GFP-like
(339)
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Fluorescent proteins
(271)
Protein domain
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automated matches
(102)
Artificial gene [TaxId: 32630]
(7)
1a
d3nt3a_
A:
1b
d3nt3b_
B:
1c
d3nt3c_
C:
1d
d3nt3d_
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Asymmetric Unit 1
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