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3NO4
Asym. Unit
Info
Asym.Unit (268 KB)
Biol.Unit 1 (515 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF A CREATININE AMIDOHYDROLASE (NPUN_F1913) FROM NOSTOC PUNCTIFORME PCC 73102 AT 2.00 A RESOLUTION
Authors
:
Joint Center For Structural Genomics (Jcsg)
Date
:
24 Jun 10 (Deposition) - 25 Aug 10 (Release) - 25 Aug 10 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.00
Chains
:
Asym. Unit : A,B,C
Biol. Unit 1: A,B,C (2x)
Keywords
:
Structural Genomics, Joint Center For Structural Genomics, Jcsg, Protein Structure Initiative, Psi-2, Hydrolase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
Joint Center For Structural Genomics (Jcsg)
Crystal Structure Of A Creatinine Amidohydrolase (Npun_f1913) From Nostoc Punctiforme Pcc 73102 At 2. 00 A Resolution
To Be Published
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Hetero Components
(5, 35)
Info
All Hetero Components
1a: CHLORIDE ION (CLa)
2a: 1,2-ETHANEDIOL (EDOa)
2b: 1,2-ETHANEDIOL (EDOb)
2c: 1,2-ETHANEDIOL (EDOc)
2d: 1,2-ETHANEDIOL (EDOd)
2e: 1,2-ETHANEDIOL (EDOe)
2f: 1,2-ETHANEDIOL (EDOf)
2g: 1,2-ETHANEDIOL (EDOg)
2h: 1,2-ETHANEDIOL (EDOh)
2i: 1,2-ETHANEDIOL (EDOi)
2j: 1,2-ETHANEDIOL (EDOj)
2k: 1,2-ETHANEDIOL (EDOk)
2l: 1,2-ETHANEDIOL (EDOl)
2m: 1,2-ETHANEDIOL (EDOm)
2n: 1,2-ETHANEDIOL (EDOn)
2o: 1,2-ETHANEDIOL (EDOo)
2p: 1,2-ETHANEDIOL (EDOp)
3a: SELENOMETHIONINE (MSEa)
3b: SELENOMETHIONINE (MSEb)
3c: SELENOMETHIONINE (MSEc)
3d: SELENOMETHIONINE (MSEd)
3e: SELENOMETHIONINE (MSEe)
3f: SELENOMETHIONINE (MSEf)
3g: SELENOMETHIONINE (MSEg)
3h: SELENOMETHIONINE (MSEh)
3i: SELENOMETHIONINE (MSEi)
3j: SELENOMETHIONINE (MSEj)
3k: SELENOMETHIONINE (MSEk)
3l: SELENOMETHIONINE (MSEl)
4a: NICKEL (II) ION (NIa)
4b: NICKEL (II) ION (NIb)
4c: NICKEL (II) ION (NIc)
5a: UNKNOWN LIGAND (UNLa)
5b: UNKNOWN LIGAND (UNLb)
5c: UNKNOWN LIGAND (UNLc)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
CL
1
Ligand/Ion
CHLORIDE ION
2
EDO
16
Ligand/Ion
1,2-ETHANEDIOL
3
MSE
12
Mod. Amino Acid
SELENOMETHIONINE
4
NI
3
Ligand/Ion
NICKEL (II) ION
5
UNL
3
Ligand/Ion
UNKNOWN LIGAND
[
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Sites
(19, 19)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
17: BC8 (SOFTWARE)
18: BC9 (SOFTWARE)
19: CC1 (SOFTWARE)
View:
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No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
HIS A:31 , ASP A:40 , GLU A:172 , HOH A:531 , HOH A:532 , HOH A:645
BINDING SITE FOR RESIDUE NI A 300
02
AC2
SOFTWARE
ASP A:91 , THR A:94 , HOH A:454 , HOH A:584 , HOH A:610 , LEU B:69 , HOH C:417
BINDING SITE FOR RESIDUE EDO A 401
03
AC3
SOFTWARE
GLN A:142 , ARG A:198 , TYR A:200 , PHE A:244 , HOH A:474
BINDING SITE FOR RESIDUE EDO A 403
04
AC4
SOFTWARE
LEU A:69 , HOH A:509 , HOH A:562 , HOH A:585 , THR B:94 , CYS B:95 , HOH B:665 , HOH B:733
BINDING SITE FOR RESIDUE EDO A 404
05
AC5
SOFTWARE
HIS B:31 , ASP B:40 , GLU B:172 , HOH B:736 , HOH B:739 , HOH B:742
BINDING SITE FOR RESIDUE NI B 300
06
AC6
SOFTWARE
HOH A:620 , GLY B:0 , MSE B:1 , ALA B:49 , GLY B:52 , ASP B:53
BINDING SITE FOR RESIDUE EDO B 402
07
AC7
SOFTWARE
ALA B:144 , ASN B:145
BINDING SITE FOR RESIDUE EDO B 405
08
AC8
SOFTWARE
ASP A:130 , LEU A:131 , ASP B:130 , LEU B:131 , GLN B:132 , ASP C:130 , GLN C:132
BINDING SITE FOR RESIDUE EDO B 406
09
AC9
SOFTWARE
GLN B:142 , VAL B:143
BINDING SITE FOR RESIDUE EDO B 408
10
BC1
SOFTWARE
GLN B:16 , LYS B:19 , ALA B:99 , GLY B:100 , HOH B:756 , HOH B:798
BINDING SITE FOR RESIDUE EDO B 409
11
BC2
SOFTWARE
GLN B:142 , GLU B:243 , PHE B:244 , HOH B:808 , ARG C:198 , TYR C:200
BINDING SITE FOR RESIDUE EDO B 410
12
BC3
SOFTWARE
LYS B:235 , HOH B:591 , SER C:190 , PRO C:191
BINDING SITE FOR RESIDUE EDO B 411
13
BC4
SOFTWARE
GLN A:132 , HOH A:445 , LEU B:131 , GLN B:132 , HOH B:788
BINDING SITE FOR RESIDUE EDO B 412
14
BC5
SOFTWARE
HIS C:31 , ASP C:40 , GLU C:172 , HOH C:909 , HOH C:911 , HOH C:913
BINDING SITE FOR RESIDUE NI C 300
15
BC6
SOFTWARE
HOH B:677 , HOH B:818 , LEU C:69 , ASP C:91 , THR C:94 , HOH C:777 , HOH C:843 , HOH C:901
BINDING SITE FOR RESIDUE EDO C 407
16
BC7
SOFTWARE
LYS C:118 , GLN C:142 , VAL C:143 , HOH C:866 , HOH C:961 , HOH C:965
BINDING SITE FOR RESIDUE EDO C 413
17
BC8
SOFTWARE
THR C:72 , ALA C:73 , PRO C:75 , LYS C:98 , ALA C:99 , HOH C:941 , HOH C:989
BINDING SITE FOR RESIDUE EDO C 414
18
BC9
SOFTWARE
GLY C:0 , ALA C:49 , GLY C:52 , ASP C:53 , VAL C:59
BINDING SITE FOR RESIDUE EDO C 415
19
CC1
SOFTWARE
ALA C:144 , ASN C:145 , HOH C:976
BINDING SITE FOR RESIDUE EDO C 416
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
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Sorry, no Info available
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PROSITE Patterns/Profiles
(0, 0)
Info
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Sorry, no Info available
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Exons
(0, 0)
Info
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(0, 0)
Info
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CATH Domains
(0, 0)
Info
all CATH domains
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Sorry, no Info available
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Pfam Domains
(1, 3)
Info
all PFAM domains
1a: PFAM_Creatininase_3no4C01 (C:3-241)
1b: PFAM_Creatininase_3no4C02 (C:3-241)
1c: PFAM_Creatininase_3no4C03 (C:3-241)
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Clans
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Organisms
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(
)
Clan
:
no clan defined [family: Creatininase]
(2)
Family
:
Creatininase
(2)
Nostoc punctiforme (strain ATCC 29133 / PCC 73102)
(1)
1a
Creatininase-3no4C01
C:3-241
1b
Creatininase-3no4C02
C:3-241
1c
Creatininase-3no4C03
C:3-241
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Asymmetric Unit 1
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select all 'ALA' residues (Alanines) in chain 'A'
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select residue range 5 to 10 in all chains
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select residue range 5 to 10 in chain 'A'
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Asym.Unit (268 KB)
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